RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PPLO60437 1756 aa31.38■■■□□ 2.61
PDLIM3-203ENST00000284771 NUTM2DQ5VT03 806 aaPredicted RBP31.38■■■□□ 2.61
PDLIM3-203ENST00000284771 THEMISQ8N1K5 641 aaPredicted RBP31.36■■■□□ 2.61
PDLIM3-203ENST00000284771 TMEM2Q9UHN6 1383 aa31.36■■■□□ 2.61
PDLIM3-203ENST00000284771 ZFYVE9O95405 1425 aa31.35■■■□□ 2.61
PDLIM3-203ENST00000284771 NBPF8Q3BBV2 869 aa31.34■■■□□ 2.61
PDLIM3-203ENST00000284771 RIMS2Q9UQ26 1411 aa31.33■■■□□ 2.61
PDLIM3-203ENST00000284771 ADGRF5Q8IZF2 1346 aa31.33■■■□□ 2.61
PDLIM3-203ENST00000284771 ARHGAP23Q9P227 1491 aa31.31■■■□□ 2.6
PDLIM3-203ENST00000284771 SLIT1O75093 1534 aa31.3■■■□□ 2.6
PDLIM3-203ENST00000284771 MYOM2P54296 1465 aa31.29■■■□□ 2.6
PDLIM3-203ENST00000284771 LTKP29376 864 aa31.29■■■□□ 2.6
PDLIM3-203ENST00000284771 STAC3Q96MF2 364 aa31.29■■■□□ 2.6
PDLIM3-203ENST00000284771 VGFO15240 615 aaPredicted RBP31.28■■■□□ 2.6
PDLIM3-203ENST00000284771 PRAG1Q86YV5 1406 aa31.27■■■□□ 2.6
PDLIM3-203ENST00000284771 LMTK3Q96Q04 1460 aa31.27■■■□□ 2.6
PDLIM3-203ENST00000284771 NRXN1Q9ULB1 1477 aa31.27■■■□□ 2.6
PDLIM3-203ENST00000284771 TXNDC2Q86VQ3 553 aa31.23■■■□□ 2.59
PDLIM3-203ENST00000284771 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.22■■■□□ 2.59
PDLIM3-203ENST00000284771 SENP3Q9H4L4 574 aaPredicted RBP31.22■■■□□ 2.59
PDLIM3-203ENST00000284771 HSPA2P54652 639 aa31.21■■■□□ 2.59
PDLIM3-203ENST00000284771 PIK3C2GO75747 1445 aa31.21■■■□□ 2.59
PDLIM3-203ENST00000284771 HDGFP51858 240 aaKnown RBP31.2■■■□□ 2.59
PDLIM3-203ENST00000284771 EID1Q9Y6B2 187 aa31.19■■■□□ 2.58
PDLIM3-203ENST00000284771 ANKLE2Q86XL3 938 aa31.16■■■□□ 2.58
PDLIM3-203ENST00000284771 SCAF11Q99590 1463 aaKnown RBP31.16■■■□□ 2.58
PDLIM3-203ENST00000284771 CFAP70Q5T0N1 1121 aa31.15■■■□□ 2.58
PDLIM3-203ENST00000284771 NBPF1Q3BBV0 1214 aa31.14■■■□□ 2.58
PDLIM3-203ENST00000284771 TRPM1Q7Z4N2 1603 aa31.13■■■□□ 2.57
PDLIM3-203ENST00000284771 C14orf93Q9H972 538 aaKnown RBP31.13■■■□□ 2.57
PDLIM3-203ENST00000284771 NRXN3Q9Y4C0 1643 aa31.12■■■□□ 2.57
PDLIM3-203ENST00000284771 PLEKHG1Q9ULL1 1385 aa31.11■■■□□ 2.57
PDLIM3-203ENST00000284771 NCKAP5LQ9HCH0 1330 aa31.1■■■□□ 2.57
PDLIM3-203ENST00000284771 RALGAPBQ86X10 1494 aa31.08■■■□□ 2.57
PDLIM3-203ENST00000284771 SETBP1Q9Y6X0 1596 aa31.08■■■□□ 2.57
PDLIM3-203ENST00000284771 IQGAP1P46940 1657 aa31.07■■■□□ 2.56
PDLIM3-203ENST00000284771 ADAMTS13Q76LX8 1427 aa31.06■■■□□ 2.56
PDLIM3-203ENST00000284771 ALKQ9UM73 1620 aa31.06■■■□□ 2.56
PDLIM3-203ENST00000284771 KIAA1210Q9ULL0 1709 aa31.06■■■□□ 2.56
PDLIM3-203ENST00000284771 POLR1AO95602 1720 aaPredicted RBP31.06■■■□□ 2.56
PDLIM3-203ENST00000284771 MED14O60244 1454 aa31.04■■■□□ 2.56
PDLIM3-203ENST00000284771 BCANQ96GW7 911 aa31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 SETD1AO15047 1707 aaKnown RBP31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 ROCK2O75116 1388 aaKnown RBP31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 TMEM132EQ6IEE7 984 aa31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 SLC26A8Q96RN1 970 aa31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 GPRASP1Q5JY77 1395 aa31.01■■■□□ 2.56
PDLIM3-203ENST00000284771 STRCQ7RTU9 1775 aa31.01■■■□□ 2.56
PDLIM3-203ENST00000284771 ADGRB1O14514 1584 aa31.01■■■□□ 2.55
PDLIM3-203ENST00000284771 NPHP4O75161 1426 aaPredicted RBP31■■■□□ 2.55
PDLIM3-203ENST00000284771 ASXL1Q8IXJ9 1541 aa30.99■■■□□ 2.55
PDLIM3-203ENST00000284771 LAMC1P11047 1609 aa30.99■■■□□ 2.55
PDLIM3-203ENST00000284771 CARD11Q9BXL7 1154 aa30.98■■■□□ 2.55
PDLIM3-203ENST00000284771 METP08581 1390 aa30.98■■■□□ 2.55
PDLIM3-203ENST00000284771 TBX22Q9Y458 520 aa30.96■■■□□ 2.55
PDLIM3-203ENST00000284771 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.55
PDLIM3-203ENST00000284771 DIP2AQ14689 1571 aa30.89■■■□□ 2.54
PDLIM3-203ENST00000284771 YTHDC2Q9H6S0 1430 aaKnown RBP30.87■■■□□ 2.53
PDLIM3-203ENST00000284771 PTPRUQ92729 1446 aa30.87■■■□□ 2.53
PDLIM3-203ENST00000284771 USP47Q96K76 1375 aa30.85■■■□□ 2.53
PDLIM3-203ENST00000284771 STK26Q9P289 416 aa30.85■■■□□ 2.53
PDLIM3-203ENST00000284771 TRAK1Q9UPV9 953 aa30.85■■■□□ 2.53
PDLIM3-203ENST00000284771 HIRIP3Q9BW71 556 aaPredicted RBP30.84■■■□□ 2.53
PDLIM3-203ENST00000284771 LRPPRCP42704 1394 aaKnown RBP30.82■■■□□ 2.52
PDLIM3-203ENST00000284771 HSPA5P11021 654 aaKnown RBP30.82■■■□□ 2.52
PDLIM3-203ENST00000284771 EIF4G2P78344 907 aaKnown RBP eCLIP30.82■■■□□ 2.52
PDLIM3-203ENST00000284771 ABCC11Q96J66 1382 aa30.8■■■□□ 2.52
PDLIM3-203ENST00000284771 PIK3R4Q99570 1358 aa30.8■■■□□ 2.52
PDLIM3-203ENST00000284771 AMOTL2Q9Y2J4 779 aa30.79■■■□□ 2.52
PDLIM3-203ENST00000284771 CHD2O14647 1828 aaKnown RBP30.79■■■□□ 2.52
PDLIM3-203ENST00000284771 ST20-MTHFSA0A0A6YYL1 179 aa30.78■■■□□ 2.52
PDLIM3-203ENST00000284771 ARHGEF28Q8N1W1 1705 aaKnown RBP30.76■■■□□ 2.51
PDLIM3-203ENST00000284771 TECPR2O15040 1411 aa30.76■■■□□ 2.51
PDLIM3-203ENST00000284771 KCNA6P17658 529 aa30.74■■■□□ 2.51
PDLIM3-203ENST00000284771 XRN1Q8IZH2 1706 aaKnown RBP30.73■■■□□ 2.51
PDLIM3-203ENST00000284771 ROBO2Q9HCK4 1378 aa30.73■■■□□ 2.51
PDLIM3-203ENST00000284771 KNDC1Q76NI1 1749 aa30.72■■■□□ 2.51
PDLIM3-203ENST00000284771 WAPLQ7Z5K2 1190 aa30.71■■■□□ 2.51
PDLIM3-203ENST00000284771 DMRT2Q9Y5R5 561 aa30.71■■■□□ 2.51
PDLIM3-203ENST00000284771 DLC1Q96QB1 1528 aa30.71■■■□□ 2.51
PDLIM3-203ENST00000284771 PRAM1Q96QH2 718 aa30.71■■■□□ 2.51
PDLIM3-203ENST00000284771 PLEKHH1Q9ULM0 1364 aa30.7■■■□□ 2.51
PDLIM3-203ENST00000284771 TESK2Q96S53 571 aa30.7■■■□□ 2.5
PDLIM3-203ENST00000284771 CPS1P31327 1500 aa30.69■■■□□ 2.5
PDLIM3-203ENST00000284771 EIF3AQ14152 1382 aaKnown RBP30.69■■■□□ 2.5
PDLIM3-203ENST00000284771 SIRT1Q96EB6 747 aa30.68■■■□□ 2.5
PDLIM3-203ENST00000284771 STRCP1A6NGW2 1772 aa30.68■■■□□ 2.5
PDLIM3-203ENST00000284771 CENPJQ9HC77 1338 aaPredicted RBP30.68■■■□□ 2.5
PDLIM3-203ENST00000284771 NWD1Q149M9 1564 aa30.66■■■□□ 2.5
PDLIM3-203ENST00000284771 SAFB2Q14151 953 aaKnown RBP eCLIP30.66■■■□□ 2.5
PDLIM3-203ENST00000284771 FAM135BQ49AJ0 1406 aa30.65■■■□□ 2.5
PDLIM3-203ENST00000284771 PTCH1Q13635 1447 aa30.65■■■□□ 2.5
PDLIM3-203ENST00000284771 POGKQ9P215 609 aa30.64■■■□□ 2.5
PDLIM3-203ENST00000284771 ZNF335Q9H4Z2 1342 aaPredicted RBP30.63■■■□□ 2.49
PDLIM3-203ENST00000284771 C11orf95C9JLR9 678 aaPredicted RBP30.62■■■□□ 2.49
PDLIM3-203ENST00000284771 QRICH2Q9H0J4 1663 aa30.61■■■□□ 2.49
PDLIM3-203ENST00000284771 RBM33Q96EV2 1170 aaKnown RBP30.6■■■□□ 2.49
PDLIM3-203ENST00000284771 ZNF316A6NFI3 1004 aaPredicted RBP30.58■■■□□ 2.49
PDLIM3-203ENST00000284771 SBNO2Q9Y2G9 1366 aa30.58■■■□□ 2.49
PDLIM3-203ENST00000284771 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms