RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 SPAG9O60271 1321 aaKnown RBP16.06■□□□□ 0.16
TMEM200A-201ENST00000296978 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
TMEM200A-201ENST00000296978 POGKQ9P215 609 aa16.06■□□□□ 0.16
TMEM200A-201ENST00000296978 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
TMEM200A-201ENST00000296978 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
TMEM200A-201ENST00000296978 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
TMEM200A-201ENST00000296978 PLEKHH2Q8IVE3 1493 aa16.03■□□□□ 0.16
TMEM200A-201ENST00000296978 MAPK8IP3Q9UPT6 1336 aa16.03■□□□□ 0.16
TMEM200A-201ENST00000296978 ATP10BO94823 1461 aa16.03■□□□□ 0.16
TMEM200A-201ENST00000296978 KDM2BQ8NHM5 1336 aa16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 ADGRL2O95490 1459 aa16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 CCDC141Q6ZP82 1450 aa16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 PMFBP1Q8TBY8 1022 aa16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 NAP1L5Q96NT1 182 aaPredicted RBP16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 RWDD1Q9H446 243 aaPredicted RBP16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 ITSN2Q9NZM3 1697 aa16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 SEC24BO95487 1268 aa16.02■□□□□ 0.16
TMEM200A-201ENST00000296978 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.15
TMEM200A-201ENST00000296978 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
TMEM200A-201ENST00000296978 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.15
TMEM200A-201ENST00000296978 ITPRIPQ8IWB1 547 aa16.02■□□□□ 0.15
TMEM200A-201ENST00000296978 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.15
TMEM200A-201ENST00000296978 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
TMEM200A-201ENST00000296978 FAM135AQ9P2D6 1515 aa16.01■□□□□ 0.15
TMEM200A-201ENST00000296978 TCP11L2Q8N4U5 519 aa16.01■□□□□ 0.15
TMEM200A-201ENST00000296978 EIF3AQ14152 1382 aaKnown RBP16■□□□□ 0.15
TMEM200A-201ENST00000296978 SMC4Q9NTJ3 1288 aa16■□□□□ 0.15
TMEM200A-201ENST00000296978 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
TMEM200A-201ENST00000296978 GGT6Q6P531 493 aa15.99■□□□□ 0.15
TMEM200A-201ENST00000296978 WWC1Q8IX03 1113 aa15.98■□□□□ 0.15
TMEM200A-201ENST00000296978 SLC12A5Q9H2X9 1139 aa15.98■□□□□ 0.15
TMEM200A-201ENST00000296978 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
TMEM200A-201ENST00000296978 TNNQ9UQP3 1299 aa15.98■□□□□ 0.15
TMEM200A-201ENST00000296978 L1TD1Q5T7N2 865 aaKnown RBP15.98■□□□□ 0.15
TMEM200A-201ENST00000296978 A2MP01023 1474 aa15.98■□□□□ 0.15
TMEM200A-201ENST00000296978 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
TMEM200A-201ENST00000296978 STK26Q9P289 416 aa15.98■□□□□ 0.15
TMEM200A-201ENST00000296978 KANK1Q14678 1352 aa15.97■□□□□ 0.15
TMEM200A-201ENST00000296978 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
TMEM200A-201ENST00000296978 MTHFSP49914 203 aa15.97■□□□□ 0.15
TMEM200A-201ENST00000296978 PDE3AQ14432 1141 aa15.97■□□□□ 0.15
TMEM200A-201ENST00000296978 GOLGA6L3A6NEY3 463 aa15.96■□□□□ 0.15
TMEM200A-201ENST00000296978 HSCBQ8IWL3 235 aa15.96■□□□□ 0.15
TMEM200A-201ENST00000296978 PKNOX2Q96KN3 472 aa15.95■□□□□ 0.14
TMEM200A-201ENST00000296978 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
TMEM200A-201ENST00000296978 MYH16Q9H6N6 1097 aa15.95■□□□□ 0.14
TMEM200A-201ENST00000296978 ADGBQ8N7X0 1667 aa15.95■□□□□ 0.14
TMEM200A-201ENST00000296978 POLR1AO95602 1720 aaPredicted RBP15.94■□□□□ 0.14
TMEM200A-201ENST00000296978 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
TMEM200A-201ENST00000296978 NKTRP30414 1462 aaKnown RBP15.94■□□□□ 0.14
TMEM200A-201ENST00000296978 TSR2Q969E8 191 aaKnown RBP15.94■□□□□ 0.14
TMEM200A-201ENST00000296978 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
TMEM200A-201ENST00000296978 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
TMEM200A-201ENST00000296978 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
TMEM200A-201ENST00000296978 ZMYM4Q5VZL5 1548 aa15.92■□□□□ 0.14
TMEM200A-201ENST00000296978 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
TMEM200A-201ENST00000296978 TRIM44Q96DX7 344 aaPredicted RBP15.92■□□□□ 0.14
TMEM200A-201ENST00000296978 ZKSCAN2Q63HK3 967 aa15.92■□□□□ 0.14
TMEM200A-201ENST00000296978 PCDHB15Q9Y5E8 787 aa15.92■□□□□ 0.14
TMEM200A-201ENST00000296978 RARSP54136 660 aaKnown RBP15.9■□□□□ 0.14
TMEM200A-201ENST00000296978 DZIP1LQ8IYY4 767 aaKnown RBP15.9■□□□□ 0.14
TMEM200A-201ENST00000296978 SYCP2Q9BX26 1530 aa15.9■□□□□ 0.14
TMEM200A-201ENST00000296978 RLBP1P12271 317 aa15.9■□□□□ 0.14
TMEM200A-201ENST00000296978 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
TMEM200A-201ENST00000296978 NCLP19338 710 aaKnown RBP15.9■□□□□ 0.14
TMEM200A-201ENST00000296978 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
TMEM200A-201ENST00000296978 MAGI2Q86UL8 1455 aa15.9■□□□□ 0.14
TMEM200A-201ENST00000296978 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
TMEM200A-201ENST00000296978 ADGRF5Q8IZF2 1346 aa15.89■□□□□ 0.13
TMEM200A-201ENST00000296978 TBC1D2Q9BYX2 928 aa15.89■□□□□ 0.13
TMEM200A-201ENST00000296978 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
TMEM200A-201ENST00000296978 ELL2O00472 640 aaPredicted RBP15.89■□□□□ 0.13
TMEM200A-201ENST00000296978 GPRASP1Q5JY77 1395 aa15.88■□□□□ 0.13
TMEM200A-201ENST00000296978 LNPKQ9C0E8 428 aa15.88■□□□□ 0.13
TMEM200A-201ENST00000296978 RSPH6AQ9H0K4 717 aa15.87■□□□□ 0.13
TMEM200A-201ENST00000296978 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
TMEM200A-201ENST00000296978 PLA2R1Q13018 1463 aa15.86■□□□□ 0.13
TMEM200A-201ENST00000296978 ANP32BQ92688 251 aaKnown RBP15.86■□□□□ 0.13
TMEM200A-201ENST00000296978 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
TMEM200A-201ENST00000296978 CEP170Q5SW79 1584 aa15.86■□□□□ 0.13
TMEM200A-201ENST00000296978 FAM43AQ8N2R8 423 aa15.85■□□□□ 0.13
TMEM200A-201ENST00000296978 ABCC10Q5T3U5 1492 aa15.85■□□□□ 0.13
TMEM200A-201ENST00000296978 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
TMEM200A-201ENST00000296978 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
TMEM200A-201ENST00000296978 KDM5DQ9BY66 1539 aa15.85■□□□□ 0.13
TMEM200A-201ENST00000296978 ZNF521Q96K83 1311 aa15.85■□□□□ 0.13
TMEM200A-201ENST00000296978 NGEFQ8N5V2 710 aa15.85■□□□□ 0.13
TMEM200A-201ENST00000296978 APBB1O00213 710 aa15.84■□□□□ 0.13
TMEM200A-201ENST00000296978 CHMP5Q9NZZ3 219 aa15.84■□□□□ 0.13
TMEM200A-201ENST00000296978 SCAF11Q99590 1463 aaKnown RBP15.84■□□□□ 0.13
TMEM200A-201ENST00000296978 ASXL1Q8IXJ9 1541 aa15.83■□□□□ 0.13
TMEM200A-201ENST00000296978 TRAK2O60296 914 aa15.83■□□□□ 0.12
TMEM200A-201ENST00000296978 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.12
TMEM200A-201ENST00000296978 MCM4P33991 863 aa15.82■□□□□ 0.12
TMEM200A-201ENST00000296978 MVPQ14764 893 aaKnown RBP15.82■□□□□ 0.12
TMEM200A-201ENST00000296978 ANKRD45Q5TZF3 282 aa15.82■□□□□ 0.12
TMEM200A-201ENST00000296978 GLIPR1L2Q4G1C9 344 aa15.81■□□□□ 0.12
TMEM200A-201ENST00000296978 TBC1D32Q96NH3 1257 aa15.81■□□□□ 0.12
TMEM200A-201ENST00000296978 RIPK4P57078 832 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms