RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 KDM2AQ9Y2K7 1162 aa10.24□□□□□ -0.77
CACNA1D-201ENST00000288139 NUP155O75694 1391 aa10.24□□□□□ -0.77
CACNA1D-201ENST00000288139 CC2D2AQ9P2K1 1620 aa10.24□□□□□ -0.77
CACNA1D-201ENST00000288139 TERF2IPQ9NYB0 399 aa10.23□□□□□ -0.77
CACNA1D-201ENST00000288139 LRRFIP1Q32MZ4 808 aaKnown RBP10.23□□□□□ -0.77
CACNA1D-201ENST00000288139 CCDC39Q9UFE4 941 aa10.23□□□□□ -0.77
CACNA1D-201ENST00000288139 SIN3AQ96ST3 1273 aa10.23□□□□□ -0.77
CACNA1D-201ENST00000288139 CADPSQ9ULU8 1353 aa10.22□□□□□ -0.77
CACNA1D-201ENST00000288139 CCDC191Q8NCU4 936 aa10.22□□□□□ -0.77
CACNA1D-201ENST00000288139 MORC1Q86VD1 984 aa10.22□□□□□ -0.77
CACNA1D-201ENST00000288139 TPD52L1Q16890 204 aaPredicted RBP10.22□□□□□ -0.77
CACNA1D-201ENST00000288139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
CACNA1D-201ENST00000288139 PDE3AQ14432 1141 aa10.22□□□□□ -0.77
CACNA1D-201ENST00000288139 MYO6Q9UM54 1294 aa10.22□□□□□ -0.77
CACNA1D-201ENST00000288139 IPO7O95373 1038 aaKnown RBP10.21□□□□□ -0.77
CACNA1D-201ENST00000288139 KIF2AO00139 706 aaPredicted RBP10.21□□□□□ -0.77
CACNA1D-201ENST00000288139 CCDC173Q0VFZ6 552 aa10.21□□□□□ -0.77
CACNA1D-201ENST00000288139 DCTN1Q14203 1278 aa10.21□□□□□ -0.78
CACNA1D-201ENST00000288139 CCDC43Q96MW1 224 aaKnown RBP10.21□□□□□ -0.78
CACNA1D-201ENST00000288139 SPAG9O60271 1321 aaKnown RBP10.21□□□□□ -0.78
CACNA1D-201ENST00000288139 PRXQ9BXM0 1461 aa10.21□□□□□ -0.78
CACNA1D-201ENST00000288139 AMOTL1Q8IY63 956 aa10.21□□□□□ -0.78
CACNA1D-201ENST00000288139 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
CACNA1D-201ENST00000288139 FRAT1Q92837 279 aaPredicted RBP10.2□□□□□ -0.78
CACNA1D-201ENST00000288139 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
CACNA1D-201ENST00000288139 GORABQ5T7V8 394 aa10.2□□□□□ -0.78
CACNA1D-201ENST00000288139 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
CACNA1D-201ENST00000288139 PDCP20941 246 aa10.2□□□□□ -0.78
CACNA1D-201ENST00000288139 PATL2C9JE40 543 aaKnown RBP10.19□□□□□ -0.78
CACNA1D-201ENST00000288139 INSRP06213 1382 aa10.19□□□□□ -0.78
CACNA1D-201ENST00000288139 CAVIN2O95810 425 aa10.19□□□□□ -0.78
CACNA1D-201ENST00000288139 CT47A1Q5JQC4 288 aaPredicted RBP10.19□□□□□ -0.78
CACNA1D-201ENST00000288139 ZKSCAN2Q63HK3 967 aa10.19□□□□□ -0.78
CACNA1D-201ENST00000288139 PKD2Q13563 968 aa10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 DAPK1P53355 1430 aa10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 TAF7LQ5H9L4 462 aa10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 CAGE1Q8TC20 777 aa10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 L3MBTL2Q969R5 705 aa10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 FEZ1Q99689 392 aa10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 PKNOX2Q96KN3 472 aa10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 SLKQ9H2G2 1235 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 HDGFL2Q7Z4V5 671 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-201ENST00000288139 ANKRD20A12PQ8NF67 263 aa10.17□□□□□ -0.78
CACNA1D-201ENST00000288139 HOOK1Q9UJC3 728 aaKnown RBP10.17□□□□□ -0.78
CACNA1D-201ENST00000288139 CCDC141Q6ZP82 1450 aa10.17□□□□□ -0.78
CACNA1D-201ENST00000288139 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
CACNA1D-201ENST00000288139 PES1O00541 588 aaKnown RBP10.17□□□□□ -0.78
CACNA1D-201ENST00000288139 ITSN2Q9NZM3 1697 aa10.17□□□□□ -0.78
CACNA1D-201ENST00000288139 ATAD2Q6PL18 1390 aa10.17□□□□□ -0.78
CACNA1D-201ENST00000288139 NOL10Q9BSC4 688 aaKnown RBP10.17□□□□□ -0.78
CACNA1D-201ENST00000288139 BIVM-ERCC5R4GMW8 1640 aa10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 CREBRFQ8IUR6 639 aa10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 ANKRD18AQ8IVF6 992 aa10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 NAT10Q9H0A0 1025 aaKnown RBP10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 RUFY2Q8WXA3 655 aa10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 RNF20Q5VTR2 975 aa10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 DDX49Q9Y6V7 483 aaKnown RBP10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 GOLGA4Q13439 2230 aaKnown RBP10.16□□□□□ -0.78
CACNA1D-201ENST00000288139 CCDC47Q96A33 483 aaKnown RBP10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 RTN4Q9NQC3 1192 aaKnown RBP10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 RTF1Q92541 710 aaKnown RBP10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 RABEP1Q15276 862 aa10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 PLEKHH1Q9ULM0 1364 aa10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 CCDC112Q8NEF3 446 aa10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 AK7Q96M32 723 aa10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 ZMYM3Q14202 1370 aa10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 NCAPD3P42695 1498 aa10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 FRAT2O75474 233 aaPredicted RBP10.15□□□□□ -0.78
CACNA1D-201ENST00000288139 USP8P40818 1118 aa10.15□□□□□ -0.79
CACNA1D-201ENST00000288139 NASPP49321 788 aaPredicted RBP10.15□□□□□ -0.79
CACNA1D-201ENST00000288139 CCDC97Q96F63 343 aaPredicted RBP10.14□□□□□ -0.79
CACNA1D-201ENST00000288139 STK31Q9BXU1 1019 aa10.14□□□□□ -0.79
CACNA1D-201ENST00000288139 RUFY1Q96T51 708 aa10.14□□□□□ -0.79
CACNA1D-201ENST00000288139 HS1BP3Q53T59 392 aa10.14□□□□□ -0.79
CACNA1D-201ENST00000288139 AKAP17AQ02040 695 aaKnown RBP10.14□□□□□ -0.79
CACNA1D-201ENST00000288139 KANK4Q5T7N3 995 aaPredicted RBP10.14□□□□□ -0.79
CACNA1D-201ENST00000288139 ERCC4Q92889 916 aaPredicted RBP10.14□□□□□ -0.79
CACNA1D-201ENST00000288139 VSIG10Q8N0Z9 540 aa10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 GOLGA6L19H0YKK7 550 aa10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 NFKBIBQ15653 356 aa10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 API5Q9BZZ5 524 aaKnown RBP10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 CFAP43Q8NDM7 1665 aa10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 NCOA2Q15596 1464 aa10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 ITPRIPQ8IWB1 547 aa10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 KLHL34Q8N239 644 aa10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 EFCAB2Q5VUJ9 269 aa10.13□□□□□ -0.79
CACNA1D-201ENST00000288139 TRIM21P19474 475 aaKnown RBP10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 EIF2AK4Q9P2K8 1649 aaKnown RBP10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 SMC4Q9NTJ3 1288 aa10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 POGKQ9P215 609 aa10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 GTF2E1P29083 439 aaPredicted RBP10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 BACH2Q9BYV9 841 aa10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 HSP90AB4PQ58FF6 505 aa10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 HIRIP3Q9BW71 556 aaPredicted RBP10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 GRIPAP1Q4V328 841 aa10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 AEBP2Q6ZN18 517 aaPredicted RBP10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 CLUAP1Q96AJ1 413 aa10.12□□□□□ -0.79
CACNA1D-201ENST00000288139 FHOD3Q2V2M9 1422 aa10.11□□□□□ -0.79
CACNA1D-201ENST00000288139 HSP90B2PQ58FF3 399 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms