RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 TMEM131LA2VDJ0 1609 aa14.53□□□□□ -0.08
HMHB1-201ENST00000289448 KCNA6P17658 529 aa14.53□□□□□ -0.08
HMHB1-201ENST00000289448 RIMS2Q9UQ26 1411 aa14.52□□□□□ -0.08
HMHB1-201ENST00000289448 CHGAP10645 457 aaKnown RBP14.52□□□□□ -0.09
HMHB1-201ENST00000289448 MYO5BQ9ULV0 1848 aa14.51□□□□□ -0.09
HMHB1-201ENST00000289448 NUTM2DQ5VT03 806 aaPredicted RBP14.51□□□□□ -0.09
HMHB1-201ENST00000289448 RBM33Q96EV2 1170 aaKnown RBP14.51□□□□□ -0.09
HMHB1-201ENST00000289448 NAIPQ13075 1403 aa14.5□□□□□ -0.09
HMHB1-201ENST00000289448 PLEKHG1Q9ULL1 1385 aa14.5□□□□□ -0.09
HMHB1-201ENST00000289448 BCANQ96GW7 911 aa14.5□□□□□ -0.09
HMHB1-201ENST00000289448 TMEM94Q12767 1356 aa14.49□□□□□ -0.09
HMHB1-201ENST00000289448 XIRP1Q702N8 1843 aaKnown RBP14.49□□□□□ -0.09
HMHB1-201ENST00000289448 PPP1R15AO75807 674 aaPredicted RBP14.48□□□□□ -0.09
HMHB1-201ENST00000289448 HDGFP51858 240 aaKnown RBP14.47□□□□□ -0.09
HMHB1-201ENST00000289448 PROSER2Q86WR7 435 aaPredicted RBP14.47□□□□□ -0.09
HMHB1-201ENST00000289448 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.46□□□□□ -0.09
HMHB1-201ENST00000289448 ADAMTS13Q76LX8 1427 aa14.46□□□□□ -0.09
HMHB1-201ENST00000289448 TBX22Q9Y458 520 aa14.45□□□□□ -0.1
HMHB1-201ENST00000289448 NWD1Q149M9 1564 aa14.44□□□□□ -0.1
HMHB1-201ENST00000289448 HFM1A2PYH4 1435 aa14.44□□□□□ -0.1
HMHB1-201ENST00000289448 NKTRP30414 1462 aaKnown RBP14.43□□□□□ -0.1
HMHB1-201ENST00000289448 TRIM52Q96A61 297 aa14.41□□□□□ -0.1
HMHB1-201ENST00000289448 SPHKAPQ2M3C7 1700 aa14.41□□□□□ -0.1
HMHB1-201ENST00000289448 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
HMHB1-201ENST00000289448 MED1Q15648 1581 aaPredicted RBP14.4□□□□□ -0.1
HMHB1-201ENST00000289448 CHD2O14647 1828 aaKnown RBP14.4□□□□□ -0.1
HMHB1-201ENST00000289448 ZNF326Q5BKZ1 582 aaKnown RBP14.39□□□□□ -0.11
HMHB1-201ENST00000289448 PTPRUQ92729 1446 aa14.39□□□□□ -0.11
HMHB1-201ENST00000289448 CLTCL1P53675 1640 aa14.38□□□□□ -0.11
HMHB1-201ENST00000289448 TRPM2O94759 1503 aa14.38□□□□□ -0.11
HMHB1-201ENST00000289448 MSH6P52701 1360 aa14.37□□□□□ -0.11
HMHB1-201ENST00000289448 PIK3R4Q99570 1358 aa14.37□□□□□ -0.11
HMHB1-201ENST00000289448 SOCS7O14512 581 aa14.37□□□□□ -0.11
HMHB1-201ENST00000289448 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
HMHB1-201ENST00000289448 SLAIN2Q9P270 581 aa14.37□□□□□ -0.11
HMHB1-201ENST00000289448 AMOTL2Q9Y2J4 779 aa14.37□□□□□ -0.11
HMHB1-201ENST00000289448 DIP2AQ14689 1571 aa14.37□□□□□ -0.11
HMHB1-201ENST00000289448 NRXN3Q9Y4C0 1643 aa14.35□□□□□ -0.11
HMHB1-201ENST00000289448 FOXD1Q16676 465 aa14.35□□□□□ -0.11
HMHB1-201ENST00000289448 METP08581 1390 aa14.34□□□□□ -0.11
HMHB1-201ENST00000289448 NCOA3Q9Y6Q9 1424 aa14.34□□□□□ -0.11
HMHB1-201ENST00000289448 NEXMIFQ5QGS0 1516 aa14.34□□□□□ -0.11
HMHB1-201ENST00000289448 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
HMHB1-201ENST00000289448 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.11
HMHB1-201ENST00000289448 C14orf37Q86TY3 774 aa14.32□□□□□ -0.12
HMHB1-201ENST00000289448 C19orf44Q9H6X5 657 aa14.31□□□□□ -0.12
HMHB1-201ENST00000289448 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
HMHB1-201ENST00000289448 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
HMHB1-201ENST00000289448 RGS17Q9UGC6 210 aaPredicted RBP14.29□□□□□ -0.12
HMHB1-201ENST00000289448 KIF1BO60333 1816 aa14.28□□□□□ -0.12
HMHB1-201ENST00000289448 ATF3P18847 181 aa14.28□□□□□ -0.12
HMHB1-201ENST00000289448 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
HMHB1-201ENST00000289448 XRN1Q8IZH2 1706 aaKnown RBP14.28□□□□□ -0.12
HMHB1-201ENST00000289448 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.28□□□□□ -0.12
HMHB1-201ENST00000289448 VGFO15240 615 aaPredicted RBP14.27□□□□□ -0.13
HMHB1-201ENST00000289448 RPGRIP1LQ68CZ1 1315 aa14.26□□□□□ -0.13
HMHB1-201ENST00000289448 BRINP3Q76B58 766 aa14.24□□□□□ -0.13
HMHB1-201ENST00000289448 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
HMHB1-201ENST00000289448 ADGRF5Q8IZF2 1346 aa14.23□□□□□ -0.13
HMHB1-201ENST00000289448 RGL3Q3MIN7 710 aa14.23□□□□□ -0.13
HMHB1-201ENST00000289448 PHLPP1O60346 1717 aa14.23□□□□□ -0.13
HMHB1-201ENST00000289448 CCDC144AA2RUR9 1427 aa14.23□□□□□ -0.13
HMHB1-201ENST00000289448 DCCP43146 1447 aa14.23□□□□□ -0.13
HMHB1-201ENST00000289448 SPATA31E1Q6ZUB1 1445 aa14.23□□□□□ -0.13
HMHB1-201ENST00000289448 COL16A1Q07092 1604 aaPredicted RBP14.23□□□□□ -0.13
HMHB1-201ENST00000289448 ROBO2Q9HCK4 1378 aa14.22□□□□□ -0.13
HMHB1-201ENST00000289448 SETD1AO15047 1707 aaKnown RBP14.22□□□□□ -0.13
HMHB1-201ENST00000289448 MST1RQ04912 1400 aa14.22□□□□□ -0.13
HMHB1-201ENST00000289448 JCADQ9P266 1359 aa14.22□□□□□ -0.13
HMHB1-201ENST00000289448 ADGRL3Q9HAR2 1447 aa14.21□□□□□ -0.13
HMHB1-201ENST00000289448 PPLO60437 1756 aa14.21□□□□□ -0.13
HMHB1-201ENST00000289448 AHDC1Q5TGY3 1603 aaPredicted RBP14.2□□□□□ -0.14
HMHB1-201ENST00000289448 POTEAQ6S8J7 498 aa14.2□□□□□ -0.14
HMHB1-201ENST00000289448 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
HMHB1-201ENST00000289448 PTCH1Q13635 1447 aa14.19□□□□□ -0.14
HMHB1-201ENST00000289448 DDX17Q92841 729 aaKnown RBP14.18□□□□□ -0.14
HMHB1-201ENST00000289448 ASXL1Q8IXJ9 1541 aa14.18□□□□□ -0.14
HMHB1-201ENST00000289448 NALCNQ8IZF0 1738 aa14.18□□□□□ -0.14
HMHB1-201ENST00000289448 PRAG1Q86YV5 1406 aa14.17□□□□□ -0.14
HMHB1-201ENST00000289448 LRP6O75581 1613 aa14.16□□□□□ -0.14
HMHB1-201ENST00000289448 ANKRD30BQ9BXX2 1392 aa14.16□□□□□ -0.14
HMHB1-201ENST00000289448 C1orf167Q5SNV9 1468 aa14.15□□□□□ -0.14
HMHB1-201ENST00000289448 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.15
HMHB1-201ENST00000289448 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.15
HMHB1-201ENST00000289448 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
HMHB1-201ENST00000289448 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
HMHB1-201ENST00000289448 STK26Q9P289 416 aa14.14□□□□□ -0.15
HMHB1-201ENST00000289448 WAPLQ7Z5K2 1190 aa14.13□□□□□ -0.15
HMHB1-201ENST00000289448 PIK3C2GO75747 1445 aa14.13□□□□□ -0.15
HMHB1-201ENST00000289448 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
HMHB1-201ENST00000289448 LRPPRCP42704 1394 aaKnown RBP14.12□□□□□ -0.15
HMHB1-201ENST00000289448 NUTM2BA6NNL0 878 aaPredicted RBP14.11□□□□□ -0.15
HMHB1-201ENST00000289448 NUTM2EB1AL46 878 aaPredicted RBP14.11□□□□□ -0.15
HMHB1-201ENST00000289448 NUTM2AQ8IVF1 878 aaPredicted RBP14.11□□□□□ -0.15
HMHB1-201ENST00000289448 NHSL1Q5SYE7 1610 aa14.11□□□□□ -0.15
HMHB1-201ENST00000289448 SHPRHQ149N8 1683 aa14.1□□□□□ -0.15
HMHB1-201ENST00000289448 ABCC11Q96J66 1382 aa14.1□□□□□ -0.15
HMHB1-201ENST00000289448 PLEKHH1Q9ULM0 1364 aa14.1□□□□□ -0.15
HMHB1-201ENST00000289448 TECPR2O15040 1411 aa14.1□□□□□ -0.15
HMHB1-201ENST00000289448 LRRC59Q96AG4 307 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms