RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 SYTL4Q96C24 671 aaPredicted RBP13.56□□□□□ -0.24
PREX2-201ENST00000288368 TRIM29Q14134 588 aa13.56□□□□□ -0.24
PREX2-201ENST00000288368 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
PREX2-201ENST00000288368 BECN2A8MW95 431 aa13.55□□□□□ -0.24
PREX2-201ENST00000288368 NEXNQ0ZGT2 675 aa13.55□□□□□ -0.24
PREX2-201ENST00000288368 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
PREX2-201ENST00000288368 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
PREX2-201ENST00000288368 BCL2L13Q9BXK5 485 aa13.55□□□□□ -0.24
PREX2-201ENST00000288368 DHX16O60231 1041 aaKnown RBP13.54□□□□□ -0.24
PREX2-201ENST00000288368 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
PREX2-201ENST00000288368 FOSBP53539 338 aa13.54□□□□□ -0.24
PREX2-201ENST00000288368 HOOK1Q9UJC3 728 aaKnown RBP13.54□□□□□ -0.24
PREX2-201ENST00000288368 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
PREX2-201ENST00000288368 PDE3BQ13370 1112 aa13.53□□□□□ -0.24
PREX2-201ENST00000288368 CCDC43Q96MW1 224 aaKnown RBP13.53□□□□□ -0.24
PREX2-201ENST00000288368 ANKRD20A12PQ8NF67 263 aa13.53□□□□□ -0.24
PREX2-201ENST00000288368 NFXL1Q6ZNB6 911 aa13.53□□□□□ -0.24
PREX2-201ENST00000288368 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
PREX2-201ENST00000288368 PANK3Q9H999 370 aa13.53□□□□□ -0.24
PREX2-201ENST00000288368 CWC22Q9HCG8 908 aaKnown RBP13.53□□□□□ -0.24
PREX2-201ENST00000288368 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.24
PREX2-201ENST00000288368 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.25
PREX2-201ENST00000288368 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
PREX2-201ENST00000288368 RUFY2Q8WXA3 655 aa13.52□□□□□ -0.25
PREX2-201ENST00000288368 PLIN1O60240 522 aa13.51□□□□□ -0.25
PREX2-201ENST00000288368 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
PREX2-201ENST00000288368 CPLX1O14810 134 aa13.51□□□□□ -0.25
PREX2-201ENST00000288368 REC8O95072 547 aa13.51□□□□□ -0.25
PREX2-201ENST00000288368 IPO7O95373 1038 aaKnown RBP13.51□□□□□ -0.25
PREX2-201ENST00000288368 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
PREX2-201ENST00000288368 GPS2Q13227 327 aa13.51□□□□□ -0.25
PREX2-201ENST00000288368 IFIT2P09913 472 aaKnown RBP13.51□□□□□ -0.25
PREX2-201ENST00000288368 FAM161AQ3B820 660 aa13.5□□□□□ -0.25
PREX2-201ENST00000288368 ZKSCAN2Q63HK3 967 aa13.5□□□□□ -0.25
PREX2-201ENST00000288368 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
PREX2-201ENST00000288368 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
PREX2-201ENST00000288368 TEFQ10587 303 aa13.5□□□□□ -0.25
PREX2-201ENST00000288368 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
PREX2-201ENST00000288368 E9PSI1 815 aa13.49□□□□□ -0.25
PREX2-201ENST00000288368 KIF21BO75037 1637 aa13.48□□□□□ -0.25
PREX2-201ENST00000288368 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
PREX2-201ENST00000288368 ELL2O00472 640 aaPredicted RBP13.48□□□□□ -0.25
PREX2-201ENST00000288368 ZKSCAN1P17029 563 aaPredicted RBP13.48□□□□□ -0.25
PREX2-201ENST00000288368 NAP1L1P55209 391 aaKnown RBP13.48□□□□□ -0.25
PREX2-201ENST00000288368 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.25
PREX2-201ENST00000288368 ZNF771Q7L3S4 317 aaPredicted RBP13.48□□□□□ -0.25
PREX2-201ENST00000288368 RRP1P56182 461 aaKnown RBP13.47□□□□□ -0.25
PREX2-201ENST00000288368 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
PREX2-201ENST00000288368 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
PREX2-201ENST00000288368 EPS15P42566 896 aa13.47□□□□□ -0.25
PREX2-201ENST00000288368 BICD2Q8TD16 824 aa13.47□□□□□ -0.25
PREX2-201ENST00000288368 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
PREX2-201ENST00000288368 ERICH2A1L162 156 aa13.46□□□□□ -0.25
PREX2-201ENST00000288368 NINLQ9Y2I6 1382 aa13.46□□□□□ -0.25
PREX2-201ENST00000288368 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.25
PREX2-201ENST00000288368 ZBED9Q6R2W3 1325 aa13.46□□□□□ -0.26
PREX2-201ENST00000288368 TRDNQ13061 729 aa13.46□□□□□ -0.26
PREX2-201ENST00000288368 HOMER1Q86YM7 354 aa13.46□□□□□ -0.26
PREX2-201ENST00000288368 CRBNQ96SW2 442 aa13.46□□□□□ -0.26
PREX2-201ENST00000288368 PSME1Q06323 249 aa13.45□□□□□ -0.26
PREX2-201ENST00000288368 CT47A1Q5JQC4 288 aaPredicted RBP13.45□□□□□ -0.26
PREX2-201ENST00000288368 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
PREX2-201ENST00000288368 ST20-MTHFSA0A0A6YYL1 179 aa13.45□□□□□ -0.26
PREX2-201ENST00000288368 FYB1O15117 783 aa13.45□□□□□ -0.26
PREX2-201ENST00000288368 SLC4A3P48751 1232 aa13.44□□□□□ -0.26
PREX2-201ENST00000288368 RNF20Q5VTR2 975 aa13.44□□□□□ -0.26
PREX2-201ENST00000288368 CPLX2Q6PUV4 134 aaKnown RBP13.44□□□□□ -0.26
PREX2-201ENST00000288368 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
PREX2-201ENST00000288368 RBM33Q96EV2 1170 aaKnown RBP13.44□□□□□ -0.26
PREX2-201ENST00000288368 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
PREX2-201ENST00000288368 G3BP1Q13283 466 aaKnown RBP eCLIP13.44□□□□□ -0.26
PREX2-201ENST00000288368 VPS37CA5D8V6 355 aaPredicted RBP13.43□□□□□ -0.26
PREX2-201ENST00000288368 RUFY1Q96T51 708 aa13.43□□□□□ -0.26
PREX2-201ENST00000288368 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
PREX2-201ENST00000288368 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
PREX2-201ENST00000288368 AK7Q96M32 723 aa13.43□□□□□ -0.26
PREX2-201ENST00000288368 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
PREX2-201ENST00000288368 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
PREX2-201ENST00000288368 SETD1BQ9UPS6 1966 aaKnown RBP13.42□□□□□ -0.26
PREX2-201ENST00000288368 ODF2Q5BJF6 829 aa13.42□□□□□ -0.26
PREX2-201ENST00000288368 COG6Q9Y2V7 657 aa13.42□□□□□ -0.26
PREX2-201ENST00000288368 RRP12Q5JTH9 1297 aaKnown RBP13.41□□□□□ -0.26
PREX2-201ENST00000288368 PDE4AP27815 886 aa13.41□□□□□ -0.26
PREX2-201ENST00000288368 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
PREX2-201ENST00000288368 FKBP5Q13451 457 aaPredicted RBP13.4□□□□□ -0.26
PREX2-201ENST00000288368 SAFBQ15424 915 aaKnown RBP eCLIP13.4□□□□□ -0.26
PREX2-201ENST00000288368 ERC2O15083 957 aa13.4□□□□□ -0.26
PREX2-201ENST00000288368 RIPK4P57078 832 aa13.39□□□□□ -0.27
PREX2-201ENST00000288368 CAGE1Q8TC20 777 aa13.39□□□□□ -0.27
PREX2-201ENST00000288368 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
PREX2-201ENST00000288368 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
PREX2-201ENST00000288368 EXOC6Q8TAG9 804 aa13.39□□□□□ -0.27
PREX2-201ENST00000288368 CCDC27Q2M243 656 aa13.39□□□□□ -0.27
PREX2-201ENST00000288368 GSE1Q14687 1217 aa13.39□□□□□ -0.27
PREX2-201ENST00000288368 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
PREX2-201ENST00000288368 DIAPH1O60610 1272 aaKnown RBP13.38□□□□□ -0.27
PREX2-201ENST00000288368 DZIP1LQ8IYY4 767 aaKnown RBP13.38□□□□□ -0.27
PREX2-201ENST00000288368 NAT10Q9H0A0 1025 aaKnown RBP13.38□□□□□ -0.27
PREX2-201ENST00000288368 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
PREX2-201ENST00000288368 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms