RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 IPO4Q8TEX9 1081 aaKnown RBP15.48■□□□□ 0.07
LAMA3-202ENST00000313654 OLFM4Q6UX06 510 aa15.48■□□□□ 0.07
LAMA3-202ENST00000313654 SPATA24Q86W54 205 aa15.48■□□□□ 0.07
LAMA3-202ENST00000313654 SYNE3Q6ZMZ3 975 aa15.47■□□□□ 0.07
LAMA3-202ENST00000313654 PAF1Q8N7H5 531 aa15.47■□□□□ 0.07
LAMA3-202ENST00000313654 SPAG9O60271 1321 aaKnown RBP15.47■□□□□ 0.07
LAMA3-202ENST00000313654 SLC4A10Q6U841 1118 aa15.47■□□□□ 0.07
LAMA3-202ENST00000313654 SLC26A8Q96RN1 970 aa15.47■□□□□ 0.07
LAMA3-202ENST00000313654 SMC2O95347 1197 aa15.46■□□□□ 0.07
LAMA3-202ENST00000313654 HMGN5P82970 282 aaKnown RBP15.46■□□□□ 0.07
LAMA3-202ENST00000313654 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
LAMA3-202ENST00000313654 TMF1P82094 1093 aa15.45■□□□□ 0.06
LAMA3-202ENST00000313654 ANO2Q9NQ90 1003 aa15.45■□□□□ 0.06
LAMA3-202ENST00000313654 RRP9O43818 475 aaKnown RBP15.45■□□□□ 0.06
LAMA3-202ENST00000313654 CCDC73Q6ZRK6 1079 aa15.45■□□□□ 0.06
LAMA3-202ENST00000313654 CLIP1P30622 1438 aa15.45■□□□□ 0.06
LAMA3-202ENST00000313654 TRIM34Q9BYJ4 488 aa15.45■□□□□ 0.06
LAMA3-202ENST00000313654 FAM161AQ3B820 660 aa15.44■□□□□ 0.06
LAMA3-202ENST00000313654 CPLX1O14810 134 aa15.44■□□□□ 0.06
LAMA3-202ENST00000313654 UQCRHLA0A096LP55 91 aa15.44■□□□□ 0.06
LAMA3-202ENST00000313654 UQCRHP07919 91 aa15.44■□□□□ 0.06
LAMA3-202ENST00000313654 SRPK2P78362 688 aaKnown RBP15.44■□□□□ 0.06
LAMA3-202ENST00000313654 LRRCC1Q9C099 1032 aa15.44■□□□□ 0.06
LAMA3-202ENST00000313654 DDX11Q96FC9 970 aa15.43■□□□□ 0.06
LAMA3-202ENST00000313654 CCDC146Q8IYE0 955 aa15.43■□□□□ 0.06
LAMA3-202ENST00000313654 VPS37CA5D8V6 355 aaPredicted RBP15.43■□□□□ 0.06
LAMA3-202ENST00000313654 CTDP1Q9Y5B0 961 aaPredicted RBP15.43■□□□□ 0.06
LAMA3-202ENST00000313654 TRIM5Q9C035 493 aa15.43■□□□□ 0.06
LAMA3-202ENST00000313654 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
LAMA3-202ENST00000313654 CCER2I3L3R5 266 aa15.43■□□□□ 0.06
LAMA3-202ENST00000313654 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
LAMA3-202ENST00000313654 RABEP1Q15276 862 aa15.42■□□□□ 0.06
LAMA3-202ENST00000313654 HDAC5Q9UQL6 1122 aa15.41■□□□□ 0.06
LAMA3-202ENST00000313654 CENPJQ9HC77 1338 aaPredicted RBP15.41■□□□□ 0.06
LAMA3-202ENST00000313654 DHX16O60231 1041 aaKnown RBP15.4■□□□□ 0.06
LAMA3-202ENST00000313654 SMARCE1Q969G3 411 aa15.4■□□□□ 0.06
LAMA3-202ENST00000313654 U2AF1L5P0DN76 240 aaPredicted RBP15.4■□□□□ 0.06
LAMA3-202ENST00000313654 U2AF1Q01081 240 aaKnown RBP eCLIP15.4■□□□□ 0.06
LAMA3-202ENST00000313654 CLUAP1Q96AJ1 413 aa15.4■□□□□ 0.06
LAMA3-202ENST00000313654 PRDM10Q9NQV6 1147 aa15.4■□□□□ 0.06
LAMA3-202ENST00000313654 ERLIN1O75477 346 aa15.39■□□□□ 0.05
LAMA3-202ENST00000313654 CFAP57Q96MR6 1250 aa15.39■□□□□ 0.05
LAMA3-202ENST00000313654 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
LAMA3-202ENST00000313654 REC8O95072 547 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 NFXL1Q6ZNB6 911 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
LAMA3-202ENST00000313654 E9PSI1 815 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 CHMP4AQ9BY43 222 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 PDE4AP27815 886 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 RNF214Q8ND24 703 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 CPLX2Q6PUV4 134 aaKnown RBP15.38■□□□□ 0.05
LAMA3-202ENST00000313654 CCDC102AQ96A19 550 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 SPC24Q8NBT2 197 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 CFAP45Q9UL16 551 aa15.38■□□□□ 0.05
LAMA3-202ENST00000313654 AMOTL1Q8IY63 956 aa15.37■□□□□ 0.05
LAMA3-202ENST00000313654 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
LAMA3-202ENST00000313654 CCDC91Q7Z6B0 441 aa15.37■□□□□ 0.05
LAMA3-202ENST00000313654 CCDC97Q96F63 343 aaPredicted RBP15.37■□□□□ 0.05
LAMA3-202ENST00000313654 MRE11P49959 708 aa15.37■□□□□ 0.05
LAMA3-202ENST00000313654 CCDC112Q8NEF3 446 aa15.36■□□□□ 0.05
LAMA3-202ENST00000313654 SAFB2Q14151 953 aaKnown RBP eCLIP15.36■□□□□ 0.05
LAMA3-202ENST00000313654 FANCIQ9NVI1 1328 aa15.36■□□□□ 0.05
LAMA3-202ENST00000313654 CCDC175P0C221 793 aa15.36■□□□□ 0.05
LAMA3-202ENST00000313654 CCDC181Q5TID7 509 aa15.36■□□□□ 0.05
LAMA3-202ENST00000313654 CENPQQ7L2Z9 268 aaPredicted RBP15.36■□□□□ 0.05
LAMA3-202ENST00000313654 EEA1Q15075 1411 aa15.35■□□□□ 0.05
LAMA3-202ENST00000313654 ANKRD45Q5TZF3 282 aa15.35■□□□□ 0.05
LAMA3-202ENST00000313654 EIF3AQ14152 1382 aaKnown RBP15.35■□□□□ 0.05
LAMA3-202ENST00000313654 ZKSCAN1P17029 563 aaPredicted RBP15.35■□□□□ 0.05
LAMA3-202ENST00000313654 TSPY26PQ9H489 355 aa15.35■□□□□ 0.05
LAMA3-202ENST00000313654 NOL10Q9BSC4 688 aaKnown RBP15.35■□□□□ 0.05
LAMA3-202ENST00000313654 SYCP1Q15431 976 aa15.35■□□□□ 0.05
LAMA3-202ENST00000313654 MAGEC2Q9UBF1 373 aaPredicted RBP15.35■□□□□ 0.05
LAMA3-202ENST00000313654 CGNQ9P2M7 1197 aaKnown RBP15.34■□□□□ 0.05
LAMA3-202ENST00000313654 BRPF1P55201 1214 aaPredicted RBP15.34■□□□□ 0.05
LAMA3-202ENST00000313654 DDX23Q9BUQ8 820 aaKnown RBP15.34■□□□□ 0.05
LAMA3-202ENST00000313654 SAFBQ15424 915 aaKnown RBP eCLIP15.34■□□□□ 0.05
LAMA3-202ENST00000313654 SHTN1A0MZ66 631 aa15.34■□□□□ 0.05
LAMA3-202ENST00000313654 PUS7Q96PZ0 661 aaKnown RBP15.33■□□□□ 0.05
LAMA3-202ENST00000313654 SMC3Q9UQE7 1217 aa15.33■□□□□ 0.04
LAMA3-202ENST00000313654 SEPT6Q14141 434 aa15.33■□□□□ 0.04
LAMA3-202ENST00000313654 LRRFIP1Q32MZ4 808 aaKnown RBP15.33■□□□□ 0.04
LAMA3-202ENST00000313654 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.04
LAMA3-202ENST00000313654 STAMBPO95630 424 aa15.33■□□□□ 0.04
LAMA3-202ENST00000313654 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
LAMA3-202ENST00000313654 PPM1EQ8WY54 764 aa15.32■□□□□ 0.04
LAMA3-202ENST00000313654 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
LAMA3-202ENST00000313654 MAP2K1Q02750 393 aaPredicted RBP15.32■□□□□ 0.04
LAMA3-202ENST00000313654 CAVIN1Q6NZI2 390 aaKnown RBP15.32■□□□□ 0.04
LAMA3-202ENST00000313654 CHMP5Q9NZZ3 219 aa15.31■□□□□ 0.04
LAMA3-202ENST00000313654 LRRFIP2Q9Y608 721 aaKnown RBP15.31■□□□□ 0.04
LAMA3-202ENST00000313654 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
LAMA3-202ENST00000313654 IL27Q8NEV9 243 aa15.31■□□□□ 0.04
LAMA3-202ENST00000313654 ZNHIT6Q9NWK9 470 aaKnown RBP15.31■□□□□ 0.04
LAMA3-202ENST00000313654 RNF20Q5VTR2 975 aa15.31■□□□□ 0.04
LAMA3-202ENST00000313654 KIF3BO15066 747 aa15.31■□□□□ 0.04
LAMA3-202ENST00000313654 TMEM132AQ24JP5 1023 aa15.31■□□□□ 0.04
LAMA3-202ENST00000313654 NUCB2P80303 420 aa15.3■□□□□ 0.04
LAMA3-202ENST00000313654 SDF4Q9BRK5 362 aa15.3■□□□□ 0.04
LAMA3-202ENST00000313654 ZFP91Q96JP5 570 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms