RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 NPDC1Q9NQX5 325 aaPredicted RBP12.28□□□□□ -0.44
PRKAA1-201ENST00000296800 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
PRKAA1-201ENST00000296800 TTC13Q8NBP0 860 aa12.26□□□□□ -0.45
PRKAA1-201ENST00000296800 COPS2P61201 443 aa12.25□□□□□ -0.45
PRKAA1-201ENST00000296800 ARHGEF1Q92888 912 aaKnown RBP12.25□□□□□ -0.45
PRKAA1-201ENST00000296800 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
PRKAA1-201ENST00000296800 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
PRKAA1-201ENST00000296800 PADI6Q6TGC4 694 aa12.23□□□□□ -0.45
PRKAA1-201ENST00000296800 ZNF775Q96BV0 537 aaPredicted RBP12.22□□□□□ -0.45
PRKAA1-201ENST00000296800 MLLT3P42568 568 aaPredicted RBP12.21□□□□□ -0.45
PRKAA1-201ENST00000296800 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.45
PRKAA1-201ENST00000296800 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
PRKAA1-201ENST00000296800 GGCXP38435 758 aa12.2□□□□□ -0.46
PRKAA1-201ENST00000296800 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
PRKAA1-201ENST00000296800 TRIM67Q6ZTA4 783 aa12.16□□□□□ -0.46
PRKAA1-201ENST00000296800 EYA1Q99502 592 aa12.16□□□□□ -0.46
PRKAA1-201ENST00000296800 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
PRKAA1-201ENST00000296800 ZPR1O75312 459 aa12.15□□□□□ -0.46
PRKAA1-201ENST00000296800 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
PRKAA1-201ENST00000296800 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
PRKAA1-201ENST00000296800 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
PRKAA1-201ENST00000296800 PTGDRQ13258 359 aa12.12□□□□□ -0.47
PRKAA1-201ENST00000296800 EMID1Q96A84 441 aaPredicted RBP12.12□□□□□ -0.47
PRKAA1-201ENST00000296800 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
PRKAA1-201ENST00000296800 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
PRKAA1-201ENST00000296800 SLC19A1P41440 591 aa12.1□□□□□ -0.47
PRKAA1-201ENST00000296800 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
PRKAA1-201ENST00000296800 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
PRKAA1-201ENST00000296800 BLOC1S3Q6QNY0 202 aa12.08□□□□□ -0.48
PRKAA1-201ENST00000296800 MYT1Q01538 1121 aa12.07□□□□□ -0.48
PRKAA1-201ENST00000296800 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
PRKAA1-201ENST00000296800 POTECB2RU33 542 aa12.06□□□□□ -0.48
PRKAA1-201ENST00000296800 TLL1O43897 1013 aa12.06□□□□□ -0.48
PRKAA1-201ENST00000296800 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
PRKAA1-201ENST00000296800 NUTM2FA1L443 756 aa12.05□□□□□ -0.48
PRKAA1-201ENST00000296800 SPRYD7Q5W111 196 aa12.05□□□□□ -0.48
PRKAA1-201ENST00000296800 DNAJB2P25686 324 aa12.04□□□□□ -0.48
PRKAA1-201ENST00000296800 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
PRKAA1-201ENST00000296800 ADGRG1Q9Y653 693 aa12.04□□□□□ -0.48
PRKAA1-201ENST00000296800 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
PRKAA1-201ENST00000296800 PRR14Q9BWN1 585 aa12.03□□□□□ -0.48
PRKAA1-201ENST00000296800 DGAT1O75907 488 aa12.02□□□□□ -0.49
PRKAA1-201ENST00000296800 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
PRKAA1-201ENST00000296800 SEMA3EO15041 775 aa12.01□□□□□ -0.49
PRKAA1-201ENST00000296800 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
PRKAA1-201ENST00000296800 TMEM134Q9H6X4 195 aa12.01□□□□□ -0.49
PRKAA1-201ENST00000296800 LIAT1Q6ZQX7 453 aa12□□□□□ -0.49
PRKAA1-201ENST00000296800 FCHSD2O94868 740 aa11.99□□□□□ -0.49
PRKAA1-201ENST00000296800 S1PR4O95977 384 aa11.99□□□□□ -0.49
PRKAA1-201ENST00000296800 PRR20EP86478 221 aa11.99□□□□□ -0.49
PRKAA1-201ENST00000296800 PRR20CP86479 221 aa11.99□□□□□ -0.49
PRKAA1-201ENST00000296800 PRR20DP86480 221 aa11.99□□□□□ -0.49
PRKAA1-201ENST00000296800 PRR20BP86481 221 aa11.99□□□□□ -0.49
PRKAA1-201ENST00000296800 PRR20AP86496 221 aa11.99□□□□□ -0.49
PRKAA1-201ENST00000296800 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
PRKAA1-201ENST00000296800 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
PRKAA1-201ENST00000296800 ANKLE1Q8NAG6 615 aa11.98□□□□□ -0.49
PRKAA1-201ENST00000296800 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
PRKAA1-201ENST00000296800 FAM187AA6NFU0 413 aa11.97□□□□□ -0.49
PRKAA1-201ENST00000296800 TNFRSF10AO00220 468 aa11.97□□□□□ -0.49
PRKAA1-201ENST00000296800 ZNF697Q5TEC3 545 aa11.97□□□□□ -0.49
PRKAA1-201ENST00000296800 GDF9O60383 454 aa11.94□□□□□ -0.5
PRKAA1-201ENST00000296800 LOC105371045A0A1W2PR82 267 aa11.93□□□□□ -0.5
PRKAA1-201ENST00000296800 KMT5BQ4FZB7 885 aa11.93□□□□□ -0.5
PRKAA1-201ENST00000296800 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
PRKAA1-201ENST00000296800 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
PRKAA1-201ENST00000296800 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
PRKAA1-201ENST00000296800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.92□□□□□ -0.5
PRKAA1-201ENST00000296800 ST8SIA5O15466 376 aa11.92□□□□□ -0.5
PRKAA1-201ENST00000296800 ACTN4O43707 911 aaKnown RBP11.92□□□□□ -0.5
PRKAA1-201ENST00000296800 CUX2O14529 1486 aa11.91□□□□□ -0.5
PRKAA1-201ENST00000296800 OATP04181 439 aa11.91□□□□□ -0.5
PRKAA1-201ENST00000296800 CFHP08603 1231 aa11.9□□□□□ -0.5
PRKAA1-201ENST00000296800 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
PRKAA1-201ENST00000296800 PLA2G2CQ5R387 149 aa11.9□□□□□ -0.5
PRKAA1-201ENST00000296800 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
PRKAA1-201ENST00000296800 SLC10A3P09131 477 aa11.89□□□□□ -0.51
PRKAA1-201ENST00000296800 HIC1Q14526 733 aa11.89□□□□□ -0.51
PRKAA1-201ENST00000296800 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
PRKAA1-201ENST00000296800 ADH1BP00325 375 aa11.88□□□□□ -0.51
PRKAA1-201ENST00000296800 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
PRKAA1-201ENST00000296800 AAASQ9NRG9 546 aa11.88□□□□□ -0.51
PRKAA1-201ENST00000296800 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
PRKAA1-201ENST00000296800 SMYD5Q6GMV2 418 aa11.87□□□□□ -0.51
PRKAA1-201ENST00000296800 LCE2AQ5TA79 106 aaPredicted RBP11.86□□□□□ -0.51
PRKAA1-201ENST00000296800 TREML4Q6UXN2 200 aa11.86□□□□□ -0.51
PRKAA1-201ENST00000296800 EEA1Q15075 1411 aa11.86□□□□□ -0.51
PRKAA1-201ENST00000296800 SLC6A16Q9GZN6 736 aa11.85□□□□□ -0.51
PRKAA1-201ENST00000296800 METTL3Q86U44 580 aaKnown RBP11.84□□□□□ -0.51
PRKAA1-201ENST00000296800 NR1I2O75469 434 aa11.83□□□□□ -0.52
PRKAA1-201ENST00000296800 GNPATO15228 680 aa11.82□□□□□ -0.52
PRKAA1-201ENST00000296800 HRCP23327 699 aa11.82□□□□□ -0.52
PRKAA1-201ENST00000296800 FOXC1Q12948 553 aa11.82□□□□□ -0.52
PRKAA1-201ENST00000296800 PKD2L1Q9P0L9 805 aa11.82□□□□□ -0.52
PRKAA1-201ENST00000296800 FECHP22830 423 aa11.81□□□□□ -0.52
PRKAA1-201ENST00000296800 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
PRKAA1-201ENST00000296800 SCUBE3Q8IX30 993 aa11.8□□□□□ -0.52
PRKAA1-201ENST00000296800 FAM9AQ8IZU1 332 aaPredicted RBP11.8□□□□□ -0.52
PRKAA1-201ENST00000296800 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
PRKAA1-201ENST00000296800 DACH1Q9UI36 760 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms