RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 SYNE3Q6ZMZ3 975 aa24.29■■□□□ 1.48
CTNND2-201ENST00000304623 EVC2Q86UK5 1308 aa24.29■■□□□ 1.48
CTNND2-201ENST00000304623 NUCB2P80303 420 aa24.29■■□□□ 1.48
CTNND2-201ENST00000304623 NUTM2DQ5VT03 806 aaPredicted RBP24.29■■□□□ 1.48
CTNND2-201ENST00000304623 MCTP1Q6DN14 999 aa24.29■■□□□ 1.48
CTNND2-201ENST00000304623 COG3Q96JB2 828 aa24.29■■□□□ 1.48
CTNND2-201ENST00000304623 ZNF592Q92610 1267 aa24.28■■□□□ 1.48
CTNND2-201ENST00000304623 TRHP20396 242 aaPredicted RBP24.27■■□□□ 1.48
CTNND2-201ENST00000304623 AAMPQ13685 434 aa24.27■■□□□ 1.48
CTNND2-201ENST00000304623 ROCK1Q13464 1354 aa24.27■■□□□ 1.48
CTNND2-201ENST00000304623 TEX35Q5T0J7 233 aa24.25■■□□□ 1.47
CTNND2-201ENST00000304623 IPO7O95373 1038 aaKnown RBP24.25■■□□□ 1.47
CTNND2-201ENST00000304623 FAM43AQ8N2R8 423 aa24.25■■□□□ 1.47
CTNND2-201ENST00000304623 TRIM29Q14134 588 aa24.24■■□□□ 1.47
CTNND2-201ENST00000304623 G3V3G9 751 aa24.24■■□□□ 1.47
CTNND2-201ENST00000304623 DCAF8Q5TAQ9 597 aa24.24■■□□□ 1.47
CTNND2-201ENST00000304623 ANKRD20A12PQ8NF67 263 aa24.23■■□□□ 1.47
CTNND2-201ENST00000304623 ANO2Q9NQ90 1003 aa24.23■■□□□ 1.47
CTNND2-201ENST00000304623 FAM13BQ9NYF5 915 aa24.23■■□□□ 1.47
CTNND2-201ENST00000304623 RNF20Q5VTR2 975 aa24.22■■□□□ 1.47
CTNND2-201ENST00000304623 NEXNQ0ZGT2 675 aa24.22■■□□□ 1.47
CTNND2-201ENST00000304623 INTS3Q68E01 1043 aaKnown RBP24.22■■□□□ 1.47
CTNND2-201ENST00000304623 VGFO15240 615 aaPredicted RBP24.22■■□□□ 1.47
CTNND2-201ENST00000304623 GTF2E1P29083 439 aaPredicted RBP24.22■■□□□ 1.47
CTNND2-201ENST00000304623 C1orf141Q5JVX7 400 aa24.22■■□□□ 1.47
CTNND2-201ENST00000304623 VPS53Q5VIR6 699 aa24.21■■□□□ 1.47
CTNND2-201ENST00000304623 BICD2Q8TD16 824 aa24.21■■□□□ 1.47
CTNND2-201ENST00000304623 HOOK1Q9UJC3 728 aaKnown RBP24.21■■□□□ 1.47
CTNND2-201ENST00000304623 TEFQ10587 303 aa24.2■■□□□ 1.46
CTNND2-201ENST00000304623 CCDC47Q96A33 483 aaKnown RBP24.2■■□□□ 1.46
CTNND2-201ENST00000304623 HOMER1Q86YM7 354 aa24.2■■□□□ 1.46
CTNND2-201ENST00000304623 DIAPH1O60610 1272 aaKnown RBP24.19■■□□□ 1.46
CTNND2-201ENST00000304623 IFIT2P09913 472 aaKnown RBP24.19■■□□□ 1.46
CTNND2-201ENST00000304623 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
CTNND2-201ENST00000304623 C9orf78Q9NZ63 289 aaPredicted RBP24.19■■□□□ 1.46
CTNND2-201ENST00000304623 CPLX1O14810 134 aa24.18■■□□□ 1.46
CTNND2-201ENST00000304623 C22orf23Q9BZE7 217 aa24.18■■□□□ 1.46
CTNND2-201ENST00000304623 PRM3Q9NNZ6 103 aa24.18■■□□□ 1.46
CTNND2-201ENST00000304623 CCDC9Q9Y3X0 531 aaKnown RBP24.18■■□□□ 1.46
CTNND2-201ENST00000304623 SMC3Q9UQE7 1217 aa24.17■■□□□ 1.46
CTNND2-201ENST00000304623 RUNDC1Q96C34 613 aa24.17■■□□□ 1.46
CTNND2-201ENST00000304623 SASS6Q6UVJ0 657 aa24.17■■□□□ 1.46
CTNND2-201ENST00000304623 MRE11P49959 708 aa24.16■■□□□ 1.46
CTNND2-201ENST00000304623 RIPK4P57078 832 aa24.16■■□□□ 1.46
CTNND2-201ENST00000304623 NFKBIBQ15653 356 aa24.16■■□□□ 1.46
CTNND2-201ENST00000304623 NUTM2FA1L443 756 aa24.15■■□□□ 1.46
CTNND2-201ENST00000304623 PCMTD1Q96MG8 357 aaPredicted RBP24.14■■□□□ 1.45
CTNND2-201ENST00000304623 ARGLU1Q9NWB6 273 aaPredicted RBP24.14■■□□□ 1.45
CTNND2-201ENST00000304623 VPS37CA5D8V6 355 aaPredicted RBP24.13■■□□□ 1.45
CTNND2-201ENST00000304623 HSP90AB4PQ58FF6 505 aa24.13■■□□□ 1.45
CTNND2-201ENST00000304623 CCDC7Q96M83 1385 aa24.12■■□□□ 1.45
CTNND2-201ENST00000304623 TRDNQ13061 729 aa24.11■■□□□ 1.45
CTNND2-201ENST00000304623 CCDC73Q6ZRK6 1079 aa24.11■■□□□ 1.45
CTNND2-201ENST00000304623 CCDC39Q9UFE4 941 aa24.11■■□□□ 1.45
CTNND2-201ENST00000304623 DDX58O95786 925 aaKnown RBP24.1■■□□□ 1.45
CTNND2-201ENST00000304623 GNAI1P63096 354 aa24.1■■□□□ 1.45
CTNND2-201ENST00000304623 G3BP1Q13283 466 aaKnown RBP eCLIP24.1■■□□□ 1.45
CTNND2-201ENST00000304623 EIF2S2P20042 333 aaKnown RBP24.1■■□□□ 1.45
CTNND2-201ENST00000304623 MTERF4Q7Z6M4 381 aaKnown RBP24.1■■□□□ 1.45
CTNND2-201ENST00000304623 AMOTL1Q8IY63 956 aa24.1■■□□□ 1.45
CTNND2-201ENST00000304623 TTC5Q8N0Z6 440 aa24.09■■□□□ 1.45
CTNND2-201ENST00000304623 ACBD3Q9H3P7 528 aa24.09■■□□□ 1.45
CTNND2-201ENST00000304623 IFT57Q9NWB7 429 aa24.09■■□□□ 1.45
CTNND2-201ENST00000304623 ERC2O15083 957 aa24.08■■□□□ 1.45
CTNND2-201ENST00000304623 LNPKQ9C0E8 428 aa24.08■■□□□ 1.45
CTNND2-201ENST00000304623 CDC45O75419 566 aa24.08■■□□□ 1.45
CTNND2-201ENST00000304623 MNS1Q8NEH6 495 aa24.08■■□□□ 1.45
CTNND2-201ENST00000304623 MAP7D2Q96T17 732 aa24.08■■□□□ 1.45
CTNND2-201ENST00000304623 CNTLNQ9NXG0 1405 aa24.08■■□□□ 1.44
CTNND2-201ENST00000304623 FKBP5Q13451 457 aaPredicted RBP24.07■■□□□ 1.44
CTNND2-201ENST00000304623 JPH4Q96JJ6 628 aa24.07■■□□□ 1.44
CTNND2-201ENST00000304623 NASPP49321 788 aaPredicted RBP24.07■■□□□ 1.44
CTNND2-201ENST00000304623 MINK1Q8N4C8 1332 aaPredicted RBP24.06■■□□□ 1.44
CTNND2-201ENST00000304623 NOL10Q9BSC4 688 aaKnown RBP24.06■■□□□ 1.44
CTNND2-201ENST00000304623 APPP05067 770 aa24.05■■□□□ 1.44
CTNND2-201ENST00000304623 KIF7Q2M1P5 1343 aa24.05■■□□□ 1.44
CTNND2-201ENST00000304623 STAC3Q96MF2 364 aa24.05■■□□□ 1.44
CTNND2-201ENST00000304623 CDR1P51861 262 aa24.04■■□□□ 1.44
CTNND2-201ENST00000304623 AK7Q96M32 723 aa24.03■■□□□ 1.44
CTNND2-201ENST00000304623 NAT10Q9H0A0 1025 aaKnown RBP24.03■■□□□ 1.44
CTNND2-201ENST00000304623 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
CTNND2-201ENST00000304623 SAFBQ15424 915 aaKnown RBP eCLIP24.02■■□□□ 1.44
CTNND2-201ENST00000304623 BRD4O60885 1362 aaPredicted RBP24.02■■□□□ 1.44
CTNND2-201ENST00000304623 RUFY1Q96T51 708 aa24.02■■□□□ 1.44
CTNND2-201ENST00000304623 LETM1O95202 739 aaPredicted RBP24.01■■□□□ 1.43
CTNND2-201ENST00000304623 NOM1Q5C9Z4 860 aaKnown RBP24.01■■□□□ 1.43
CTNND2-201ENST00000304623 NFXL1Q6ZNB6 911 aa24.01■■□□□ 1.43
CTNND2-201ENST00000304623 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.01■■□□□ 1.43
CTNND2-201ENST00000304623 R3HCC1Q9Y3T6 440 aaKnown RBP24.01■■□□□ 1.43
CTNND2-201ENST00000304623 ERICH2A1L162 156 aa24■■□□□ 1.43
CTNND2-201ENST00000304623 HSP90B2PQ58FF3 399 aa24■■□□□ 1.43
CTNND2-201ENST00000304623 MBD3O95983 291 aa24■■□□□ 1.43
CTNND2-201ENST00000304623 MIA2Q96PC5 1412 aa24■■□□□ 1.43
CTNND2-201ENST00000304623 PANK1Q8TE04 598 aa24■■□□□ 1.43
CTNND2-201ENST00000304623 TRAK2O60296 914 aa23.99■■□□□ 1.43
CTNND2-201ENST00000304623 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.99■■□□□ 1.43
CTNND2-201ENST00000304623 WIZO95785 1651 aa23.98■■□□□ 1.43
CTNND2-201ENST00000304623 PATL2C9JE40 543 aaKnown RBP23.98■■□□□ 1.43
CTNND2-201ENST00000304623 NECTIN2Q92692 538 aa23.98■■□□□ 1.43
CTNND2-201ENST00000304623 MYOM3Q5VTT5 1437 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms