RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 IQGAP1P46940 1657 aa26.68■■□□□ 1.86
NFIL3-201ENST00000297689 PPRC1Q5VV67 1664 aaKnown RBP26.68■■□□□ 1.86
NFIL3-201ENST00000297689 EFCAB6Q5THR3 1501 aa26.68■■□□□ 1.86
NFIL3-201ENST00000297689 LMTK2Q8IWU2 1503 aa26.67■■□□□ 1.86
NFIL3-201ENST00000297689 NEURL4Q96JN8 1562 aa26.67■■□□□ 1.86
NFIL3-201ENST00000297689 TMF1P82094 1093 aa26.65■■□□□ 1.86
NFIL3-201ENST00000297689 INSRP06213 1382 aa26.65■■□□□ 1.86
NFIL3-201ENST00000297689 TSPOAP1O95153 1857 aa26.64■■□□□ 1.86
NFIL3-201ENST00000297689 RAPGEF3O95398 923 aa26.64■■□□□ 1.85
NFIL3-201ENST00000297689 RICTORQ6R327 1708 aa26.63■■□□□ 1.85
NFIL3-201ENST00000297689 ZMYM4Q5VZL5 1548 aa26.63■■□□□ 1.85
NFIL3-201ENST00000297689 UGGT1Q9NYU2 1555 aa26.62■■□□□ 1.85
NFIL3-201ENST00000297689 PANK3Q9H999 370 aa26.61■■□□□ 1.85
NFIL3-201ENST00000297689 B4GALNT3Q6L9W6 998 aa26.61■■□□□ 1.85
NFIL3-201ENST00000297689 DIP2CQ9Y2E4 1556 aa26.59■■□□□ 1.85
NFIL3-201ENST00000297689 KIAA1210Q9ULL0 1709 aa26.57■■□□□ 1.84
NFIL3-201ENST00000297689 SCAF11Q99590 1463 aaKnown RBP26.57■■□□□ 1.84
NFIL3-201ENST00000297689 ANP32EQ9BTT0 268 aa26.56■■□□□ 1.84
NFIL3-201ENST00000297689 KIF1BO60333 1816 aa26.54■■□□□ 1.84
NFIL3-201ENST00000297689 FANCIQ9NVI1 1328 aa26.53■■□□□ 1.84
NFIL3-201ENST00000297689 MROH2AA6NES4 1674 aa26.53■■□□□ 1.84
NFIL3-201ENST00000297689 BLMP54132 1417 aaPredicted RBP26.52■■□□□ 1.84
NFIL3-201ENST00000297689 GGT6Q6P531 493 aa26.52■■□□□ 1.84
NFIL3-201ENST00000297689 SENP3-EIF4A1A0A087X0R7 540 aa26.51■■□□□ 1.83
NFIL3-201ENST00000297689 PDE3BQ13370 1112 aa26.51■■□□□ 1.83
NFIL3-201ENST00000297689 ABCC3O15438 1527 aa26.51■■□□□ 1.83
NFIL3-201ENST00000297689 NPATQ14207 1427 aa26.51■■□□□ 1.83
NFIL3-201ENST00000297689 CC2D1BQ5T0F9 858 aaKnown RBP26.51■■□□□ 1.83
NFIL3-201ENST00000297689 IFT172Q9UG01 1749 aa26.5■■□□□ 1.83
NFIL3-201ENST00000297689 MYOM2P54296 1465 aa26.49■■□□□ 1.83
NFIL3-201ENST00000297689 SYNMO15061 1565 aa26.49■■□□□ 1.83
NFIL3-201ENST00000297689 YEATS2Q9ULM3 1422 aa26.48■■□□□ 1.83
NFIL3-201ENST00000297689 CFAP65Q6ZU64 1925 aaKnown RBP26.47■■□□□ 1.83
NFIL3-201ENST00000297689 CAMSAP1Q5T5Y3 1602 aa26.46■■□□□ 1.83
NFIL3-201ENST00000297689 AMER1Q5JTC6 1135 aaPredicted RBP26.45■■□□□ 1.82
NFIL3-201ENST00000297689 ADGRB3O60242 1522 aa26.44■■□□□ 1.82
NFIL3-201ENST00000297689 MYOM1P52179 1685 aa26.44■■□□□ 1.82
NFIL3-201ENST00000297689 CDCA8Q53HL2 280 aa26.44■■□□□ 1.82
NFIL3-201ENST00000297689 SIGLEC1Q9BZZ2 1709 aa26.43■■□□□ 1.82
NFIL3-201ENST00000297689 NRXN1Q9ULB1 1477 aa26.42■■□□□ 1.82
NFIL3-201ENST00000297689 MSH5O43196 834 aa26.42■■□□□ 1.82
NFIL3-201ENST00000297689 NPC1L1Q9UHC9 1359 aa26.41■■□□□ 1.82
NFIL3-201ENST00000297689 ADGRF5Q8IZF2 1346 aa26.41■■□□□ 1.82
NFIL3-201ENST00000297689 EIF3AQ14152 1382 aaKnown RBP26.4■■□□□ 1.82
NFIL3-201ENST00000297689 RRP1P56182 461 aaKnown RBP26.4■■□□□ 1.82
NFIL3-201ENST00000297689 RCAN3Q9UKA8 241 aa26.38■■□□□ 1.81
NFIL3-201ENST00000297689 ASXL1Q8IXJ9 1541 aa26.37■■□□□ 1.81
NFIL3-201ENST00000297689 NOS1P29475 1434 aa26.37■■□□□ 1.81
NFIL3-201ENST00000297689 KNSTRNQ9Y448 316 aa26.37■■□□□ 1.81
NFIL3-201ENST00000297689 CCDC136Q96JN2 1154 aa26.37■■□□□ 1.81
NFIL3-201ENST00000297689 PPP2R1AP30153 589 aa26.36■■□□□ 1.81
NFIL3-201ENST00000297689 ZC3H13Q5T200 1668 aaKnown RBP26.35■■□□□ 1.81
NFIL3-201ENST00000297689 CFAP70Q5T0N1 1121 aa26.35■■□□□ 1.81
NFIL3-201ENST00000297689 PPLO60437 1756 aa26.35■■□□□ 1.81
NFIL3-201ENST00000297689 CDCA7LQ96GN5 454 aa26.34■■□□□ 1.81
NFIL3-201ENST00000297689 PIK3C2BO00750 1634 aa26.34■■□□□ 1.81
NFIL3-201ENST00000297689 KDM5AP29375 1690 aaKnown RBP26.34■■□□□ 1.81
NFIL3-201ENST00000297689 SLC24A1O60721 1099 aa26.34■■□□□ 1.81
NFIL3-201ENST00000297689 ERVK-7P63135 1459 aa26.33■■□□□ 1.81
NFIL3-201ENST00000297689 PIK3C2GO75747 1445 aa26.33■■□□□ 1.81
NFIL3-201ENST00000297689 MYO3AQ8NEV4 1616 aa26.32■■□□□ 1.8
NFIL3-201ENST00000297689 ARHGAP31Q2M1Z3 1444 aa26.32■■□□□ 1.8
NFIL3-201ENST00000297689 ADAMTS8Q9UP79 889 aa26.32■■□□□ 1.8
NFIL3-201ENST00000297689 SALL2Q9Y467 1007 aaPredicted RBP26.32■■□□□ 1.8
NFIL3-201ENST00000297689 SBNO2Q9Y2G9 1366 aa26.31■■□□□ 1.8
NFIL3-201ENST00000297689 CHGAP10645 457 aaKnown RBP26.3■■□□□ 1.8
NFIL3-201ENST00000297689 SETBP1Q9Y6X0 1596 aa26.29■■□□□ 1.8
NFIL3-201ENST00000297689 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
NFIL3-201ENST00000297689 EXOC6Q8TAG9 804 aa26.25■■□□□ 1.79
NFIL3-201ENST00000297689 ZNF521Q96K83 1311 aa26.24■■□□□ 1.79
NFIL3-201ENST00000297689 REREQ9P2R6 1566 aa26.22■■□□□ 1.79
NFIL3-201ENST00000297689 RPGRIP1LQ68CZ1 1315 aa26.22■■□□□ 1.79
NFIL3-201ENST00000297689 PREX1Q8TCU6 1659 aa26.21■■□□□ 1.79
NFIL3-201ENST00000297689 PLEKHH1Q9ULM0 1364 aa26.21■■□□□ 1.79
NFIL3-201ENST00000297689 NEXMIFQ5QGS0 1516 aa26.19■■□□□ 1.78
NFIL3-201ENST00000297689 ADGRB1O14514 1584 aa26.19■■□□□ 1.78
NFIL3-201ENST00000297689 CARD14Q9BXL6 1004 aa26.19■■□□□ 1.78
NFIL3-201ENST00000297689 C14orf93Q9H972 538 aaKnown RBP26.18■■□□□ 1.78
NFIL3-201ENST00000297689 AGLP35573 1532 aa26.17■■□□□ 1.78
NFIL3-201ENST00000297689 ARHGEF40Q8TER5 1519 aa26.17■■□□□ 1.78
NFIL3-201ENST00000297689 IDI1Q13907 227 aa26.17■■□□□ 1.78
NFIL3-201ENST00000297689 WDR43Q15061 677 aaKnown RBP eCLIP26.16■■□□□ 1.78
NFIL3-201ENST00000297689 MYO5BQ9ULV0 1848 aa26.15■■□□□ 1.78
NFIL3-201ENST00000297689 DUSP27Q5VZP5 1158 aa26.14■■□□□ 1.77
NFIL3-201ENST00000297689 CENPJQ9HC77 1338 aaPredicted RBP26.13■■□□□ 1.77
NFIL3-201ENST00000297689 TMEM131LA2VDJ0 1609 aa26.12■■□□□ 1.77
NFIL3-201ENST00000297689 SLC52A1Q9NWF4 448 aa26.11■■□□□ 1.77
NFIL3-201ENST00000297689 NUTM2DQ5VT03 806 aaPredicted RBP26.1■■□□□ 1.77
NFIL3-201ENST00000297689 FBXO31Q5XUX0 539 aaPredicted RBP26.1■■□□□ 1.77
NFIL3-201ENST00000297689 TRMT2AQ8IZ69 625 aaKnown RBP26.1■■□□□ 1.77
NFIL3-201ENST00000297689 PLIN1O60240 522 aa26.08■■□□□ 1.77
NFIL3-201ENST00000297689 TMEM132EQ6IEE7 984 aa26.08■■□□□ 1.77
NFIL3-201ENST00000297689 CLTCQ00610 1675 aaKnown RBP26.08■■□□□ 1.77
NFIL3-201ENST00000297689 QRICH2Q9H0J4 1663 aa26.08■■□□□ 1.76
NFIL3-201ENST00000297689 VGFO15240 615 aaPredicted RBP26.07■■□□□ 1.76
NFIL3-201ENST00000297689 GOLGA2Q08379 1002 aa26.07■■□□□ 1.76
NFIL3-201ENST00000297689 TRAK1Q9UPV9 953 aa26.07■■□□□ 1.76
NFIL3-201ENST00000297689 ZFYVE9O95405 1425 aa26.05■■□□□ 1.76
NFIL3-201ENST00000297689 SLFN5Q08AF3 891 aa26.05■■□□□ 1.76
NFIL3-201ENST00000297689 POLR3AO14802 1390 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms