RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 KANK1Q14678 1352 aa28.21■■■□□ 2.11
LRPAP1-201ENST00000296325 KANK4Q5T7N3 995 aaPredicted RBP28.2■■■□□ 2.1
LRPAP1-201ENST00000296325 ZNF772Q68DY9 489 aaPredicted RBP28.18■■■□□ 2.1
LRPAP1-201ENST00000296325 ZFYVE9O95405 1425 aa28.18■■■□□ 2.1
LRPAP1-201ENST00000296325 VPS8Q8N3P4 1428 aa28.18■■■□□ 2.1
LRPAP1-201ENST00000296325 CHD2O14647 1828 aaKnown RBP28.17■■■□□ 2.1
LRPAP1-201ENST00000296325 NCOA3Q9Y6Q9 1424 aa28.17■■■□□ 2.1
LRPAP1-201ENST00000296325 AHDC1Q5TGY3 1603 aaPredicted RBP28.15■■■□□ 2.1
LRPAP1-201ENST00000296325 PLEKHG1Q9ULL1 1385 aa28.14■■■□□ 2.1
LRPAP1-201ENST00000296325 SLC52A1Q9NWF4 448 aa28.14■■■□□ 2.1
LRPAP1-201ENST00000296325 SHPRHQ149N8 1683 aa28.13■■■□□ 2.09
LRPAP1-201ENST00000296325 TRIM52Q96A61 297 aa28.13■■■□□ 2.09
LRPAP1-201ENST00000296325 CDK12Q9NYV4 1490 aaPredicted RBP28.12■■■□□ 2.09
LRPAP1-201ENST00000296325 DAPK1P53355 1430 aa28.1■■■□□ 2.09
LRPAP1-201ENST00000296325 MEX3CQ5U5Q3 659 aaKnown RBP28.08■■■□□ 2.09
LRPAP1-201ENST00000296325 PTPN23Q9H3S7 1636 aa28.07■■■□□ 2.08
LRPAP1-201ENST00000296325 BCANQ96GW7 911 aa28.06■■■□□ 2.08
LRPAP1-201ENST00000296325 TBX22Q9Y458 520 aa28.06■■■□□ 2.08
LRPAP1-201ENST00000296325 DIP2AQ14689 1571 aa28.06■■■□□ 2.08
LRPAP1-201ENST00000296325 RXRBP28702 533 aa28.05■■■□□ 2.08
LRPAP1-201ENST00000296325 RPRD2Q5VT52 1461 aaKnown RBP28.05■■■□□ 2.08
LRPAP1-201ENST00000296325 RIMS2Q9UQ26 1411 aa28.04■■■□□ 2.08
LRPAP1-201ENST00000296325 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.04■■■□□ 2.08
LRPAP1-201ENST00000296325 CADPS2Q86UW7 1296 aa28.03■■■□□ 2.08
LRPAP1-201ENST00000296325 ANKRD30AQ9BXX3 1397 aa28.02■■■□□ 2.08
LRPAP1-201ENST00000296325 MYO5BQ9ULV0 1848 aa28.02■■■□□ 2.08
LRPAP1-201ENST00000296325 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.08
LRPAP1-201ENST00000296325 TMEM131LA2VDJ0 1609 aa28.01■■■□□ 2.07
LRPAP1-201ENST00000296325 C19orf44Q9H6X5 657 aa28.01■■■□□ 2.07
LRPAP1-201ENST00000296325 GCC2Q8IWJ2 1684 aa27.98■■■□□ 2.07
LRPAP1-201ENST00000296325 PIK3R4Q99570 1358 aa27.98■■■□□ 2.07
LRPAP1-201ENST00000296325 PPP1R15AO75807 674 aaPredicted RBP27.96■■■□□ 2.07
LRPAP1-201ENST00000296325 HDGFP51858 240 aaKnown RBP27.96■■■□□ 2.07
LRPAP1-201ENST00000296325 BRINP3Q76B58 766 aa27.96■■■□□ 2.07
LRPAP1-201ENST00000296325 C14orf37Q86TY3 774 aa27.95■■■□□ 2.06
LRPAP1-201ENST00000296325 ATF3P18847 181 aa27.94■■■□□ 2.06
LRPAP1-201ENST00000296325 CHIC2Q9UKJ5 165 aa27.94■■■□□ 2.06
LRPAP1-201ENST00000296325 AFF2P51816 1311 aa27.93■■■□□ 2.06
LRPAP1-201ENST00000296325 SETD5Q9C0A6 1442 aa27.93■■■□□ 2.06
LRPAP1-201ENST00000296325 ADGRL2O95490 1459 aa27.93■■■□□ 2.06
LRPAP1-201ENST00000296325 RGS12O14924 1447 aa27.92■■■□□ 2.06
LRPAP1-201ENST00000296325 DCCP43146 1447 aa27.92■■■□□ 2.06
LRPAP1-201ENST00000296325 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.9■■■□□ 2.06
LRPAP1-201ENST00000296325 ASXL1Q8IXJ9 1541 aa27.89■■■□□ 2.06
LRPAP1-201ENST00000296325 NUTM2BA6NNL0 878 aaPredicted RBP27.89■■■□□ 2.06
LRPAP1-201ENST00000296325 NUTM2EB1AL46 878 aaPredicted RBP27.89■■■□□ 2.06
LRPAP1-201ENST00000296325 NUTM2AQ8IVF1 878 aaPredicted RBP27.89■■■□□ 2.06
LRPAP1-201ENST00000296325 PTPRUQ92729 1446 aa27.87■■■□□ 2.05
LRPAP1-201ENST00000296325 NHSL1Q5SYE7 1610 aa27.85■■■□□ 2.05
LRPAP1-201ENST00000296325 ANKRD50Q9ULJ7 1429 aa27.84■■■□□ 2.05
LRPAP1-201ENST00000296325 TRPM2O94759 1503 aa27.84■■■□□ 2.05
LRPAP1-201ENST00000296325 RBM6P78332 1123 aaKnown RBP27.83■■■□□ 2.05
LRPAP1-201ENST00000296325 MST1RQ04912 1400 aa27.83■■■□□ 2.05
LRPAP1-201ENST00000296325 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
LRPAP1-201ENST00000296325 NUTM2DQ5VT03 806 aaPredicted RBP27.8■■■□□ 2.04
LRPAP1-201ENST00000296325 XRN1Q8IZH2 1706 aaKnown RBP27.79■■■□□ 2.04
LRPAP1-201ENST00000296325 QTRT2Q9H974 415 aaKnown RBP27.79■■■□□ 2.04
LRPAP1-201ENST00000296325 UNC13BO14795 1591 aa27.78■■■□□ 2.04
LRPAP1-201ENST00000296325 PNPLA6Q8IY17 1366 aa27.78■■■□□ 2.04
LRPAP1-201ENST00000296325 LRRC59Q96AG4 307 aaKnown RBP27.78■■■□□ 2.04
LRPAP1-201ENST00000296325 EP400Q96L91 3159 aa27.76■■■□□ 2.04
LRPAP1-201ENST00000296325 C8orf37Q96NL8 207 aa27.76■■■□□ 2.03
LRPAP1-201ENST00000296325 CHGAP10645 457 aaKnown RBP27.75■■■□□ 2.03
LRPAP1-201ENST00000296325 E9PCH4 1651 aa27.75■■■□□ 2.03
LRPAP1-201ENST00000296325 NRXN3Q9Y4C0 1643 aa27.74■■■□□ 2.03
LRPAP1-201ENST00000296325 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
LRPAP1-201ENST00000296325 SETBP1Q9Y6X0 1596 aa27.7■■■□□ 2.03
LRPAP1-201ENST00000296325 ATAD2Q6PL18 1390 aa27.7■■■□□ 2.02
LRPAP1-201ENST00000296325 DDX17Q92841 729 aaKnown RBP27.69■■■□□ 2.02
LRPAP1-201ENST00000296325 ADGRL3Q9HAR2 1447 aa27.67■■■□□ 2.02
LRPAP1-201ENST00000296325 NGLY1Q96IV0 654 aa27.67■■■□□ 2.02
LRPAP1-201ENST00000296325 LAMC1P11047 1609 aa27.65■■■□□ 2.02
LRPAP1-201ENST00000296325 IQGAP3Q86VI3 1631 aa27.63■■■□□ 2.01
LRPAP1-201ENST00000296325 METP08581 1390 aa27.63■■■□□ 2.01
LRPAP1-201ENST00000296325 APLP2Q06481 763 aa27.62■■■□□ 2.01
LRPAP1-201ENST00000296325 NALCNQ8IZF0 1738 aa27.61■■■□□ 2.01
LRPAP1-201ENST00000296325 ADAMTS2O95450 1211 aa27.6■■■□□ 2.01
LRPAP1-201ENST00000296325 C1orf167Q5SNV9 1468 aa27.59■■■□□ 2.01
LRPAP1-201ENST00000296325 FNBP4Q8N3X1 1017 aaPredicted RBP27.59■■■□□ 2.01
LRPAP1-201ENST00000296325 ZRANB1Q9UGI0 708 aa27.59■■■□□ 2.01
LRPAP1-201ENST00000296325 SOS2Q07890 1332 aaPredicted RBP27.58■■■□□ 2.01
LRPAP1-201ENST00000296325 ATRNO75882 1429 aa27.58■■■□□ 2
LRPAP1-201ENST00000296325 TRPC5Q9UL62 973 aaPredicted RBP27.57■■■□□ 2
LRPAP1-201ENST00000296325 FAM50AQ14320 339 aaKnown RBP27.56■■■□□ 2
LRPAP1-201ENST00000296325 USP21Q9UK80 565 aa27.56■■■□□ 2
LRPAP1-201ENST00000296325 PTCH1Q13635 1447 aa27.56■■■□□ 2
LRPAP1-201ENST00000296325 FOXD1Q16676 465 aa27.55■■■□□ 2
LRPAP1-201ENST00000296325 ROCK1Q13464 1354 aa27.5■■□□□ 1.99
LRPAP1-201ENST00000296325 COL22A1Q8NFW1 1626 aaPredicted RBP27.5■■□□□ 1.99
LRPAP1-201ENST00000296325 CCDC125Q86Z20 511 aa27.5■■□□□ 1.99
LRPAP1-201ENST00000296325 NUP155O75694 1391 aa27.48■■□□□ 1.99
LRPAP1-201ENST00000296325 MYOM2P54296 1465 aa27.47■■□□□ 1.99
LRPAP1-201ENST00000296325 ORAI2Q96SN7 254 aa27.47■■□□□ 1.99
LRPAP1-201ENST00000296325 BCL9LQ86UU0 1499 aa27.46■■□□□ 1.99
LRPAP1-201ENST00000296325 NEXMIFQ5QGS0 1516 aa27.46■■□□□ 1.99
LRPAP1-201ENST00000296325 PRAG1Q86YV5 1406 aa27.44■■□□□ 1.98
LRPAP1-201ENST00000296325 SPHKAPQ2M3C7 1700 aa27.44■■□□□ 1.98
LRPAP1-201ENST00000296325 ROBO2Q9HCK4 1378 aa27.4■■□□□ 1.98
LRPAP1-201ENST00000296325 ZNF326Q5BKZ1 582 aaKnown RBP27.4■■□□□ 1.98
LRPAP1-201ENST00000296325 GJD4Q96KN9 370 aaPredicted RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms