RNA–Protein interactions for RNA: ENST00000296210.11

TPRA1-201, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best) BASIC

Gene TPRA1, Length 1,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-201ENST00000296210 POLR1AO95602 1720 aaPredicted RBP37.73■■■■□ 3.63
TPRA1-201ENST00000296210 TMEM131LA2VDJ0 1609 aa37.71■■■■□ 3.63
TPRA1-201ENST00000296210 WASHC2AQ641Q2 1341 aa37.7■■■■□ 3.63
TPRA1-201ENST00000296210 A2ML1A8K2U0 1454 aa37.67■■■■□ 3.62
TPRA1-201ENST00000296210 KDM4FA0A1W2PPD8 638 aa37.67■■■■□ 3.62
TPRA1-201ENST00000296210 RALGAPBQ86X10 1494 aa37.66■■■■□ 3.62
TPRA1-201ENST00000296210 VGFO15240 615 aaPredicted RBP37.66■■■■□ 3.62
TPRA1-201ENST00000296210 HDGFP51858 240 aaKnown RBP37.64■■■■□ 3.62
TPRA1-201ENST00000296210 PRAG1Q86YV5 1406 aa37.63■■■■□ 3.61
TPRA1-201ENST00000296210 ANP32CO43423 234 aa37.63■■■■□ 3.61
TPRA1-201ENST00000296210 CCER2I3L3R5 266 aa37.61■■■■□ 3.61
TPRA1-201ENST00000296210 MYOM2P54296 1465 aa37.61■■■■□ 3.61
TPRA1-201ENST00000296210 NUTM2DQ5VT03 806 aaPredicted RBP37.6■■■■□ 3.61
TPRA1-201ENST00000296210 THEMISQ8N1K5 641 aaPredicted RBP37.6■■■■□ 3.61
TPRA1-201ENST00000296210 MYO3AQ8NEV4 1616 aa37.6■■■■□ 3.61
TPRA1-201ENST00000296210 CCDC7Q96M83 1385 aa37.59■■■■□ 3.61
TPRA1-201ENST00000296210 GTF3C3Q9Y5Q9 886 aa37.59■■■■□ 3.61
TPRA1-201ENST00000296210 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.58■■■■□ 3.61
TPRA1-201ENST00000296210 ADGRF5Q8IZF2 1346 aa37.57■■■■□ 3.61
TPRA1-201ENST00000296210 KDM5AP29375 1690 aaKnown RBP37.57■■■■□ 3.61
TPRA1-201ENST00000296210 MYO5BQ9ULV0 1848 aa37.57■■■■□ 3.61
TPRA1-201ENST00000296210 NEXMIFQ5QGS0 1516 aa37.57■■■■□ 3.6
TPRA1-201ENST00000296210 RIMS2Q9UQ26 1411 aa37.56■■■■□ 3.6
TPRA1-201ENST00000296210 SETD1BQ9UPS6 1966 aaKnown RBP37.54■■■■□ 3.6
TPRA1-201ENST00000296210 UBR1Q8IWV7 1749 aa37.54■■■■□ 3.6
TPRA1-201ENST00000296210 PPLO60437 1756 aa37.54■■■■□ 3.6
TPRA1-201ENST00000296210 IFT172Q9UG01 1749 aa37.54■■■■□ 3.6
TPRA1-201ENST00000296210 TMEM2Q9UHN6 1383 aa37.52■■■■□ 3.6
TPRA1-201ENST00000296210 CEP170BQ9Y4F5 1589 aaPredicted RBP37.52■■■■□ 3.6
TPRA1-201ENST00000296210 USP47Q96K76 1375 aa37.51■■■■□ 3.6
TPRA1-201ENST00000296210 ZFYVE9O95405 1425 aa37.51■■■■□ 3.6
TPRA1-201ENST00000296210 C11orf95C9JLR9 678 aaPredicted RBP37.5■■■■□ 3.59
TPRA1-201ENST00000296210 EID1Q9Y6B2 187 aa37.5■■■■□ 3.59
TPRA1-201ENST00000296210 ROCK2O75116 1388 aaKnown RBP37.49■■■■□ 3.59
TPRA1-201ENST00000296210 NRXN1Q9ULB1 1477 aa37.47■■■■□ 3.59
TPRA1-201ENST00000296210 CARD11Q9BXL7 1154 aa37.46■■■■□ 3.59
TPRA1-201ENST00000296210 TRPM1Q7Z4N2 1603 aa37.43■■■■□ 3.58
TPRA1-201ENST00000296210 TXNDC2Q86VQ3 553 aa37.43■■■■□ 3.58
TPRA1-201ENST00000296210 PIK3C2GO75747 1445 aa37.42■■■■□ 3.58
TPRA1-201ENST00000296210 CFAP70Q5T0N1 1121 aa37.42■■■■□ 3.58
TPRA1-201ENST00000296210 KIF7Q2M1P5 1343 aa37.42■■■■□ 3.58
TPRA1-201ENST00000296210 BCANQ96GW7 911 aa37.41■■■■□ 3.58
TPRA1-201ENST00000296210 NBPF1Q3BBV0 1214 aa37.41■■■■□ 3.58
TPRA1-201ENST00000296210 ZNF142P52746 1687 aaPredicted RBP37.4■■■■□ 3.58
TPRA1-201ENST00000296210 SENP3Q9H4L4 574 aaPredicted RBP37.4■■■■□ 3.58
TPRA1-201ENST00000296210 C14orf93Q9H972 538 aaKnown RBP37.39■■■■□ 3.58
TPRA1-201ENST00000296210 SLIT1O75093 1534 aa37.37■■■■□ 3.57
TPRA1-201ENST00000296210 ARHGAP23Q9P227 1491 aa37.36■■■■□ 3.57
TPRA1-201ENST00000296210 LAMC1P11047 1609 aa37.34■■■■□ 3.57
TPRA1-201ENST00000296210 LTKP29376 864 aa37.34■■■■□ 3.57
TPRA1-201ENST00000296210 ANKLE2Q86XL3 938 aa37.33■■■■□ 3.57
TPRA1-201ENST00000296210 GPRASP1Q5JY77 1395 aa37.33■■■■□ 3.57
TPRA1-201ENST00000296210 KIAA1210Q9ULL0 1709 aa37.31■■■■□ 3.56
TPRA1-201ENST00000296210 PLEKHG1Q9ULL1 1385 aa37.27■■■■□ 3.56
TPRA1-201ENST00000296210 SCAF11Q99590 1463 aaKnown RBP37.27■■■■□ 3.56
TPRA1-201ENST00000296210 TMEM132EQ6IEE7 984 aa37.23■■■■□ 3.55
TPRA1-201ENST00000296210 SETBP1Q9Y6X0 1596 aa37.21■■■■□ 3.55
TPRA1-201ENST00000296210 ALKQ9UM73 1620 aa37.2■■■■□ 3.55
TPRA1-201ENST00000296210 EIF3AQ14152 1382 aaKnown RBP37.15■■■■□ 3.54
TPRA1-201ENST00000296210 ST20-MTHFSA0A0A6YYL1 179 aa37.13■■■■□ 3.53
TPRA1-201ENST00000296210 SLC26A8Q96RN1 970 aa37.13■■■■□ 3.53
TPRA1-201ENST00000296210 PRKRIP1Q9H875 184 aaPredicted RBP37.13■■■■□ 3.53
TPRA1-201ENST00000296210 ADGRB1O14514 1584 aa37.12■■■■□ 3.53
TPRA1-201ENST00000296210 TRAK1Q9UPV9 953 aa37.12■■■■□ 3.53
TPRA1-201ENST00000296210 HSPA2P54652 639 aa37.11■■■■□ 3.53
TPRA1-201ENST00000296210 STK26Q9P289 416 aa37.11■■■■□ 3.53
TPRA1-201ENST00000296210 NCKAP5LQ9HCH0 1330 aa37.11■■■■□ 3.53
TPRA1-201ENST00000296210 IQGAP1P46940 1657 aa37.1■■■■□ 3.53
TPRA1-201ENST00000296210 NRXN3Q9Y4C0 1643 aa37.1■■■■□ 3.53
TPRA1-201ENST00000296210 TBX22Q9Y458 520 aa37.1■■■■□ 3.53
TPRA1-201ENST00000296210 LMTK3Q96Q04 1460 aa37.09■■■■□ 3.53
TPRA1-201ENST00000296210 ADAMTS13Q76LX8 1427 aa37.09■■■■□ 3.53
TPRA1-201ENST00000296210 NPHP4O75161 1426 aaPredicted RBP37.05■■■■□ 3.52
TPRA1-201ENST00000296210 YTHDC2Q9H6S0 1430 aaKnown RBP37.05■■■■□ 3.52
TPRA1-201ENST00000296210 METP08581 1390 aa37.05■■■■□ 3.52
TPRA1-201ENST00000296210 ASXL1Q8IXJ9 1541 aa37.03■■■■□ 3.52
TPRA1-201ENST00000296210 LRPPRCP42704 1394 aaKnown RBP37.01■■■■□ 3.52
TPRA1-201ENST00000296210 DIP2AQ14689 1571 aa37.01■■■■□ 3.51
TPRA1-201ENST00000296210 MED14O60244 1454 aa37.01■■■■□ 3.51
TPRA1-201ENST00000296210 SETD1AO15047 1707 aaKnown RBP36.98■■■■□ 3.51
TPRA1-201ENST00000296210 CENPJQ9HC77 1338 aaPredicted RBP36.98■■■■□ 3.51
TPRA1-201ENST00000296210 SLC24A1O60721 1099 aa36.96■■■■□ 3.51
TPRA1-201ENST00000296210 POGKQ9P215 609 aa36.96■■■■□ 3.51
TPRA1-201ENST00000296210 ABCC11Q96J66 1382 aa36.96■■■■□ 3.51
TPRA1-201ENST00000296210 POLR3GLQ9BT43 218 aa36.93■■■■□ 3.5
TPRA1-201ENST00000296210 PIK3R4Q99570 1358 aa36.91■■■■□ 3.5
TPRA1-201ENST00000296210 TMF1P82094 1093 aa36.9■■■■□ 3.5
TPRA1-201ENST00000296210 PRAM1Q96QH2 718 aa36.9■■■■□ 3.5
TPRA1-201ENST00000296210 TESK2Q96S53 571 aa36.9■■■■□ 3.5
TPRA1-201ENST00000296210 AMOTL2Q9Y2J4 779 aa36.9■■■■□ 3.5
TPRA1-201ENST00000296210 CCDC184Q52MB2 194 aa36.89■■■■□ 3.5
TPRA1-201ENST00000296210 SAFB2Q14151 953 aaKnown RBP eCLIP36.87■■■■□ 3.49
TPRA1-201ENST00000296210 DLC1Q96QB1 1528 aa36.86■■■■□ 3.49
TPRA1-201ENST00000296210 SIRT1Q96EB6 747 aa36.86■■■■□ 3.49
TPRA1-201ENST00000296210 ARHGEF28Q8N1W1 1705 aaKnown RBP36.83■■■■□ 3.49
TPRA1-201ENST00000296210 TECPR2O15040 1411 aa36.83■■■■□ 3.49
TPRA1-201ENST00000296210 PTPRUQ92729 1446 aa36.82■■■■□ 3.49
TPRA1-201ENST00000296210 CDCA8Q53HL2 280 aa36.82■■■■□ 3.48
TPRA1-201ENST00000296210 WAPLQ7Z5K2 1190 aa36.82■■■■□ 3.48
TPRA1-201ENST00000296210 MRS2Q9HD23 443 aa36.82■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms