RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 TMEM132EQ6IEE7 984 aa23.2■■□□□ 1.3
RETREG1-201ENST00000306320 FAM161AQ3B820 660 aa23.19■■□□□ 1.3
RETREG1-201ENST00000306320 ERBINQ96RT1 1412 aa23.19■■□□□ 1.3
RETREG1-201ENST00000306320 TRAK1Q9UPV9 953 aa23.18■■□□□ 1.3
RETREG1-201ENST00000306320 ARHGEF5Q12774 1597 aa23.18■■□□□ 1.3
RETREG1-201ENST00000306320 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
RETREG1-201ENST00000306320 ADGRF5Q8IZF2 1346 aa23.17■■□□□ 1.3
RETREG1-201ENST00000306320 NPM1P06748 294 aaKnown RBP eCLIP23.17■■□□□ 1.3
RETREG1-201ENST00000306320 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
RETREG1-201ENST00000306320 RRAGDQ9NQL2 400 aaPredicted RBP23.16■■□□□ 1.3
RETREG1-201ENST00000306320 WDR43Q15061 677 aaKnown RBP eCLIP23.15■■□□□ 1.3
RETREG1-201ENST00000306320 CANXP27824 592 aaKnown RBP23.15■■□□□ 1.3
RETREG1-201ENST00000306320 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
RETREG1-201ENST00000306320 RAPGEF3O95398 923 aa23.14■■□□□ 1.3
RETREG1-201ENST00000306320 FAM43AQ8N2R8 423 aa23.13■■□□□ 1.29
RETREG1-201ENST00000306320 GLIPR1L2Q4G1C9 344 aa23.11■■□□□ 1.29
RETREG1-201ENST00000306320 UGGT1Q9NYU2 1555 aa23.09■■□□□ 1.29
RETREG1-201ENST00000306320 PPP2R1AP30153 589 aa23.09■■□□□ 1.29
RETREG1-201ENST00000306320 C8orf34Q49A92 452 aa23.09■■□□□ 1.29
RETREG1-201ENST00000306320 CFAP65Q6ZU64 1925 aaKnown RBP23.09■■□□□ 1.29
RETREG1-201ENST00000306320 ZCCHC11Q5TAX3 1644 aaKnown RBP23.08■■□□□ 1.29
RETREG1-201ENST00000306320 PNNQ9H307 717 aaKnown RBP23.07■■□□□ 1.28
RETREG1-201ENST00000306320 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
RETREG1-201ENST00000306320 PARD3Q8TEW0 1356 aa23.07■■□□□ 1.28
RETREG1-201ENST00000306320 STK26Q9P289 416 aa23.07■■□□□ 1.28
RETREG1-201ENST00000306320 FANCAO15360 1455 aa23.06■■□□□ 1.28
RETREG1-201ENST00000306320 CENPQQ7L2Z9 268 aaPredicted RBP23.06■■□□□ 1.28
RETREG1-201ENST00000306320 DUOX2Q9NRD8 1548 aa23.06■■□□□ 1.28
RETREG1-201ENST00000306320 LRPPRCP42704 1394 aaKnown RBP23.05■■□□□ 1.28
RETREG1-201ENST00000306320 RRP7AQ9Y3A4 280 aaKnown RBP23.05■■□□□ 1.28
RETREG1-201ENST00000306320 KANK1Q14678 1352 aa23.05■■□□□ 1.28
RETREG1-201ENST00000306320 PANK2Q9BZ23 570 aa23.04■■□□□ 1.28
RETREG1-201ENST00000306320 PDE3BQ13370 1112 aa23.04■■□□□ 1.28
RETREG1-201ENST00000306320 SEC24BO95487 1268 aa23.04■■□□□ 1.28
RETREG1-201ENST00000306320 APAF1O14727 1248 aa23.02■■□□□ 1.28
RETREG1-201ENST00000306320 HSP90AA2PQ14568 343 aaPredicted RBP23.02■■□□□ 1.28
RETREG1-201ENST00000306320 ARID3AQ99856 593 aa23.02■■□□□ 1.28
RETREG1-201ENST00000306320 ZMYND15Q9H091 742 aa23.02■■□□□ 1.28
RETREG1-201ENST00000306320 SLC12A5Q9H2X9 1139 aa23.01■■□□□ 1.27
RETREG1-201ENST00000306320 TRPM1Q7Z4N2 1603 aa23.01■■□□□ 1.27
RETREG1-201ENST00000306320 ADGRL1O94910 1474 aa23.01■■□□□ 1.27
RETREG1-201ENST00000306320 MAGI2Q86UL8 1455 aa23■■□□□ 1.27
RETREG1-201ENST00000306320 COL17A1Q9UMD9 1497 aaPredicted RBP23■■□□□ 1.27
RETREG1-201ENST00000306320 POLR1AO95602 1720 aaPredicted RBP23■■□□□ 1.27
RETREG1-201ENST00000306320 BCAR3O75815 825 aa23■■□□□ 1.27
RETREG1-201ENST00000306320 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
RETREG1-201ENST00000306320 HSP90AA1P07900 732 aaKnown RBP22.99■■□□□ 1.27
RETREG1-201ENST00000306320 BECN1Q14457 450 aa22.99■■□□□ 1.27
RETREG1-201ENST00000306320 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.99■■□□□ 1.27
RETREG1-201ENST00000306320 ASXL2Q76L83 1435 aa22.98■■□□□ 1.27
RETREG1-201ENST00000306320 ATP10AO60312 1499 aa22.97■■□□□ 1.27
RETREG1-201ENST00000306320 GPRASP1Q5JY77 1395 aa22.97■■□□□ 1.27
RETREG1-201ENST00000306320 CARD14Q9BXL6 1004 aa22.97■■□□□ 1.27
RETREG1-201ENST00000306320 SPINK5Q9NQ38 1064 aaPredicted RBP22.97■■□□□ 1.27
RETREG1-201ENST00000306320 ABCC1P33527 1531 aa22.96■■□□□ 1.27
RETREG1-201ENST00000306320 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
RETREG1-201ENST00000306320 OSCARQ8IYS5 282 aa22.96■■□□□ 1.27
RETREG1-201ENST00000306320 SHROOM2Q13796 1616 aa22.96■■□□□ 1.27
RETREG1-201ENST00000306320 GOLGA6L3A6NEY3 463 aa22.95■■□□□ 1.26
RETREG1-201ENST00000306320 MAST1Q9Y2H9 1570 aa22.95■■□□□ 1.26
RETREG1-201ENST00000306320 COG6Q9Y2V7 657 aa22.95■■□□□ 1.26
RETREG1-201ENST00000306320 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
RETREG1-201ENST00000306320 WDR7Q9Y4E6 1490 aa22.94■■□□□ 1.26
RETREG1-201ENST00000306320 MLECQ14165 292 aa22.93■■□□□ 1.26
RETREG1-201ENST00000306320 PLEKHH1Q9ULM0 1364 aa22.93■■□□□ 1.26
RETREG1-201ENST00000306320 L1TD1Q5T7N2 865 aaKnown RBP22.93■■□□□ 1.26
RETREG1-201ENST00000306320 UNC13BO14795 1591 aa22.93■■□□□ 1.26
RETREG1-201ENST00000306320 UPF2Q9HAU5 1272 aaKnown RBP22.93■■□□□ 1.26
RETREG1-201ENST00000306320 BCL2L13Q9BXK5 485 aa22.92■■□□□ 1.26
RETREG1-201ENST00000306320 IGHDP01880 384 aa22.91■■□□□ 1.26
RETREG1-201ENST00000306320 GOLGA2Q08379 1002 aa22.91■■□□□ 1.26
RETREG1-201ENST00000306320 PANK1Q8TE04 598 aa22.91■■□□□ 1.26
RETREG1-201ENST00000306320 CLUAP1Q96AJ1 413 aa22.91■■□□□ 1.26
RETREG1-201ENST00000306320 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
RETREG1-201ENST00000306320 CDCA8Q53HL2 280 aa22.9■■□□□ 1.26
RETREG1-201ENST00000306320 PLPPR3Q6T4P5 718 aa22.89■■□□□ 1.26
RETREG1-201ENST00000306320 KDM2BQ8NHM5 1336 aa22.89■■□□□ 1.25
RETREG1-201ENST00000306320 CABP2Q9NPB3 220 aa22.88■■□□□ 1.25
RETREG1-201ENST00000306320 NOS1P29475 1434 aa22.88■■□□□ 1.25
RETREG1-201ENST00000306320 XRCC6P12956 609 aaKnown RBP eCLIP22.88■■□□□ 1.25
RETREG1-201ENST00000306320 PRDM15P57071 1507 aaPredicted RBP22.88■■□□□ 1.25
RETREG1-201ENST00000306320 E9PCH4 1651 aa22.87■■□□□ 1.25
RETREG1-201ENST00000306320 MORC1Q86VD1 984 aa22.87■■□□□ 1.25
RETREG1-201ENST00000306320 ZFYVE16Q7Z3T8 1539 aa22.86■■□□□ 1.25
RETREG1-201ENST00000306320 CLASP1Q7Z460 1538 aa22.86■■□□□ 1.25
RETREG1-201ENST00000306320 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
RETREG1-201ENST00000306320 FOXD4L1Q9NU39 408 aa22.85■■□□□ 1.25
RETREG1-201ENST00000306320 ATP7AQ04656 1500 aa22.84■■□□□ 1.25
RETREG1-201ENST00000306320 TRIM44Q96DX7 344 aaPredicted RBP22.84■■□□□ 1.25
RETREG1-201ENST00000306320 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
RETREG1-201ENST00000306320 CLTCL1P53675 1640 aa22.84■■□□□ 1.25
RETREG1-201ENST00000306320 ZBTB7CA1YPR0 619 aa22.83■■□□□ 1.25
RETREG1-201ENST00000306320 DUSP27Q5VZP5 1158 aa22.83■■□□□ 1.25
RETREG1-201ENST00000306320 CENPJQ9HC77 1338 aaPredicted RBP22.83■■□□□ 1.25
RETREG1-201ENST00000306320 MFAP1P55081 439 aaKnown RBP22.83■■□□□ 1.25
RETREG1-201ENST00000306320 CD109Q6YHK3 1445 aa22.82■■□□□ 1.24
RETREG1-201ENST00000306320 FBLN1P23142 703 aa22.81■■□□□ 1.24
RETREG1-201ENST00000306320 FBXO31Q5XUX0 539 aaPredicted RBP22.81■■□□□ 1.24
RETREG1-201ENST00000306320 STAG3Q9UJ98 1225 aa22.79■■□□□ 1.24
RETREG1-201ENST00000306320 SRPK2P78362 688 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms