RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 NEFLP07196 543 aa27.43■■□□□ 1.98
SSH3-202ENST00000308298 NRXN1Q9ULB1 1477 aa27.43■■□□□ 1.98
SSH3-202ENST00000308298 FKBP8Q14318 412 aa27.43■■□□□ 1.98
SSH3-202ENST00000308298 MYBBP1AQ9BQG0 1328 aaKnown RBP27.42■■□□□ 1.98
SSH3-202ENST00000308298 PPLO60437 1756 aa27.42■■□□□ 1.98
SSH3-202ENST00000308298 ZMYM4Q5VZL5 1548 aa27.42■■□□□ 1.98
SSH3-202ENST00000308298 SIGLEC1Q9BZZ2 1709 aa27.42■■□□□ 1.98
SSH3-202ENST00000308298 YEATS2Q9ULM3 1422 aa27.41■■□□□ 1.98
SSH3-202ENST00000308298 EIF3AQ14152 1382 aaKnown RBP27.41■■□□□ 1.98
SSH3-202ENST00000308298 PER1O15534 1290 aaPredicted RBP27.4■■□□□ 1.98
SSH3-202ENST00000308298 BRD4O60885 1362 aaPredicted RBP27.4■■□□□ 1.98
SSH3-202ENST00000308298 ADGRF5Q8IZF2 1346 aa27.39■■□□□ 1.98
SSH3-202ENST00000308298 PARD3Q8TEW0 1356 aa27.39■■□□□ 1.97
SSH3-202ENST00000308298 FAM69CQ0P6D2 419 aa27.38■■□□□ 1.97
SSH3-202ENST00000308298 NOS1P29475 1434 aa27.38■■□□□ 1.97
SSH3-202ENST00000308298 TMC1Q8TDI8 760 aa27.38■■□□□ 1.97
SSH3-202ENST00000308298 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
SSH3-202ENST00000308298 PIK3C2BO00750 1634 aa27.37■■□□□ 1.97
SSH3-202ENST00000308298 CFAP70Q5T0N1 1121 aa27.35■■□□□ 1.97
SSH3-202ENST00000308298 ARHGAP31Q2M1Z3 1444 aa27.35■■□□□ 1.97
SSH3-202ENST00000308298 SYNMO15061 1565 aa27.35■■□□□ 1.97
SSH3-202ENST00000308298 PNISRQ8TF01 805 aaKnown RBP27.34■■□□□ 1.97
SSH3-202ENST00000308298 PANK3Q9H999 370 aa27.34■■□□□ 1.97
SSH3-202ENST00000308298 CHGAP10645 457 aaKnown RBP27.33■■□□□ 1.97
SSH3-202ENST00000308298 CDCA8Q53HL2 280 aa27.33■■□□□ 1.97
SSH3-202ENST00000308298 SETBP1Q9Y6X0 1596 aa27.33■■□□□ 1.97
SSH3-202ENST00000308298 MYO3AQ8NEV4 1616 aa27.31■■□□□ 1.96
SSH3-202ENST00000308298 KDM5AP29375 1690 aaKnown RBP27.31■■□□□ 1.96
SSH3-202ENST00000308298 MYOM1P52179 1685 aa27.3■■□□□ 1.96
SSH3-202ENST00000308298 PIK3C2GO75747 1445 aa27.29■■□□□ 1.96
SSH3-202ENST00000308298 LRPPRCP42704 1394 aaKnown RBP27.29■■□□□ 1.96
SSH3-202ENST00000308298 RPGRIP1LQ68CZ1 1315 aa27.29■■□□□ 1.96
SSH3-202ENST00000308298 NLRP13Q86W25 1043 aa27.29■■□□□ 1.96
SSH3-202ENST00000308298 SLC24A1O60721 1099 aa27.26■■□□□ 1.95
SSH3-202ENST00000308298 BCANQ96GW7 911 aa27.26■■□□□ 1.95
SSH3-202ENST00000308298 REREQ9P2R6 1566 aa27.25■■□□□ 1.95
SSH3-202ENST00000308298 PREX1Q8TCU6 1659 aa27.25■■□□□ 1.95
SSH3-202ENST00000308298 CC2D1BQ5T0F9 858 aaKnown RBP27.23■■□□□ 1.95
SSH3-202ENST00000308298 NEXMIFQ5QGS0 1516 aa27.22■■□□□ 1.95
SSH3-202ENST00000308298 ERVK-7P63135 1459 aa27.21■■□□□ 1.95
SSH3-202ENST00000308298 ADGRB1O14514 1584 aa27.2■■□□□ 1.95
SSH3-202ENST00000308298 SBNO2Q9Y2G9 1366 aa27.2■■□□□ 1.94
SSH3-202ENST00000308298 KIF13AQ9H1H9 1805 aa27.2■■□□□ 1.94
SSH3-202ENST00000308298 C14orf93Q9H972 538 aaKnown RBP27.19■■□□□ 1.94
SSH3-202ENST00000308298 AGLP35573 1532 aa27.18■■□□□ 1.94
SSH3-202ENST00000308298 SMG6Q86US8 1419 aaKnown RBP27.17■■□□□ 1.94
SSH3-202ENST00000308298 MYO5BQ9ULV0 1848 aa27.16■■□□□ 1.94
SSH3-202ENST00000308298 KNSTRNQ9Y448 316 aa27.16■■□□□ 1.94
SSH3-202ENST00000308298 SLC52A1Q9NWF4 448 aa27.16■■□□□ 1.94
SSH3-202ENST00000308298 QRICH2Q9H0J4 1663 aa27.16■■□□□ 1.94
SSH3-202ENST00000308298 ASXL1Q8IXJ9 1541 aa27.15■■□□□ 1.94
SSH3-202ENST00000308298 CENPJQ9HC77 1338 aaPredicted RBP27.13■■□□□ 1.93
SSH3-202ENST00000308298 IDI1Q13907 227 aa27.13■■□□□ 1.93
SSH3-202ENST00000308298 TMEM131LA2VDJ0 1609 aa27.13■■□□□ 1.93
SSH3-202ENST00000308298 VGFO15240 615 aaPredicted RBP27.12■■□□□ 1.93
SSH3-202ENST00000308298 AMER1Q5JTC6 1135 aaPredicted RBP27.11■■□□□ 1.93
SSH3-202ENST00000308298 ZFYVE9O95405 1425 aa27.1■■□□□ 1.93
SSH3-202ENST00000308298 NPC1L1Q9UHC9 1359 aa27.1■■□□□ 1.93
SSH3-202ENST00000308298 NUDCQ9Y266 331 aa27.09■■□□□ 1.93
SSH3-202ENST00000308298 INSRP06213 1382 aa27.08■■□□□ 1.93
SSH3-202ENST00000308298 TRAK1Q9UPV9 953 aa27.08■■□□□ 1.93
SSH3-202ENST00000308298 CLTCQ00610 1675 aaKnown RBP27.07■■□□□ 1.92
SSH3-202ENST00000308298 ARHGEF28Q8N1W1 1705 aaKnown RBP27.07■■□□□ 1.92
SSH3-202ENST00000308298 ARHGEF40Q8TER5 1519 aa27.07■■□□□ 1.92
SSH3-202ENST00000308298 PPP6R1Q9UPN7 881 aa27.07■■□□□ 1.92
SSH3-202ENST00000308298 ERICH6BQ5W0A0 696 aa27.06■■□□□ 1.92
SSH3-202ENST00000308298 IRX6P78412 446 aaPredicted RBP27.05■■□□□ 1.92
SSH3-202ENST00000308298 TMEM132EQ6IEE7 984 aa27.05■■□□□ 1.92
SSH3-202ENST00000308298 NUTM2DQ5VT03 806 aaPredicted RBP27.04■■□□□ 1.92
SSH3-202ENST00000308298 BLMP54132 1417 aaPredicted RBP27.02■■□□□ 1.92
SSH3-202ENST00000308298 PPP2R1AP30153 589 aa27.02■■□□□ 1.92
SSH3-202ENST00000308298 SENP3-EIF4A1A0A087X0R7 540 aa27■■□□□ 1.91
SSH3-202ENST00000308298 FBXO31Q5XUX0 539 aaPredicted RBP27■■□□□ 1.91
SSH3-202ENST00000308298 SPATA31D1Q6ZQQ2 1576 aa26.97■■□□□ 1.91
SSH3-202ENST00000308298 CARD14Q9BXL6 1004 aa26.94■■□□□ 1.9
SSH3-202ENST00000308298 RNF123Q5XPI4 1314 aa26.92■■□□□ 1.9
SSH3-202ENST00000308298 TULP4Q9NRJ4 1543 aa26.92■■□□□ 1.9
SSH3-202ENST00000308298 PDE3BQ13370 1112 aa26.91■■□□□ 1.9
SSH3-202ENST00000308298 PUS7Q96PZ0 661 aaKnown RBP26.9■■□□□ 1.9
SSH3-202ENST00000308298 PPP4R2Q9NY27 417 aa26.9■■□□□ 1.9
SSH3-202ENST00000308298 TSHZ2Q9NRE2 1034 aa26.89■■□□□ 1.89
SSH3-202ENST00000308298 USP32Q8NFA0 1604 aa26.88■■□□□ 1.89
SSH3-202ENST00000308298 EVC2Q86UK5 1308 aa26.88■■□□□ 1.89
SSH3-202ENST00000308298 MLECQ14165 292 aa26.87■■□□□ 1.89
SSH3-202ENST00000308298 STAG3Q9UJ98 1225 aa26.87■■□□□ 1.89
SSH3-202ENST00000308298 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
SSH3-202ENST00000308298 WDR43Q15061 677 aaKnown RBP eCLIP26.87■■□□□ 1.89
SSH3-202ENST00000308298 NSD3Q9BZ95 1437 aa26.87■■□□□ 1.89
SSH3-202ENST00000308298 ADAMTS8Q9UP79 889 aa26.87■■□□□ 1.89
SSH3-202ENST00000308298 SALL2Q9Y467 1007 aaPredicted RBP26.86■■□□□ 1.89
SSH3-202ENST00000308298 A2ML1A8K2U0 1454 aa26.86■■□□□ 1.89
SSH3-202ENST00000308298 PTPRMP28827 1452 aa26.85■■□□□ 1.89
SSH3-202ENST00000308298 SLC12A5Q9H2X9 1139 aa26.84■■□□□ 1.89
SSH3-202ENST00000308298 YTHDC2Q9H6S0 1430 aaKnown RBP26.83■■□□□ 1.89
SSH3-202ENST00000308298 STK26Q9P289 416 aa26.81■■□□□ 1.88
SSH3-202ENST00000308298 SENP3Q9H4L4 574 aaPredicted RBP26.79■■□□□ 1.88
SSH3-202ENST00000308298 RIMS2Q9UQ26 1411 aa26.78■■□□□ 1.88
SSH3-202ENST00000308298 ESF1Q9H501 851 aaKnown RBP26.78■■□□□ 1.88
SSH3-202ENST00000308298 SETD1AO15047 1707 aaKnown RBP26.78■■□□□ 1.88
SSH3-202ENST00000308298 ANKRD36BQ8N2N9 1353 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms