RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 DDX19BQ9UMR2 479 aa19.25■□□□□ 0.67
MSI2-201ENST00000284073 DZIP1LQ8IYY4 767 aaKnown RBP19.25■□□□□ 0.67
MSI2-201ENST00000284073 H0YHG0 523 aa19.25■□□□□ 0.67
MSI2-201ENST00000284073 GRPEL1Q9HAV7 217 aa19.24■□□□□ 0.67
MSI2-201ENST00000284073 PRPF40AO75400 957 aaKnown RBP19.24■□□□□ 0.67
MSI2-201ENST00000284073 SMC3Q9UQE7 1217 aa19.24■□□□□ 0.67
MSI2-201ENST00000284073 SKIDA1Q1XH10 827 aa19.24■□□□□ 0.67
MSI2-201ENST00000284073 FOSBP53539 338 aa19.23■□□□□ 0.67
MSI2-201ENST00000284073 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
MSI2-201ENST00000284073 PCMTD1Q96MG8 357 aaPredicted RBP19.23■□□□□ 0.67
MSI2-201ENST00000284073 RUFY1Q96T51 708 aa19.23■□□□□ 0.67
MSI2-201ENST00000284073 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
MSI2-201ENST00000284073 ESPNB1AK53 854 aa19.22■□□□□ 0.67
MSI2-201ENST00000284073 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
MSI2-201ENST00000284073 IPO7O95373 1038 aaKnown RBP19.22■□□□□ 0.67
MSI2-201ENST00000284073 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
MSI2-201ENST00000284073 SPC24Q8NBT2 197 aa19.21■□□□□ 0.67
MSI2-201ENST00000284073 AK7Q96M32 723 aa19.21■□□□□ 0.67
MSI2-201ENST00000284073 ACBD3Q9H3P7 528 aa19.21■□□□□ 0.67
MSI2-201ENST00000284073 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
MSI2-201ENST00000284073 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
MSI2-201ENST00000284073 TRIM5Q9C035 493 aa19.2■□□□□ 0.66
MSI2-201ENST00000284073 EIF3AQ14152 1382 aaKnown RBP19.2■□□□□ 0.66
MSI2-201ENST00000284073 TSPY26PQ9H489 355 aa19.2■□□□□ 0.66
MSI2-201ENST00000284073 LMOD3Q0VAK6 560 aa19.19■□□□□ 0.66
MSI2-201ENST00000284073 ZKSCAN1P17029 563 aaPredicted RBP19.19■□□□□ 0.66
MSI2-201ENST00000284073 INTS3Q68E01 1043 aaKnown RBP19.19■□□□□ 0.66
MSI2-201ENST00000284073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.668e-7■■□□□ 14.3
MSI2-201ENST00000284073 GGT6Q6P531 493 aa19.19■□□□□ 0.66
MSI2-201ENST00000284073 HDAC5Q9UQL6 1122 aa19.18■□□□□ 0.66
MSI2-201ENST00000284073 RDXP35241 583 aaKnown RBP19.18■□□□□ 0.66
MSI2-201ENST00000284073 CDCA7LQ96GN5 454 aa19.18■□□□□ 0.66
MSI2-201ENST00000284073 USP47Q96K76 1375 aa19.18■□□□□ 0.66
MSI2-201ENST00000284073 PRM3Q9NNZ6 103 aa19.18■□□□□ 0.66
MSI2-201ENST00000284073 CCDC27Q2M243 656 aa19.17■□□□□ 0.66
MSI2-201ENST00000284073 RRP12Q5JTH9 1297 aaKnown RBP19.17■□□□□ 0.66
MSI2-201ENST00000284073 CUX2O14529 1486 aa19.16■□□□□ 0.66
MSI2-201ENST00000284073 ERICH4A6NGS2 130 aa19.16■□□□□ 0.66
MSI2-201ENST00000284073 TERF2IPQ9NYB0 399 aa19.16■□□□□ 0.66
MSI2-201ENST00000284073 PDILTQ8N807 584 aa19.16■□□□□ 0.66
MSI2-201ENST00000284073 MARCH6O60337 910 aa19.16■□□□□ 0.66
MSI2-201ENST00000284073 TTLL5Q6EMB2 1281 aa19.16■□□□□ 0.66
MSI2-201ENST00000284073 NUTM2DQ5VT03 806 aaPredicted RBP19.15■□□□□ 0.66
MSI2-201ENST00000284073 CCDC73Q6ZRK6 1079 aa19.15■□□□□ 0.66
MSI2-201ENST00000284073 LEKR1Q6ZMV7 388 aa19.15■□□□□ 0.66
MSI2-201ENST00000284073 HSP90AB3PQ58FF7 597 aa19.14■□□□□ 0.66
MSI2-201ENST00000284073 WWC1Q8IX03 1113 aa19.14■□□□□ 0.65
MSI2-201ENST00000284073 UBE2Q2Q8WVN8 375 aa19.14■□□□□ 0.65
MSI2-201ENST00000284073 AKNAQ7Z591 1439 aa19.14■□□□□ 0.65
MSI2-201ENST00000284073 RUFY2Q8WXA3 655 aa19.14■□□□□ 0.65
MSI2-201ENST00000284073 ANKRD30AQ9BXX3 1397 aa19.12■□□□□ 0.65
MSI2-201ENST00000284073 MLECQ14165 292 aa19.12■□□□□ 0.65
MSI2-201ENST00000284073 TRAK1Q9UPV9 953 aa19.12■□□□□ 0.65
MSI2-201ENST00000284073 ANKRD20A12PQ8NF67 263 aa19.12■□□□□ 0.65
MSI2-201ENST00000284073 MBD3O95983 291 aa19.12■□□□□ 0.65
MSI2-201ENST00000284073 ZMYND15Q9H091 742 aa19.12■□□□□ 0.65
MSI2-201ENST00000284073 CHMP4AQ9BY43 222 aa19.11■□□□□ 0.65
MSI2-201ENST00000284073 CDC45O75419 566 aa19.11■□□□□ 0.65
MSI2-201ENST00000284073 NAP1L1P55209 391 aaKnown RBP19.11■□□□□ 0.65
MSI2-201ENST00000284073 AKAP17AQ02040 695 aaKnown RBP19.11■□□□□ 0.65
MSI2-201ENST00000284073 TSPYL1Q9H0U9 437 aa19.11■□□□□ 0.65
MSI2-201ENST00000284073 CBX1P83916 185 aa19.1■□□□□ 0.65
MSI2-201ENST00000284073 VPS53Q5VIR6 699 aa19.1■□□□□ 0.65
MSI2-201ENST00000284073 PLCD4Q9BRC7 762 aa19.1■□□□□ 0.65
MSI2-201ENST00000284073 CPLX1O14810 134 aa19.1■□□□□ 0.65
MSI2-201ENST00000284073 LTV1Q96GA3 475 aaPredicted RBP19.1■□□□□ 0.65
MSI2-201ENST00000284073 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
MSI2-201ENST00000284073 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
MSI2-201ENST00000284073 TRIM29Q14134 588 aa19.09■□□□□ 0.65
MSI2-201ENST00000284073 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
MSI2-201ENST00000284073 FMNL2Q96PY5 1086 aa19.09■□□□□ 0.65
MSI2-201ENST00000284073 FBXO3Q9UK99 471 aa19.09■□□□□ 0.65
MSI2-201ENST00000284073 CCDC112Q8NEF3 446 aa19.09■□□□□ 0.65
MSI2-201ENST00000284073 NECTIN2Q92692 538 aa19.08■□□□□ 0.65
MSI2-201ENST00000284073 CHMP4CQ96CF2 233 aa19.08■□□□□ 0.65
MSI2-201ENST00000284073 SDF4Q9BRK5 362 aa19.08■□□□□ 0.65
MSI2-201ENST00000284073 SMC2O95347 1197 aa19.08■□□□□ 0.65
MSI2-201ENST00000284073 MCM4P33991 863 aa19.08■□□□□ 0.64
MSI2-201ENST00000284073 CCDC191Q8NCU4 936 aa19.07■□□□□ 0.64
MSI2-201ENST00000284073 FIBPO43427 364 aa19.07■□□□□ 0.64
MSI2-201ENST00000284073 DHX37Q8IY37 1157 aaKnown RBP19.07■□□□□ 0.64
MSI2-201ENST00000284073 CAGE1Q8TC20 777 aa19.07■□□□□ 0.64
MSI2-201ENST00000284073 CSB-PGBD3P0DP91 1061 aa19.07■□□□□ 0.64
MSI2-201ENST00000284073 AXDND1Q5T1B0 1012 aaPredicted RBP19.07■□□□□ 0.64
MSI2-201ENST00000284073 CDR1P51861 262 aa19.07■□□□□ 0.64
MSI2-201ENST00000284073 CPLX2Q6PUV4 134 aaKnown RBP19.07■□□□□ 0.64
MSI2-201ENST00000284073 LETM1O95202 739 aaPredicted RBP19.06■□□□□ 0.64
MSI2-201ENST00000284073 NEK4P51957 841 aa19.06■□□□□ 0.64
MSI2-201ENST00000284073 NAT10Q9H0A0 1025 aaKnown RBP19.06■□□□□ 0.64
MSI2-201ENST00000284073 HOOK1Q9UJC3 728 aaKnown RBP19.06■□□□□ 0.64
MSI2-201ENST00000284073 ZHX1Q9UKY1 873 aaPredicted RBP19.06■□□□□ 0.64
MSI2-201ENST00000284073 RIPK4P57078 832 aa19.06■□□□□ 0.64
MSI2-201ENST00000284073 CNTLNQ9NXG0 1405 aa19.06■□□□□ 0.64
MSI2-201ENST00000284073 AEBP1Q8IUX7 1158 aa19.06■□□□□ 0.64
MSI2-201ENST00000284073 SYNE3Q6ZMZ3 975 aa19.05■□□□□ 0.64
MSI2-201ENST00000284073 ERCC4Q92889 916 aaPredicted RBP19.05■□□□□ 0.64
MSI2-201ENST00000284073 IFIT2P09913 472 aaKnown RBP19.05■□□□□ 0.64
MSI2-201ENST00000284073 PDCL2Q8N4E4 241 aa19.05■□□□□ 0.64
MSI2-201ENST00000284073 WASHC2AQ641Q2 1341 aa19.05■□□□□ 0.64
MSI2-201ENST00000284073 RNF20Q5VTR2 975 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms