RNA–Protein interactions for RNA: ENST00000306006.10

ZNF239-201, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-201ENST00000306006 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
ZNF239-201ENST00000306006 AGLP35573 1532 aa13.07□□□□□ -0.32
ZNF239-201ENST00000306006 PIK3C2BO00750 1634 aa13.07□□□□□ -0.32
ZNF239-201ENST00000306006 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
ZNF239-201ENST00000306006 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
ZNF239-201ENST00000306006 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
ZNF239-201ENST00000306006 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
ZNF239-201ENST00000306006 SCAF11Q99590 1463 aaKnown RBP13.06□□□□□ -0.32
ZNF239-201ENST00000306006 PPLO60437 1756 aa13.05□□□□□ -0.32
ZNF239-201ENST00000306006 ARHGEF40Q8TER5 1519 aa13.04□□□□□ -0.32
ZNF239-201ENST00000306006 TMF1P82094 1093 aa13.04□□□□□ -0.32
ZNF239-201ENST00000306006 IDI1Q13907 227 aa13.04□□□□□ -0.32
ZNF239-201ENST00000306006 PREX1Q8TCU6 1659 aa13.04□□□□□ -0.32
ZNF239-201ENST00000306006 RPGRIP1LQ68CZ1 1315 aa13.04□□□□□ -0.32
ZNF239-201ENST00000306006 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
ZNF239-201ENST00000306006 FBXO31Q5XUX0 539 aaPredicted RBP13.02□□□□□ -0.32
ZNF239-201ENST00000306006 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.32
ZNF239-201ENST00000306006 SLC52A1Q9NWF4 448 aa13.02□□□□□ -0.33
ZNF239-201ENST00000306006 PIK3C2GO75747 1445 aa13.02□□□□□ -0.33
ZNF239-201ENST00000306006 MLECQ14165 292 aa13.01□□□□□ -0.33
ZNF239-201ENST00000306006 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
ZNF239-201ENST00000306006 CLTCQ00610 1675 aaKnown RBP13□□□□□ -0.33
ZNF239-201ENST00000306006 EIF3AQ14152 1382 aaKnown RBP13□□□□□ -0.33
ZNF239-201ENST00000306006 NEXMIFQ5QGS0 1516 aa13□□□□□ -0.33
ZNF239-201ENST00000306006 ERVK-7P63135 1459 aa13□□□□□ -0.33
ZNF239-201ENST00000306006 C14orf93Q9H972 538 aaKnown RBP13□□□□□ -0.33
ZNF239-201ENST00000306006 NUTM2DQ5VT03 806 aaPredicted RBP12.99□□□□□ -0.33
ZNF239-201ENST00000306006 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
ZNF239-201ENST00000306006 TMEM131LA2VDJ0 1609 aa12.98□□□□□ -0.33
ZNF239-201ENST00000306006 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
ZNF239-201ENST00000306006 MYO5BQ9ULV0 1848 aa12.98□□□□□ -0.33
ZNF239-201ENST00000306006 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
ZNF239-201ENST00000306006 PANK3Q9H999 370 aa12.97□□□□□ -0.33
ZNF239-201ENST00000306006 ADGRB1O14514 1584 aa12.97□□□□□ -0.33
ZNF239-201ENST00000306006 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
ZNF239-201ENST00000306006 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
ZNF239-201ENST00000306006 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
ZNF239-201ENST00000306006 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
ZNF239-201ENST00000306006 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
ZNF239-201ENST00000306006 MYO3AQ8NEV4 1616 aa12.94□□□□□ -0.34
ZNF239-201ENST00000306006 RALBP1Q15311 655 aa12.94□□□□□ -0.34
ZNF239-201ENST00000306006 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
ZNF239-201ENST00000306006 SPATA31D1Q6ZQQ2 1576 aa12.94□□□□□ -0.34
ZNF239-201ENST00000306006 TRAK1Q9UPV9 953 aa12.94□□□□□ -0.34
ZNF239-201ENST00000306006 MYBBP1AQ9BQG0 1328 aaKnown RBP12.92□□□□□ -0.34
ZNF239-201ENST00000306006 PARD3Q8TEW0 1356 aa12.92□□□□□ -0.34
ZNF239-201ENST00000306006 CENPJQ9HC77 1338 aaPredicted RBP12.92□□□□□ -0.34
ZNF239-201ENST00000306006 ZMYM3Q14202 1370 aa12.92□□□□□ -0.34
ZNF239-201ENST00000306006 SBNO2Q9Y2G9 1366 aa12.92□□□□□ -0.34
ZNF239-201ENST00000306006 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
ZNF239-201ENST00000306006 ESF1Q9H501 851 aaKnown RBP12.92□□□□□ -0.34
ZNF239-201ENST00000306006 KDM5AP29375 1690 aaKnown RBP12.91□□□□□ -0.34
ZNF239-201ENST00000306006 MYOM1P52179 1685 aa12.91□□□□□ -0.34
ZNF239-201ENST00000306006 SENP3Q9H4L4 574 aaPredicted RBP12.91□□□□□ -0.34
ZNF239-201ENST00000306006 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
ZNF239-201ENST00000306006 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
ZNF239-201ENST00000306006 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.34
ZNF239-201ENST00000306006 TMC1Q8TDI8 760 aa12.9□□□□□ -0.34
ZNF239-201ENST00000306006 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
ZNF239-201ENST00000306006 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
ZNF239-201ENST00000306006 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
ZNF239-201ENST00000306006 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
ZNF239-201ENST00000306006 ASXL1Q8IXJ9 1541 aa12.88□□□□□ -0.35
ZNF239-201ENST00000306006 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
ZNF239-201ENST00000306006 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
ZNF239-201ENST00000306006 KNSTRNQ9Y448 316 aa12.87□□□□□ -0.35
ZNF239-201ENST00000306006 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
ZNF239-201ENST00000306006 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
ZNF239-201ENST00000306006 STK26Q9P289 416 aa12.85□□□□□ -0.35
ZNF239-201ENST00000306006 ALKQ9UM73 1620 aa12.84□□□□□ -0.35
ZNF239-201ENST00000306006 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
ZNF239-201ENST00000306006 LRPPRCP42704 1394 aaKnown RBP12.84□□□□□ -0.35
ZNF239-201ENST00000306006 TNRQ92752 1358 aa12.84□□□□□ -0.35
ZNF239-201ENST00000306006 CARD14Q9BXL6 1004 aa12.83□□□□□ -0.36
ZNF239-201ENST00000306006 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
ZNF239-201ENST00000306006 SAFB2Q14151 953 aaKnown RBP eCLIP12.81□□□□□ -0.36
ZNF239-201ENST00000306006 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
ZNF239-201ENST00000306006 TULP4Q9NRJ4 1543 aa12.81□□□□□ -0.36
ZNF239-201ENST00000306006 PTPRMP28827 1452 aa12.81□□□□□ -0.36
ZNF239-201ENST00000306006 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
ZNF239-201ENST00000306006 EVC2Q86UK5 1308 aa12.81□□□□□ -0.36
ZNF239-201ENST00000306006 CEBPAP49715 358 aaPredicted RBP12.8□□□□□ -0.36
ZNF239-201ENST00000306006 SLC12A5Q9H2X9 1139 aa12.8□□□□□ -0.36
ZNF239-201ENST00000306006 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
ZNF239-201ENST00000306006 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
ZNF239-201ENST00000306006 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
ZNF239-201ENST00000306006 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
ZNF239-201ENST00000306006 PRAM1Q96QH2 718 aa12.79□□□□□ -0.36
ZNF239-201ENST00000306006 UBR1Q8IWV7 1749 aa12.78□□□□□ -0.36
ZNF239-201ENST00000306006 NRXN3Q9Y4C0 1643 aa12.78□□□□□ -0.36
ZNF239-201ENST00000306006 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
ZNF239-201ENST00000306006 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
ZNF239-201ENST00000306006 POGKQ9P215 609 aa12.77□□□□□ -0.36
ZNF239-201ENST00000306006 MINK1Q8N4C8 1332 aaPredicted RBP12.76□□□□□ -0.37
ZNF239-201ENST00000306006 C3P01024 1663 aa12.76□□□□□ -0.37
ZNF239-201ENST00000306006 TMEM2Q9UHN6 1383 aa12.76□□□□□ -0.37
ZNF239-201ENST00000306006 FER1L4A9Z1Z3 1794 aa12.76□□□□□ -0.37
ZNF239-201ENST00000306006 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
ZNF239-201ENST00000306006 FKBP8Q14318 412 aa12.76□□□□□ -0.37
ZNF239-201ENST00000306006 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms