RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 RICTORQ6R327 1708 aa22.49■■□□□ 1.19
TVP23B-201ENST00000307767 PANK3Q9H999 370 aa22.48■■□□□ 1.19
TVP23B-201ENST00000307767 CFAP70Q5T0N1 1121 aa22.48■■□□□ 1.19
TVP23B-201ENST00000307767 RIMBP3CA6NJZ7 1639 aa22.47■■□□□ 1.19
TVP23B-201ENST00000307767 RIMBP3BA6NNM3 1639 aa22.47■■□□□ 1.19
TVP23B-201ENST00000307767 RIMBP3Q9UFD9 1639 aa22.47■■□□□ 1.19
TVP23B-201ENST00000307767 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
TVP23B-201ENST00000307767 KIF1BO60333 1816 aa22.46■■□□□ 1.19
TVP23B-201ENST00000307767 NEFLP07196 543 aa22.46■■□□□ 1.19
TVP23B-201ENST00000307767 YEATS2Q9ULM3 1422 aa22.46■■□□□ 1.19
TVP23B-201ENST00000307767 WASHC2CQ9Y4E1 1318 aa22.46■■□□□ 1.19
TVP23B-201ENST00000307767 NOS1P29475 1434 aa22.44■■□□□ 1.18
TVP23B-201ENST00000307767 SIGLEC1Q9BZZ2 1709 aa22.42■■□□□ 1.18
TVP23B-201ENST00000307767 NLRP13Q86W25 1043 aa22.4■■□□□ 1.18
TVP23B-201ENST00000307767 CAMSAP1Q5T5Y3 1602 aa22.4■■□□□ 1.18
TVP23B-201ENST00000307767 SMG6Q86US8 1419 aaKnown RBP22.38■■□□□ 1.17
TVP23B-201ENST00000307767 CC2D1BQ5T0F9 858 aaKnown RBP22.37■■□□□ 1.17
TVP23B-201ENST00000307767 SYNMO15061 1565 aa22.37■■□□□ 1.17
TVP23B-201ENST00000307767 DIP2BQ9P265 1576 aa22.37■■□□□ 1.17
TVP23B-201ENST00000307767 ARHGAP31Q2M1Z3 1444 aa22.37■■□□□ 1.17
TVP23B-201ENST00000307767 IRX6P78412 446 aaPredicted RBP22.36■■□□□ 1.17
TVP23B-201ENST00000307767 PIK3C2GO75747 1445 aa22.36■■□□□ 1.17
TVP23B-201ENST00000307767 PIK3C2BO00750 1634 aa22.36■■□□□ 1.17
TVP23B-201ENST00000307767 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
TVP23B-201ENST00000307767 FAM69CQ0P6D2 419 aa22.35■■□□□ 1.17
TVP23B-201ENST00000307767 MYOM1P52179 1685 aa22.35■■□□□ 1.17
TVP23B-201ENST00000307767 PPLO60437 1756 aa22.35■■□□□ 1.17
TVP23B-201ENST00000307767 EIF3AQ14152 1382 aaKnown RBP22.35■■□□□ 1.17
TVP23B-201ENST00000307767 ERVK-7P63135 1459 aa22.35■■□□□ 1.17
TVP23B-201ENST00000307767 SENP3-EIF4A1A0A087X0R7 540 aa22.34■■□□□ 1.17
TVP23B-201ENST00000307767 AMER1Q5JTC6 1135 aaPredicted RBP22.34■■□□□ 1.17
TVP23B-201ENST00000307767 ZMYM4Q5VZL5 1548 aa22.33■■□□□ 1.17
TVP23B-201ENST00000307767 CHGAP10645 457 aaKnown RBP22.33■■□□□ 1.17
TVP23B-201ENST00000307767 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.17
TVP23B-201ENST00000307767 SETBP1Q9Y6X0 1596 aa22.33■■□□□ 1.17
TVP23B-201ENST00000307767 ADGRB1O14514 1584 aa22.32■■□□□ 1.16
TVP23B-201ENST00000307767 TSHZ2Q9NRE2 1034 aa22.32■■□□□ 1.16
TVP23B-201ENST00000307767 CDCA8Q53HL2 280 aa22.31■■□□□ 1.16
TVP23B-201ENST00000307767 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
TVP23B-201ENST00000307767 MYO3AQ8NEV4 1616 aa22.31■■□□□ 1.16
TVP23B-201ENST00000307767 NUDCQ9Y266 331 aa22.3■■□□□ 1.16
TVP23B-201ENST00000307767 SBNO2Q9Y2G9 1366 aa22.29■■□□□ 1.16
TVP23B-201ENST00000307767 ZC3H13Q5T200 1668 aaKnown RBP22.28■■□□□ 1.16
TVP23B-201ENST00000307767 RNF123Q5XPI4 1314 aa22.27■■□□□ 1.16
TVP23B-201ENST00000307767 IDI1Q13907 227 aa22.27■■□□□ 1.16
TVP23B-201ENST00000307767 NEXMIFQ5QGS0 1516 aa22.26■■□□□ 1.15
TVP23B-201ENST00000307767 ERICH6BQ5W0A0 696 aa22.26■■□□□ 1.15
TVP23B-201ENST00000307767 INSRP06213 1382 aa22.25■■□□□ 1.15
TVP23B-201ENST00000307767 KNSTRNQ9Y448 316 aa22.25■■□□□ 1.15
TVP23B-201ENST00000307767 KDM5AP29375 1690 aaKnown RBP22.24■■□□□ 1.15
TVP23B-201ENST00000307767 NPC1L1Q9UHC9 1359 aa22.24■■□□□ 1.15
TVP23B-201ENST00000307767 ASXL1Q8IXJ9 1541 aa22.24■■□□□ 1.15
TVP23B-201ENST00000307767 PPP2R1AP30153 589 aa22.23■■□□□ 1.15
TVP23B-201ENST00000307767 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
TVP23B-201ENST00000307767 BLMP54132 1417 aaPredicted RBP22.22■■□□□ 1.15
TVP23B-201ENST00000307767 CARD14Q9BXL6 1004 aa22.22■■□□□ 1.15
TVP23B-201ENST00000307767 CENPJQ9HC77 1338 aaPredicted RBP22.21■■□□□ 1.15
TVP23B-201ENST00000307767 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
TVP23B-201ENST00000307767 TRAK1Q9UPV9 953 aa22.21■■□□□ 1.15
TVP23B-201ENST00000307767 NUTM2DQ5VT03 806 aaPredicted RBP22.2■■□□□ 1.14
TVP23B-201ENST00000307767 SLC52A1Q9NWF4 448 aa22.19■■□□□ 1.14
TVP23B-201ENST00000307767 REREQ9P2R6 1566 aa22.18■■□□□ 1.14
TVP23B-201ENST00000307767 ZFYVE9O95405 1425 aa22.18■■□□□ 1.14
TVP23B-201ENST00000307767 PREX1Q8TCU6 1659 aa22.18■■□□□ 1.14
TVP23B-201ENST00000307767 FBXO31Q5XUX0 539 aaPredicted RBP22.18■■□□□ 1.14
TVP23B-201ENST00000307767 TSPOAP1O95153 1857 aa22.17■■□□□ 1.14
TVP23B-201ENST00000307767 AGLP35573 1532 aa22.17■■□□□ 1.14
TVP23B-201ENST00000307767 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
TVP23B-201ENST00000307767 PPP4R2Q9NY27 417 aa22.16■■□□□ 1.14
TVP23B-201ENST00000307767 TMEM131LA2VDJ0 1609 aa22.16■■□□□ 1.14
TVP23B-201ENST00000307767 ADAMTS8Q9UP79 889 aa22.14■■□□□ 1.13
TVP23B-201ENST00000307767 QRICH2Q9H0J4 1663 aa22.13■■□□□ 1.13
TVP23B-201ENST00000307767 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
TVP23B-201ENST00000307767 MYO5BQ9ULV0 1848 aa22.1■■□□□ 1.13
TVP23B-201ENST00000307767 CDCA7LQ96GN5 454 aa22.1■■□□□ 1.13
TVP23B-201ENST00000307767 PDE3BQ13370 1112 aa22.09■■□□□ 1.13
TVP23B-201ENST00000307767 ARHGEF28Q8N1W1 1705 aaKnown RBP22.09■■□□□ 1.13
TVP23B-201ENST00000307767 TULP4Q9NRJ4 1543 aa22.08■■□□□ 1.13
TVP23B-201ENST00000307767 SLC12A5Q9H2X9 1139 aa22.08■■□□□ 1.12
TVP23B-201ENST00000307767 PPP6R1Q9UPN7 881 aa22.08■■□□□ 1.12
TVP23B-201ENST00000307767 KIF13AQ9H1H9 1805 aa22.06■■□□□ 1.12
TVP23B-201ENST00000307767 B4GALNT3Q6L9W6 998 aa22.05■■□□□ 1.12
TVP23B-201ENST00000307767 PUS7Q96PZ0 661 aaKnown RBP22.04■■□□□ 1.12
TVP23B-201ENST00000307767 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
TVP23B-201ENST00000307767 PLEKHH1Q9ULM0 1364 aa22.02■■□□□ 1.12
TVP23B-201ENST00000307767 SPATA31D1Q6ZQQ2 1576 aa22.02■■□□□ 1.11
TVP23B-201ENST00000307767 CLTCQ00610 1675 aaKnown RBP22.02■■□□□ 1.11
TVP23B-201ENST00000307767 ZNF521Q96K83 1311 aa22.01■■□□□ 1.11
TVP23B-201ENST00000307767 PTPRMP28827 1452 aa22.01■■□□□ 1.11
TVP23B-201ENST00000307767 ARHGEF40Q8TER5 1519 aa22■■□□□ 1.11
TVP23B-201ENST00000307767 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
TVP23B-201ENST00000307767 RCAN3Q9UKA8 241 aa21.99■■□□□ 1.11
TVP23B-201ENST00000307767 A2ML1A8K2U0 1454 aa21.98■■□□□ 1.11
TVP23B-201ENST00000307767 RRP1P56182 461 aaKnown RBP21.98■■□□□ 1.11
TVP23B-201ENST00000307767 WDR43Q15061 677 aaKnown RBP eCLIP21.98■■□□□ 1.11
TVP23B-201ENST00000307767 EVC2Q86UK5 1308 aa21.98■■□□□ 1.11
TVP23B-201ENST00000307767 STK26Q9P289 416 aa21.97■■□□□ 1.11
TVP23B-201ENST00000307767 ALKQ9UM73 1620 aa21.97■■□□□ 1.11
TVP23B-201ENST00000307767 YTHDC2Q9H6S0 1430 aaKnown RBP21.96■■□□□ 1.11
TVP23B-201ENST00000307767 MLECQ14165 292 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms