RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
NCK1-201ENST00000288986 RIMS2Q9UQ26 1411 aa22.32■■□□□ 1.16
NCK1-201ENST00000288986 ARHGAP23Q9P227 1491 aa22.32■■□□□ 1.16
NCK1-201ENST00000288986 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.31■■□□□ 1.16
NCK1-201ENST00000288986 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
NCK1-201ENST00000288986 DMRT2Q9Y5R5 561 aa22.31■■□□□ 1.16
NCK1-201ENST00000288986 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
NCK1-201ENST00000288986 NEUROD1Q13562 356 aa22.29■■□□□ 1.16
NCK1-201ENST00000288986 STRCQ7RTU9 1775 aa22.29■■□□□ 1.16
NCK1-201ENST00000288986 SCAF11Q99590 1463 aaKnown RBP22.29■■□□□ 1.16
NCK1-201ENST00000288986 BCANQ96GW7 911 aa22.29■■□□□ 1.16
NCK1-201ENST00000288986 SPATA31E1Q6ZUB1 1445 aa22.28■■□□□ 1.16
NCK1-201ENST00000288986 ZFYVE9O95405 1425 aa22.28■■□□□ 1.16
NCK1-201ENST00000288986 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
NCK1-201ENST00000288986 VGFO15240 615 aaPredicted RBP22.24■■□□□ 1.15
NCK1-201ENST00000288986 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
NCK1-201ENST00000288986 POLR1AO95602 1720 aaPredicted RBP22.23■■□□□ 1.15
NCK1-201ENST00000288986 MED14O60244 1454 aa22.23■■□□□ 1.15
NCK1-201ENST00000288986 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
NCK1-201ENST00000288986 NEXMIFQ5QGS0 1516 aa22.21■■□□□ 1.15
NCK1-201ENST00000288986 DCAF11Q8TEB1 546 aa22.21■■□□□ 1.15
NCK1-201ENST00000288986 PLEKHG1Q9ULL1 1385 aa22.2■■□□□ 1.14
NCK1-201ENST00000288986 SLC26A8Q96RN1 970 aa22.19■■□□□ 1.14
NCK1-201ENST00000288986 KDM2AQ9Y2K7 1162 aa22.19■■□□□ 1.14
NCK1-201ENST00000288986 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
NCK1-201ENST00000288986 IQGAP1P46940 1657 aa22.16■■□□□ 1.14
NCK1-201ENST00000288986 PPLO60437 1756 aa22.14■■□□□ 1.13
NCK1-201ENST00000288986 L3MBTL2Q969R5 705 aa22.14■■□□□ 1.13
NCK1-201ENST00000288986 STAC3Q96MF2 364 aa22.12■■□□□ 1.13
NCK1-201ENST00000288986 TBX22Q9Y458 520 aa22.11■■□□□ 1.13
NCK1-201ENST00000288986 TONSLQ96HA7 1378 aa22.1■■□□□ 1.13
NCK1-201ENST00000288986 ADAMTS13Q76LX8 1427 aa22.09■■□□□ 1.13
NCK1-201ENST00000288986 ZNF335Q9H4Z2 1342 aaPredicted RBP22.09■■□□□ 1.13
NCK1-201ENST00000288986 IFT172Q9UG01 1749 aa22.09■■□□□ 1.13
NCK1-201ENST00000288986 MYOM2P54296 1465 aa22.07■■□□□ 1.12
NCK1-201ENST00000288986 SETBP1Q9Y6X0 1596 aa22.06■■□□□ 1.12
NCK1-201ENST00000288986 PIK3C2GO75747 1445 aa22.05■■□□□ 1.12
NCK1-201ENST00000288986 CFAP70Q5T0N1 1121 aa22.04■■□□□ 1.12
NCK1-201ENST00000288986 TIMELESSQ9UNS1 1208 aa22.04■■□□□ 1.12
NCK1-201ENST00000288986 NRXN3Q9Y4C0 1643 aa22.03■■□□□ 1.12
NCK1-201ENST00000288986 NRXN1Q9ULB1 1477 aa22.03■■□□□ 1.12
NCK1-201ENST00000288986 METP08581 1390 aa22.02■■□□□ 1.12
NCK1-201ENST00000288986 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
NCK1-201ENST00000288986 KCNA6P17658 529 aa22.02■■□□□ 1.11
NCK1-201ENST00000288986 DIP2AQ14689 1571 aa22.02■■□□□ 1.11
NCK1-201ENST00000288986 ALKQ9UM73 1620 aa22.01■■□□□ 1.11
NCK1-201ENST00000288986 TMEM132EQ6IEE7 984 aa22■■□□□ 1.11
NCK1-201ENST00000288986 AMOTL2Q9Y2J4 779 aa22■■□□□ 1.11
NCK1-201ENST00000288986 PIK3R4Q99570 1358 aa21.99■■□□□ 1.11
NCK1-201ENST00000288986 PRAG1Q86YV5 1406 aa21.97■■□□□ 1.11
NCK1-201ENST00000288986 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
NCK1-201ENST00000288986 STK26Q9P289 416 aa21.95■■□□□ 1.1
NCK1-201ENST00000288986 PROSER2Q86WR7 435 aaPredicted RBP21.94■■□□□ 1.1
NCK1-201ENST00000288986 LTBP4Q8N2S1 1624 aa21.94■■□□□ 1.1
NCK1-201ENST00000288986 CHD2O14647 1828 aaKnown RBP21.92■■□□□ 1.1
NCK1-201ENST00000288986 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
NCK1-201ENST00000288986 RBM33Q96EV2 1170 aaKnown RBP21.92■■□□□ 1.1
NCK1-201ENST00000288986 SETD1AO15047 1707 aaKnown RBP21.92■■□□□ 1.1
NCK1-201ENST00000288986 STRCP1A6NGW2 1772 aa21.91■■□□□ 1.1
NCK1-201ENST00000288986 CPS1P31327 1500 aa21.91■■□□□ 1.1
NCK1-201ENST00000288986 NBPF1Q3BBV0 1214 aa21.91■■□□□ 1.1
NCK1-201ENST00000288986 LAMC1P11047 1609 aa21.9■■□□□ 1.1
NCK1-201ENST00000288986 CERKQ8TCT0 537 aa21.9■■□□□ 1.1
NCK1-201ENST00000288986 YTHDC2Q9H6S0 1430 aaKnown RBP21.89■■□□□ 1.09
NCK1-201ENST00000288986 NWD1Q149M9 1564 aa21.88■■□□□ 1.09
NCK1-201ENST00000288986 LRPPRCP42704 1394 aaKnown RBP21.88■■□□□ 1.09
NCK1-201ENST00000288986 NKTRP30414 1462 aaKnown RBP21.88■■□□□ 1.09
NCK1-201ENST00000288986 ASXL1Q8IXJ9 1541 aa21.87■■□□□ 1.09
NCK1-201ENST00000288986 LRRC7Q96NW7 1537 aa21.87■■□□□ 1.09
NCK1-201ENST00000288986 TMEM94Q12767 1356 aa21.86■■□□□ 1.09
NCK1-201ENST00000288986 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
NCK1-201ENST00000288986 ROCK2O75116 1388 aaKnown RBP21.85■■□□□ 1.09
NCK1-201ENST00000288986 ABCC11Q96J66 1382 aa21.85■■□□□ 1.09
NCK1-201ENST00000288986 C14orf37Q86TY3 774 aa21.85■■□□□ 1.09
NCK1-201ENST00000288986 ADGRB1O14514 1584 aa21.85■■□□□ 1.09
NCK1-201ENST00000288986 ROBO2Q9HCK4 1378 aa21.85■■□□□ 1.09
NCK1-201ENST00000288986 XRN1Q8IZH2 1706 aaKnown RBP21.83■■□□□ 1.09
NCK1-201ENST00000288986 KIAA1210Q9ULL0 1709 aa21.82■■□□□ 1.08
NCK1-201ENST00000288986 WAPLQ7Z5K2 1190 aa21.82■■□□□ 1.08
NCK1-201ENST00000288986 PTCH1Q13635 1447 aa21.81■■□□□ 1.08
NCK1-201ENST00000288986 TRPM1Q7Z4N2 1603 aa21.81■■□□□ 1.08
NCK1-201ENST00000288986 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
NCK1-201ENST00000288986 POGKQ9P215 609 aa21.8■■□□□ 1.08
NCK1-201ENST00000288986 TECPR2O15040 1411 aa21.8■■□□□ 1.08
NCK1-201ENST00000288986 PRAM1Q96QH2 718 aa21.8■■□□□ 1.08
NCK1-201ENST00000288986 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.082e-6■■□□□ 12.2
NCK1-201ENST00000288986 SIRT1Q96EB6 747 aa21.78■■□□□ 1.08
NCK1-201ENST00000288986 NCOA3Q9Y6Q9 1424 aa21.77■■□□□ 1.08
NCK1-201ENST00000288986 PLEKHH1Q9ULM0 1364 aa21.77■■□□□ 1.07
NCK1-201ENST00000288986 C19orf44Q9H6X5 657 aa21.76■■□□□ 1.07
NCK1-201ENST00000288986 RALGAPBQ86X10 1494 aa21.76■■□□□ 1.07
NCK1-201ENST00000288986 MSH6P52701 1360 aa21.76■■□□□ 1.07
NCK1-201ENST00000288986 ZNF316A6NFI3 1004 aaPredicted RBP21.76■■□□□ 1.07
NCK1-201ENST00000288986 FAM135BQ49AJ0 1406 aa21.76■■□□□ 1.07
NCK1-201ENST00000288986 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
NCK1-201ENST00000288986 KNDC1Q76NI1 1749 aa21.74■■□□□ 1.07
NCK1-201ENST00000288986 IQSEC2Q5JU85 1478 aa21.74■■□□□ 1.07
NCK1-201ENST00000288986 XIRP1Q702N8 1843 aaKnown RBP21.73■■□□□ 1.07
NCK1-201ENST00000288986 DLC1Q96QB1 1528 aa21.73■■□□□ 1.07
NCK1-201ENST00000288986 UBAP1LF5GYI3 381 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms