RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NSD2O96028 1365 aa10.88□□□□□ -0.67
COL6A5-202ENST00000312481 STK31Q9BXU1 1019 aa10.87□□□□□ -0.67
COL6A5-202ENST00000312481 FGD1P98174 961 aa10.87□□□□□ -0.67
COL6A5-202ENST00000312481 TPM2P07951 284 aa10.87□□□□□ -0.67
COL6A5-202ENST00000312481 MYO5CQ9NQX4 1742 aa10.87□□□□□ -0.67
COL6A5-202ENST00000312481 DNMT1P26358 1616 aaKnown RBP10.87□□□□□ -0.67
COL6A5-202ENST00000312481 ARHGAP5Q13017 1502 aa10.87□□□□□ -0.67
COL6A5-202ENST00000312481 ZMYM3Q14202 1370 aa10.87□□□□□ -0.67
COL6A5-202ENST00000312481 C9orf84Q5VXU9 1444 aa10.87□□□□□ -0.67
COL6A5-202ENST00000312481 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
COL6A5-202ENST00000312481 PKNOX2Q96KN3 472 aa10.86□□□□□ -0.67
COL6A5-202ENST00000312481 HSP90AB4PQ58FF6 505 aa10.86□□□□□ -0.67
COL6A5-202ENST00000312481 RPRD2Q5VT52 1461 aaKnown RBP10.86□□□□□ -0.67
COL6A5-202ENST00000312481 CHMP5Q9NZZ3 219 aa10.86□□□□□ -0.67
COL6A5-202ENST00000312481 PRKCSHP14314 528 aaPredicted RBP10.86□□□□□ -0.67
COL6A5-202ENST00000312481 AEBP2Q6ZN18 517 aaPredicted RBP10.85□□□□□ -0.67
COL6A5-202ENST00000312481 PDCP20941 246 aa10.85□□□□□ -0.67
COL6A5-202ENST00000312481 CCDC70Q6NSX1 233 aa10.85□□□□□ -0.67
COL6A5-202ENST00000312481 RGS3P49796 1198 aa10.85□□□□□ -0.67
COL6A5-202ENST00000312481 PLEKHH1Q9ULM0 1364 aa10.85□□□□□ -0.67
COL6A5-202ENST00000312481 MRE11P49959 708 aa10.84□□□□□ -0.67
COL6A5-202ENST00000312481 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
COL6A5-202ENST00000312481 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
COL6A5-202ENST00000312481 PTPRGP23470 1445 aa10.84□□□□□ -0.67
COL6A5-202ENST00000312481 HSP90AA2PQ14568 343 aaPredicted RBP10.84□□□□□ -0.67
COL6A5-202ENST00000312481 ATAD2Q6PL18 1390 aa10.84□□□□□ -0.67
COL6A5-202ENST00000312481 KDM5AP29375 1690 aaKnown RBP10.84□□□□□ -0.67
COL6A5-202ENST00000312481 ABCC11Q96J66 1382 aa10.83□□□□□ -0.67
COL6A5-202ENST00000312481 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
COL6A5-202ENST00000312481 FAM184AQ8NB25 1140 aa10.83□□□□□ -0.68
COL6A5-202ENST00000312481 UGGT2Q9NYU1 1516 aa10.83□□□□□ -0.68
COL6A5-202ENST00000312481 DIAPH3Q9NSV4 1193 aa10.83□□□□□ -0.68
COL6A5-202ENST00000312481 PDE4AP27815 886 aa10.83□□□□□ -0.68
COL6A5-202ENST00000312481 OS9Q13438 667 aaPredicted RBP10.82□□□□□ -0.68
COL6A5-202ENST00000312481 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
COL6A5-202ENST00000312481 UHRF1BP1Q6BDS2 1440 aa10.82□□□□□ -0.68
COL6A5-202ENST00000312481 FRAT1Q92837 279 aaPredicted RBP10.82□□□□□ -0.68
COL6A5-202ENST00000312481 HIP1O00291 1037 aa10.82□□□□□ -0.68
COL6A5-202ENST00000312481 TPM1P09493 284 aa10.82□□□□□ -0.68
COL6A5-202ENST00000312481 TEX35Q5T0J7 233 aa10.82□□□□□ -0.68
COL6A5-202ENST00000312481 RNF20Q5VTR2 975 aa10.81□□□□□ -0.68
COL6A5-202ENST00000312481 RUSC2Q8N2Y8 1516 aa10.81□□□□□ -0.68
COL6A5-202ENST00000312481 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL6A5-202ENST00000312481 ACBD3Q9H3P7 528 aa10.81□□□□□ -0.68
COL6A5-202ENST00000312481 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
COL6A5-202ENST00000312481 NAT10Q9H0A0 1025 aaKnown RBP10.81□□□□□ -0.68
COL6A5-202ENST00000312481 CFAP65Q6ZU64 1925 aaKnown RBP10.81□□□□□ -0.68
COL6A5-202ENST00000312481 CAVIN2O95810 425 aa10.81□□□□□ -0.68
COL6A5-202ENST00000312481 RGL3Q3MIN7 710 aa10.81□□□□□ -0.68
COL6A5-202ENST00000312481 SMC4Q9NTJ3 1288 aa10.81□□□□□ -0.68
COL6A5-202ENST00000312481 NAIPQ13075 1403 aa10.8□□□□□ -0.68
COL6A5-202ENST00000312481 RUNDC1Q96C34 613 aa10.8□□□□□ -0.68
COL6A5-202ENST00000312481 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
COL6A5-202ENST00000312481 SETQ01105 290 aaPredicted RBP10.79□□□□□ -0.68
COL6A5-202ENST00000312481 PDCL2Q8N4E4 241 aa10.79□□□□□ -0.68
COL6A5-202ENST00000312481 DRC7Q8IY82 874 aa10.79□□□□□ -0.68
COL6A5-202ENST00000312481 FAM43AQ8N2R8 423 aa10.79□□□□□ -0.68
COL6A5-202ENST00000312481 NCOA1Q15788 1441 aa10.79□□□□□ -0.68
COL6A5-202ENST00000312481 SAMD9Q5K651 1589 aa10.79□□□□□ -0.68
COL6A5-202ENST00000312481 SHROOM2Q13796 1616 aa10.79□□□□□ -0.68
COL6A5-202ENST00000312481 TXLNBQ8N3L3 684 aa10.79□□□□□ -0.68
COL6A5-202ENST00000312481 TCOF1Q13428 1488 aaKnown RBP10.79□□□□□ -0.68
COL6A5-202ENST00000312481 DUOX2Q9NRD8 1548 aa10.79□□□□□ -0.68
COL6A5-202ENST00000312481 HSP90B1P14625 803 aaKnown RBP10.79□□□□□ -0.68
COL6A5-202ENST00000312481 SRPK2P78362 688 aaKnown RBP10.79□□□□□ -0.68
COL6A5-202ENST00000312481 SALL2Q9Y467 1007 aaPredicted RBP10.79□□□□□ -0.68
COL6A5-202ENST00000312481 CALRP27797 417 aaKnown RBP10.78□□□□□ -0.68
COL6A5-202ENST00000312481 NOM1Q5C9Z4 860 aaKnown RBP10.78□□□□□ -0.68
COL6A5-202ENST00000312481 INTS3Q68E01 1043 aaKnown RBP10.78□□□□□ -0.68
COL6A5-202ENST00000312481 CPLX2Q6PUV4 134 aaKnown RBP10.78□□□□□ -0.68
COL6A5-202ENST00000312481 CC2D1BQ5T0F9 858 aaKnown RBP10.78□□□□□ -0.68
COL6A5-202ENST00000312481 WDR63Q8IWG1 891 aa10.78□□□□□ -0.68
COL6A5-202ENST00000312481 KIF2AO00139 706 aaPredicted RBP10.78□□□□□ -0.68
COL6A5-202ENST00000312481 ARGLU1Q9NWB6 273 aaPredicted RBP10.78□□□□□ -0.68
COL6A5-202ENST00000312481 AK9Q5TCS8 1911 aa10.78□□□□□ -0.68
COL6A5-202ENST00000312481 ITPRIPQ8IWB1 547 aa10.78□□□□□ -0.68
COL6A5-202ENST00000312481 IRX6P78412 446 aaPredicted RBP10.77□□□□□ -0.68
COL6A5-202ENST00000312481 MCM5P33992 734 aa10.77□□□□□ -0.68
COL6A5-202ENST00000312481 ARID3CA6NKF2 412 aa10.77□□□□□ -0.69
COL6A5-202ENST00000312481 MFAP1P55081 439 aaKnown RBP10.77□□□□□ -0.69
COL6A5-202ENST00000312481 U2AF1L5P0DN76 240 aaPredicted RBP10.77□□□□□ -0.69
COL6A5-202ENST00000312481 U2AF1Q01081 240 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL6A5-202ENST00000312481 ZKSCAN1P17029 563 aaPredicted RBP10.77□□□□□ -0.69
COL6A5-202ENST00000312481 RABEP1Q15276 862 aa10.77□□□□□ -0.69
COL6A5-202ENST00000312481 ANKRD20A12PQ8NF67 263 aa10.77□□□□□ -0.69
COL6A5-202ENST00000312481 CCDC39Q9UFE4 941 aa10.77□□□□□ -0.69
COL6A5-202ENST00000312481 SRCIN1Q9C0H9 1055 aa10.76□□□□□ -0.69
COL6A5-202ENST00000312481 NKTRP30414 1462 aaKnown RBP10.76□□□□□ -0.69
COL6A5-202ENST00000312481 GPRASP1Q5JY77 1395 aa10.76□□□□□ -0.69
COL6A5-202ENST00000312481 U2SURPO15042 1029 aaKnown RBP10.76□□□□□ -0.69
COL6A5-202ENST00000312481 GNAI1P63096 354 aa10.76□□□□□ -0.69
COL6A5-202ENST00000312481 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
COL6A5-202ENST00000312481 GCC1Q96CN9 775 aa10.76□□□□□ -0.69
COL6A5-202ENST00000312481 TDRD9Q8NDG6 1382 aaKnown RBP10.76□□□□□ -0.69
COL6A5-202ENST00000312481 GNL2Q13823 731 aaKnown RBP10.76□□□□□ -0.69
COL6A5-202ENST00000312481 CWC15Q9P013 229 aaKnown RBP10.76□□□□□ -0.69
COL6A5-202ENST00000312481 CCDC66A2RUB6 948 aa10.76□□□□□ -0.69
COL6A5-202ENST00000312481 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
COL6A5-202ENST00000312481 RRP9O43818 475 aaKnown RBP10.75□□□□□ -0.69
COL6A5-202ENST00000312481 TSR1Q2NL82 804 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms