RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 NBPF1Q3BBV0 1214 aa15.12■□□□□ 0.01
EBF1-201ENST00000313708 CFAP53Q96M91 514 aa15.11■□□□□ 0.01
EBF1-201ENST00000313708 NRDCO43847 1150 aa15.11■□□□□ 0.01
EBF1-201ENST00000313708 TERF1P54274 439 aa15.11■□□□□ 0.01
EBF1-201ENST00000313708 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
EBF1-201ENST00000313708 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
EBF1-201ENST00000313708 FSD2A1L4K1 749 aa15.1■□□□□ 0.01
EBF1-201ENST00000313708 ZRSR1Q15695 479 aaKnown RBP15.1■□□□□ 0.01
EBF1-201ENST00000313708 FAM177BA6PVY3 158 aa15.1■□□□□ 0.01
EBF1-201ENST00000313708 APBB1O00213 710 aa15.1■□□□□ 0.01
EBF1-201ENST00000313708 TIGD1Q96MW7 591 aa15.1■□□□□ 0.01
EBF1-201ENST00000313708 SYCE3A1L190 88 aa15.1■□□□□ 0.01
EBF1-201ENST00000313708 MCM5P33992 734 aa15.1■□□□□ 0.01
EBF1-201ENST00000313708 CFAP44Q96MT7 982 aa15.1■□□□□ 0.01
EBF1-201ENST00000313708 ZKSCAN5Q9Y2L8 839 aa15.1■□□□□ 0.01
EBF1-201ENST00000313708 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
EBF1-201ENST00000313708 ERBB4Q15303 1308 aa15.09■□□□□ 0.01
EBF1-201ENST00000313708 SSFA2P28290 1259 aa15.09■□□□□ 0.01
EBF1-201ENST00000313708 ANKRD45Q5TZF3 282 aa15.08■□□□□ 0.01
EBF1-201ENST00000313708 CALCOCO1Q9P1Z2 691 aa15.08■□□□□ 0.01
EBF1-201ENST00000313708 K7ELQ4 463 aaPredicted RBP15.08■□□□□ 0.01
EBF1-201ENST00000313708 MCCP23508 829 aa15.08■□□□□ 0
EBF1-201ENST00000313708 FGD6Q6ZV73 1430 aa15.08■□□□□ 0
EBF1-201ENST00000313708 IGHDP01880 384 aa15.08■□□□□ 0
EBF1-201ENST00000313708 UTP14CQ5TAP6 766 aaKnown RBP15.08■□□□□ 0
EBF1-201ENST00000313708 FHOD3Q2V2M9 1422 aa15.08■□□□□ 0
EBF1-201ENST00000313708 LNPKQ9C0E8 428 aa15.08■□□□□ 0
EBF1-201ENST00000313708 PRIMPOLQ96LW4 560 aa15.07■□□□□ 0
EBF1-201ENST00000313708 SPC24Q8NBT2 197 aa15.07■□□□□ 0
EBF1-201ENST00000313708 GPS2Q13227 327 aa15.06■□□□□ 0
EBF1-201ENST00000313708 TSPYL1Q9H0U9 437 aa15.06■□□□□ 0
EBF1-201ENST00000313708 NPHP1O15259 732 aa15.06■□□□□ 0
EBF1-201ENST00000313708 TSPY4P0CV99 314 aa15.06■□□□□ 0
EBF1-201ENST00000313708 TSPY10P0CW01 314 aa15.06■□□□□ 0
EBF1-201ENST00000313708 ZKSCAN2Q63HK3 967 aa15.05■□□□□ -0
EBF1-201ENST00000313708 PDE3AQ14432 1141 aa15.05■□□□□ -0
EBF1-201ENST00000313708 NOM1Q5C9Z4 860 aaKnown RBP15.05■□□□□ -0
EBF1-201ENST00000313708 MBD3O95983 291 aa15.04■□□□□ -0
EBF1-201ENST00000313708 NOL7Q9UMY1 257 aaKnown RBP15.04■□□□□ -0
EBF1-201ENST00000313708 IPO8O15397 1037 aaKnown RBP15.04■□□□□ -0
EBF1-201ENST00000313708 TRIM6-TRIM34B2RNG4 842 aa15.04■□□□□ -0
EBF1-201ENST00000313708 TRIM34Q9BYJ4 488 aa15.04■□□□□ -0
EBF1-201ENST00000313708 TPD52L1Q16890 204 aaPredicted RBP15.03■□□□□ -0
EBF1-201ENST00000313708 KLHL40Q2TBA0 621 aa15.03■□□□□ -0
EBF1-201ENST00000313708 ZSCAN23Q3MJ62 389 aa15.03■□□□□ -0
EBF1-201ENST00000313708 HS1BP3Q53T59 392 aa15.03■□□□□ -0
EBF1-201ENST00000313708 TSC1Q92574 1164 aa15.03■□□□□ -0
EBF1-201ENST00000313708 ZNF830Q96NB3 372 aaPredicted RBP15.02■□□□□ -0
EBF1-201ENST00000313708 CWC15Q9P013 229 aaKnown RBP15.02■□□□□ -0
EBF1-201ENST00000313708 KDM2BQ8NHM5 1336 aa15.02■□□□□ -0
EBF1-201ENST00000313708 RIPK4P57078 832 aa15.02■□□□□ -0
EBF1-201ENST00000313708 CCDC112Q8NEF3 446 aa15.02■□□□□ -0
EBF1-201ENST00000313708 PRDM4Q9UKN5 801 aa15.02■□□□□ -0
EBF1-201ENST00000313708 RBM27Q9P2N5 1060 aaKnown RBP15.02□□□□□ -0.01
EBF1-201ENST00000313708 PEG3Q9GZU2 1588 aa15.02□□□□□ -0.01
EBF1-201ENST00000313708 DZIP1LQ8IYY4 767 aaKnown RBP15.01□□□□□ -0.01
EBF1-201ENST00000313708 STAC3Q96MF2 364 aa15.01□□□□□ -0.01
EBF1-201ENST00000313708 TPM3P06753 285 aa15□□□□□ -0.01
EBF1-201ENST00000313708 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
EBF1-201ENST00000313708 GAS2L3Q86XJ1 694 aa15□□□□□ -0.01
EBF1-201ENST00000313708 HFM1A2PYH4 1435 aa15□□□□□ -0.01
EBF1-201ENST00000313708 BAG4O95429 457 aaKnown RBP15□□□□□ -0.01
EBF1-201ENST00000313708 NCOA2Q15596 1464 aa14.99□□□□□ -0.01
EBF1-201ENST00000313708 U2AF2P26368 475 aaKnown RBP eCLIP14.99□□□□□ -0.01
EBF1-201ENST00000313708 GPATCH11Q8N954 259 aa14.99□□□□□ -0.01
EBF1-201ENST00000313708 NOLC1Q14978 699 aaKnown RBP eCLIP14.99□□□□□ -0.01
EBF1-201ENST00000313708 CERS3Q8IU89 383 aa14.99□□□□□ -0.01
EBF1-201ENST00000313708 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
EBF1-201ENST00000313708 MORC1Q86VD1 984 aa14.98□□□□□ -0.01
EBF1-201ENST00000313708 DDX19BQ9UMR2 479 aa14.98□□□□□ -0.01
EBF1-201ENST00000313708 CHMP3Q9Y3E7 222 aa14.98□□□□□ -0.01
EBF1-201ENST00000313708 PRIM1P49642 420 aaKnown RBP14.97□□□□□ -0.01
EBF1-201ENST00000313708 GNL2Q13823 731 aaKnown RBP14.97□□□□□ -0.01
EBF1-201ENST00000313708 PATL2C9JE40 543 aaKnown RBP14.97□□□□□ -0.01
EBF1-201ENST00000313708 MYRIPQ8NFW9 859 aa14.97□□□□□ -0.01
EBF1-201ENST00000313708 SETQ01105 290 aaPredicted RBP14.97□□□□□ -0.01
EBF1-201ENST00000313708 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
EBF1-201ENST00000313708 GTF2F1P35269 517 aaKnown RBP eCLIP14.97□□□□□ -0.01
EBF1-201ENST00000313708 USP25Q9UHP3 1055 aa14.97□□□□□ -0.01
EBF1-201ENST00000313708 GTF2E1P29083 439 aaPredicted RBP14.96□□□□□ -0.01
EBF1-201ENST00000313708 ARGLU1Q9NWB6 273 aaPredicted RBP14.96□□□□□ -0.01
EBF1-201ENST00000313708 DUSP27Q5VZP5 1158 aa14.96□□□□□ -0.02
EBF1-201ENST00000313708 SLFN5Q08AF3 891 aa14.95□□□□□ -0.02
EBF1-201ENST00000313708 GTF2A1P52655 376 aaPredicted RBP14.95□□□□□ -0.02
EBF1-201ENST00000313708 PPP1R9BQ96SB3 815 aa14.95□□□□□ -0.02
EBF1-201ENST00000313708 U2AF1L5P0DN76 240 aaPredicted RBP14.95□□□□□ -0.02
EBF1-201ENST00000313708 U2AF1Q01081 240 aaKnown RBP eCLIP14.95□□□□□ -0.02
EBF1-201ENST00000313708 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
EBF1-201ENST00000313708 CCAR2Q8N163 923 aaKnown RBP14.94□□□□□ -0.02
EBF1-201ENST00000313708 RBSNQ9H1K0 784 aa14.94□□□□□ -0.02
EBF1-201ENST00000313708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
EBF1-201ENST00000313708 ANKRD30AQ9BXX3 1397 aa14.94□□□□□ -0.02
EBF1-201ENST00000313708 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
EBF1-201ENST00000313708 RABEP1Q15276 862 aa14.94□□□□□ -0.02
EBF1-201ENST00000313708 RAB3GAP1Q15042 981 aa14.94□□□□□ -0.02
EBF1-201ENST00000313708 OGFRQ9NZT2 677 aa14.94□□□□□ -0.02
EBF1-201ENST00000313708 AEBP2Q6ZN18 517 aaPredicted RBP14.93□□□□□ -0.02
EBF1-201ENST00000313708 GOLGA6L19H0YKK7 550 aa14.93□□□□□ -0.02
EBF1-201ENST00000313708 CDC45O75419 566 aa14.93□□□□□ -0.02
EBF1-201ENST00000313708 CHGAP10645 457 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms