RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 PDE4AP27815 886 aa9.07□□□□□ -0.96
ATM-201ENST00000278616 NASPP49321 788 aaPredicted RBP9.07□□□□□ -0.96
ATM-201ENST00000278616 INCENPQ9NQS7 918 aa9.07□□□□□ -0.96
ATM-201ENST00000278616 RRP7AQ9Y3A4 280 aaKnown RBP9.06□□□□□ -0.96
ATM-201ENST00000278616 KIAA0754O94854 1291 aa9.06□□□□□ -0.96
ATM-201ENST00000278616 RUFY2Q8WXA3 655 aa9.06□□□□□ -0.96
ATM-201ENST00000278616 PDE3BQ13370 1112 aa9.06□□□□□ -0.96
ATM-201ENST00000278616 ZKSCAN1P17029 563 aaPredicted RBP9.06□□□□□ -0.96
ATM-201ENST00000278616 TSPYL1Q9H0U9 437 aa9.06□□□□□ -0.96
ATM-201ENST00000278616 GOLGA6L10A6NI86 522 aa9.05□□□□□ -0.96
ATM-201ENST00000278616 AXDND1Q5T1B0 1012 aaPredicted RBP9.05□□□□□ -0.96
ATM-201ENST00000278616 CCDC43Q96MW1 224 aaKnown RBP9.05□□□□□ -0.96
ATM-201ENST00000278616 NUTM2FA1L443 756 aa9.05□□□□□ -0.96
ATM-201ENST00000278616 OLFM4Q6UX06 510 aa9.05□□□□□ -0.96
ATM-201ENST00000278616 PODXL2Q9NZ53 605 aa9.05□□□□□ -0.96
ATM-201ENST00000278616 FBXW7Q969H0 707 aa9.05□□□□□ -0.96
ATM-201ENST00000278616 CSB-PGBD3P0DP91 1061 aa9.04□□□□□ -0.96
ATM-201ENST00000278616 CPLX1O14810 134 aa9.04□□□□□ -0.96
ATM-201ENST00000278616 R3HCC1Q9Y3T6 440 aaKnown RBP9.04□□□□□ -0.96
ATM-201ENST00000278616 CCP110O43303 1012 aa9.04□□□□□ -0.96
ATM-201ENST00000278616 FANCIQ9NVI1 1328 aa9.04□□□□□ -0.96
ATM-201ENST00000278616 USP8P40818 1118 aa9.04□□□□□ -0.96
ATM-201ENST00000278616 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
ATM-201ENST00000278616 ZFYVE27Q5T4F4 411 aa9.04□□□□□ -0.96
ATM-201ENST00000278616 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
ATM-201ENST00000278616 LTV1Q96GA3 475 aaPredicted RBP9.04□□□□□ -0.96
ATM-201ENST00000278616 LETM1O95202 739 aaPredicted RBP9.03□□□□□ -0.96
ATM-201ENST00000278616 BCL2L13Q9BXK5 485 aa9.03□□□□□ -0.96
ATM-201ENST00000278616 RNF20Q5VTR2 975 aa9.03□□□□□ -0.96
ATM-201ENST00000278616 FOSBP53539 338 aa9.03□□□□□ -0.96
ATM-201ENST00000278616 CT47B1P0C2W7 299 aaPredicted RBP9.03□□□□□ -0.96
ATM-201ENST00000278616 NUCB2P80303 420 aa9.03□□□□□ -0.96
ATM-201ENST00000278616 PDILTQ8N807 584 aa9.03□□□□□ -0.96
ATM-201ENST00000278616 ERLIN2O94905 339 aa9.03□□□□□ -0.96
ATM-201ENST00000278616 TERF2IPQ9NYB0 399 aa9.03□□□□□ -0.96
ATM-201ENST00000278616 TNIKQ9UKE5 1360 aa9.03□□□□□ -0.96
ATM-201ENST00000278616 KIF15Q9NS87 1388 aa9.02□□□□□ -0.96
ATM-201ENST00000278616 ROCK1Q13464 1354 aa9.02□□□□□ -0.96
ATM-201ENST00000278616 NOL10Q9BSC4 688 aaKnown RBP9.02□□□□□ -0.97
ATM-201ENST00000278616 CHMP5Q9NZZ3 219 aa9.02□□□□□ -0.97
ATM-201ENST00000278616 OFD1O75665 1012 aa9.02□□□□□ -0.97
ATM-201ENST00000278616 TRDNQ13061 729 aa9.02□□□□□ -0.97
ATM-201ENST00000278616 ERICH2A1L162 156 aa9.02□□□□□ -0.97
ATM-201ENST00000278616 NEFHP12036 1026 aa9.02□□□□□ -0.97
ATM-201ENST00000278616 GTF2E1P29083 439 aaPredicted RBP9.02□□□□□ -0.97
ATM-201ENST00000278616 SEPT7Q16181 437 aaKnown RBP9.02□□□□□ -0.97
ATM-201ENST00000278616 DEF6Q9H4E7 631 aa9.01□□□□□ -0.97
ATM-201ENST00000278616 CCDC73Q6ZRK6 1079 aa9.01□□□□□ -0.97
ATM-201ENST00000278616 CTDP1Q9Y5B0 961 aaPredicted RBP9.01□□□□□ -0.97
ATM-201ENST00000278616 ANO2Q9NQ90 1003 aa9.01□□□□□ -0.97
ATM-201ENST00000278616 HMGN5P82970 282 aaKnown RBP9.01□□□□□ -0.97
ATM-201ENST00000278616 ENOX2Q16206 610 aaKnown RBP9.01□□□□□ -0.97
ATM-201ENST00000278616 SMC3Q9UQE7 1217 aa9.01□□□□□ -0.97
ATM-201ENST00000278616 ELL2O00472 640 aaPredicted RBP9.01□□□□□ -0.97
ATM-201ENST00000278616 SAFBQ15424 915 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATM-201ENST00000278616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.01□□□□□ -0.972e-7■■■■□ 19.4
ATM-201ENST00000278616 SMARCE1Q969G3 411 aa9.01□□□□□ -0.97
ATM-201ENST00000278616 MRE11P49959 708 aa9□□□□□ -0.97
ATM-201ENST00000278616 SKIDA1Q1XH10 827 aa9□□□□□ -0.97
ATM-201ENST00000278616 RAD21O60216 631 aa9□□□□□ -0.97
ATM-201ENST00000278616 NLRP13Q86W25 1043 aa9□□□□□ -0.97
ATM-201ENST00000278616 ANKRD18AQ8IVF6 992 aa9□□□□□ -0.97
ATM-201ENST00000278616 VPS37CA5D8V6 355 aaPredicted RBP9□□□□□ -0.97
ATM-201ENST00000278616 TTLL5Q6EMB2 1281 aa9□□□□□ -0.97
ATM-201ENST00000278616 NECTIN2Q92692 538 aa9□□□□□ -0.97
ATM-201ENST00000278616 KDM4AO75164 1064 aa9□□□□□ -0.97
ATM-201ENST00000278616 GGT6Q6P531 493 aa9□□□□□ -0.97
ATM-201ENST00000278616 BRMS1Q9HCU9 246 aa9□□□□□ -0.97
ATM-201ENST00000278616 PKD2Q13563 968 aa8.99□□□□□ -0.97
ATM-201ENST00000278616 WRNQ14191 1432 aaPredicted RBP eCLIP8.99□□□□□ -0.97
ATM-201ENST00000278616 NGEFQ8N5V2 710 aa8.99□□□□□ -0.97
ATM-201ENST00000278616 TRIM5Q9C035 493 aa8.99□□□□□ -0.97
ATM-201ENST00000278616 EIF3JO75822 258 aaKnown RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 PRDM2Q13029 1718 aa8.98□□□□□ -0.97
ATM-201ENST00000278616 RB1CC1Q8TDY2 1594 aa8.98□□□□□ -0.97
ATM-201ENST00000278616 NFXL1Q6ZNB6 911 aa8.98□□□□□ -0.97
ATM-201ENST00000278616 C9orf78Q9NZ63 289 aaPredicted RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 TRHP20396 242 aaPredicted RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 VPS37DQ86XT2 251 aa8.98□□□□□ -0.97
ATM-201ENST00000278616 DHX8Q14562 1220 aaKnown RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 INTS3Q68E01 1043 aaKnown RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 CLASRPQ8N2M8 674 aaKnown RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 KIF7Q2M1P5 1343 aa8.98□□□□□ -0.97
ATM-201ENST00000278616 EZRP15311 586 aaKnown RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 RRP1P56182 461 aaKnown RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 KANK4Q5T7N3 995 aaPredicted RBP8.98□□□□□ -0.97
ATM-201ENST00000278616 E9PSI1 815 aa8.97□□□□□ -0.97
ATM-201ENST00000278616 KINO60870 393 aaKnown RBP8.97□□□□□ -0.97
ATM-201ENST00000278616 XBP1P17861 261 aa8.97□□□□□ -0.97
ATM-201ENST00000278616 SDF4Q9BRK5 362 aa8.97□□□□□ -0.97
ATM-201ENST00000278616 LUC7LQ9NQ29 371 aaKnown RBP8.97□□□□□ -0.97
ATM-201ENST00000278616 AMPHP49418 695 aa8.97□□□□□ -0.97
ATM-201ENST00000278616 MEX3CQ5U5Q3 659 aaKnown RBP8.97□□□□□ -0.97
ATM-201ENST00000278616 DHX16O60231 1041 aaKnown RBP8.97□□□□□ -0.97
ATM-201ENST00000278616 SYCP1Q15431 976 aa8.97□□□□□ -0.97
ATM-201ENST00000278616 FILIP1LQ4L180 1135 aa8.97□□□□□ -0.97
ATM-201ENST00000278616 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
ATM-201ENST00000278616 DDX19BQ9UMR2 479 aa8.97□□□□□ -0.97
ATM-201ENST00000278616 MYBBP1AQ9BQG0 1328 aaKnown RBP8.97□□□□□ -0.97
ATM-201ENST00000278616 ZBED9Q6R2W3 1325 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms