RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 RIMS2Q9UQ26 1411 aa32.84■■■□□ 2.85
LINC01116-201ENST00000295549 TXNDC2Q86VQ3 553 aa32.84■■■□□ 2.85
LINC01116-201ENST00000295549 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.84■■■□□ 2.85
LINC01116-201ENST00000295549 MYO5BQ9ULV0 1848 aa32.84■■■□□ 2.85
LINC01116-201ENST00000295549 LTKP29376 864 aa32.83■■■□□ 2.85
LINC01116-201ENST00000295549 NCKAP5LQ9HCH0 1330 aa32.79■■■□□ 2.84
LINC01116-201ENST00000295549 SCAF11Q99590 1463 aaKnown RBP32.79■■■□□ 2.84
LINC01116-201ENST00000295549 NEUROD1Q13562 356 aa32.79■■■□□ 2.84
LINC01116-201ENST00000295549 NEXMIFQ5QGS0 1516 aa32.76■■■□□ 2.83
LINC01116-201ENST00000295549 MED14O60244 1454 aa32.74■■■□□ 2.83
LINC01116-201ENST00000295549 VGFO15240 615 aaPredicted RBP32.74■■■□□ 2.83
LINC01116-201ENST00000295549 PPP1R15AO75807 674 aaPredicted RBP32.74■■■□□ 2.83
LINC01116-201ENST00000295549 NUTM2DQ5VT03 806 aaPredicted RBP32.73■■■□□ 2.83
LINC01116-201ENST00000295549 STRCQ7RTU9 1775 aa32.72■■■□□ 2.83
LINC01116-201ENST00000295549 STAC3Q96MF2 364 aa32.71■■■□□ 2.83
LINC01116-201ENST00000295549 DMRT2Q9Y5R5 561 aa32.71■■■□□ 2.83
LINC01116-201ENST00000295549 PLEKHG1Q9ULL1 1385 aa32.69■■■□□ 2.82
LINC01116-201ENST00000295549 NPHP4O75161 1426 aaPredicted RBP32.69■■■□□ 2.82
LINC01116-201ENST00000295549 POLR1AO95602 1720 aaPredicted RBP32.68■■■□□ 2.82
LINC01116-201ENST00000295549 DCAF11Q8TEB1 546 aa32.67■■■□□ 2.82
LINC01116-201ENST00000295549 L3MBTL2Q969R5 705 aa32.66■■■□□ 2.82
LINC01116-201ENST00000295549 PPLO60437 1756 aa32.66■■■□□ 2.82
LINC01116-201ENST00000295549 MYOM2P54296 1465 aa32.62■■■□□ 2.81
LINC01116-201ENST00000295549 ADGRF5Q8IZF2 1346 aa32.62■■■□□ 2.81
LINC01116-201ENST00000295549 IFT172Q9UG01 1749 aa32.62■■■□□ 2.81
LINC01116-201ENST00000295549 TONSLQ96HA7 1378 aa32.61■■■□□ 2.81
LINC01116-201ENST00000295549 KDM2AQ9Y2K7 1162 aa32.6■■■□□ 2.81
LINC01116-201ENST00000295549 BCANQ96GW7 911 aa32.59■■■□□ 2.81
LINC01116-201ENST00000295549 TIMELESSQ9UNS1 1208 aa32.59■■■□□ 2.81
LINC01116-201ENST00000295549 NRXN1Q9ULB1 1477 aa32.58■■■□□ 2.81
LINC01116-201ENST00000295549 IQGAP1P46940 1657 aa32.58■■■□□ 2.81
LINC01116-201ENST00000295549 SETBP1Q9Y6X0 1596 aa32.56■■■□□ 2.8
LINC01116-201ENST00000295549 PIK3C2GO75747 1445 aa32.55■■■□□ 2.8
LINC01116-201ENST00000295549 TBX22Q9Y458 520 aa32.55■■■□□ 2.8
LINC01116-201ENST00000295549 ADAMTS13Q76LX8 1427 aa32.54■■■□□ 2.8
LINC01116-201ENST00000295549 SLC26A8Q96RN1 970 aa32.53■■■□□ 2.8
LINC01116-201ENST00000295549 SENP3Q9H4L4 574 aaPredicted RBP32.53■■■□□ 2.8
LINC01116-201ENST00000295549 NRXN3Q9Y4C0 1643 aa32.5■■■□□ 2.79
LINC01116-201ENST00000295549 C14orf93Q9H972 538 aaKnown RBP32.48■■■□□ 2.79
LINC01116-201ENST00000295549 DIP2AQ14689 1571 aa32.48■■■□□ 2.79
LINC01116-201ENST00000295549 PRAG1Q86YV5 1406 aa32.46■■■□□ 2.79
LINC01116-201ENST00000295549 ALKQ9UM73 1620 aa32.45■■■□□ 2.78
LINC01116-201ENST00000295549 PIK3R4Q99570 1358 aa32.43■■■□□ 2.78
LINC01116-201ENST00000295549 CFAP70Q5T0N1 1121 aa32.42■■■□□ 2.78
LINC01116-201ENST00000295549 METP08581 1390 aa32.4■■■□□ 2.78
LINC01116-201ENST00000295549 KCNA6P17658 529 aa32.36■■■□□ 2.77
LINC01116-201ENST00000295549 ZNF335Q9H4Z2 1342 aaPredicted RBP32.36■■■□□ 2.77
LINC01116-201ENST00000295549 NBPF8Q3BBV2 869 aa32.35■■■□□ 2.77
LINC01116-201ENST00000295549 SETD1AO15047 1707 aaKnown RBP32.35■■■□□ 2.77
LINC01116-201ENST00000295549 LAMC1P11047 1609 aa32.34■■■□□ 2.77
LINC01116-201ENST00000295549 TMEM132EQ6IEE7 984 aa32.32■■■□□ 2.76
LINC01116-201ENST00000295549 PTPRUQ92729 1446 aa32.31■■■□□ 2.76
LINC01116-201ENST00000295549 AMOTL2Q9Y2J4 779 aa32.3■■■□□ 2.76
LINC01116-201ENST00000295549 KIAA1210Q9ULL0 1709 aa32.29■■■□□ 2.76
LINC01116-201ENST00000295549 ASXL1Q8IXJ9 1541 aa32.28■■■□□ 2.76
LINC01116-201ENST00000295549 ADGRB1O14514 1584 aa32.28■■■□□ 2.76
LINC01116-201ENST00000295549 NBPF1Q3BBV0 1214 aa32.27■■■□□ 2.76
LINC01116-201ENST00000295549 CHD2O14647 1828 aaKnown RBP32.26■■■□□ 2.75
LINC01116-201ENST00000295549 NWD1Q149M9 1564 aa32.26■■■□□ 2.75
LINC01116-201ENST00000295549 LRPPRCP42704 1394 aaKnown RBP32.26■■■□□ 2.75
LINC01116-201ENST00000295549 YTHDC2Q9H6S0 1430 aaKnown RBP32.25■■■□□ 2.75
LINC01116-201ENST00000295549 ABCC11Q96J66 1382 aa32.24■■■□□ 2.75
LINC01116-201ENST00000295549 TRPM1Q7Z4N2 1603 aa32.22■■■□□ 2.75
LINC01116-201ENST00000295549 LTBP4Q8N2S1 1624 aa32.22■■■□□ 2.75
LINC01116-201ENST00000295549 NKTRP30414 1462 aaKnown RBP32.22■■■□□ 2.75
LINC01116-201ENST00000295549 CPS1P31327 1500 aa32.21■■■□□ 2.75
LINC01116-201ENST00000295549 ROCK2O75116 1388 aaKnown RBP32.21■■■□□ 2.75
LINC01116-201ENST00000295549 RALGAPBQ86X10 1494 aa32.21■■■□□ 2.75
LINC01116-201ENST00000295549 XRN1Q8IZH2 1706 aaKnown RBP32.2■■■□□ 2.75
LINC01116-201ENST00000295549 GPRASP1Q5JY77 1395 aa32.2■■■□□ 2.75
LINC01116-201ENST00000295549 STRCP1A6NGW2 1772 aa32.2■■■□□ 2.75
LINC01116-201ENST00000295549 TECPR2O15040 1411 aa32.2■■■□□ 2.74
LINC01116-201ENST00000295549 STK26Q9P289 416 aa32.19■■■□□ 2.74
LINC01116-201ENST00000295549 SIRT1Q96EB6 747 aa32.17■■■□□ 2.74
LINC01116-201ENST00000295549 PTCH1Q13635 1447 aa32.17■■■□□ 2.74
LINC01116-201ENST00000295549 PROSER2Q86WR7 435 aaPredicted RBP32.16■■■□□ 2.74
LINC01116-201ENST00000295549 ROBO2Q9HCK4 1378 aa32.15■■■□□ 2.74
LINC01116-201ENST00000295549 TRAK1Q9UPV9 953 aa32.13■■■□□ 2.73
LINC01116-201ENST00000295549 LRRC7Q96NW7 1537 aa32.13■■■□□ 2.73
LINC01116-201ENST00000295549 CARD11Q9BXL7 1154 aa32.12■■■□□ 2.73
LINC01116-201ENST00000295549 FAM135BQ49AJ0 1406 aa32.11■■■□□ 2.73
LINC01116-201ENST00000295549 DLC1Q96QB1 1528 aa32.11■■■□□ 2.73
LINC01116-201ENST00000295549 TMEM94Q12767 1356 aa32.1■■■□□ 2.73
LINC01116-201ENST00000295549 NCOA3Q9Y6Q9 1424 aa32.09■■■□□ 2.73
LINC01116-201ENST00000295549 KNDC1Q76NI1 1749 aa32.09■■■□□ 2.73
LINC01116-201ENST00000295549 WAPLQ7Z5K2 1190 aa32.05■■■□□ 2.72
LINC01116-201ENST00000295549 RBM33Q96EV2 1170 aaKnown RBP32.05■■■□□ 2.72
LINC01116-201ENST00000295549 ZEB1P37275 1124 aaPredicted RBP32.04■■■□□ 2.72
LINC01116-201ENST00000295549 PRAM1Q96QH2 718 aa32.04■■■□□ 2.72
LINC01116-201ENST00000295549 CERKQ8TCT0 537 aa32.02■■■□□ 2.72
LINC01116-201ENST00000295549 POGKQ9P215 609 aa32.02■■■□□ 2.72
LINC01116-201ENST00000295549 PLEKHH1Q9ULM0 1364 aa32.02■■■□□ 2.72
LINC01116-201ENST00000295549 EIF3AQ14152 1382 aaKnown RBP31.99■■■□□ 2.71
LINC01116-201ENST00000295549 IQSEC2Q5JU85 1478 aa31.99■■■□□ 2.71
LINC01116-201ENST00000295549 C19orf44Q9H6X5 657 aa31.98■■■□□ 2.71
LINC01116-201ENST00000295549 C14orf37Q86TY3 774 aa31.97■■■□□ 2.71
LINC01116-201ENST00000295549 ARHGEF28Q8N1W1 1705 aaKnown RBP31.96■■■□□ 2.71
LINC01116-201ENST00000295549 ADGRL3Q9HAR2 1447 aa31.96■■■□□ 2.71
LINC01116-201ENST00000295549 SAFB2Q14151 953 aaKnown RBP eCLIP31.95■■■□□ 2.71
LINC01116-201ENST00000295549 CENPJQ9HC77 1338 aaPredicted RBP31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms