RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 ADGRB3O60242 1522 aa12.22□□□□□ -0.45
TRIM43-201ENST00000272395 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
TRIM43-201ENST00000272395 SETD1BQ9UPS6 1966 aaKnown RBP12.22□□□□□ -0.45
TRIM43-201ENST00000272395 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.45
TRIM43-201ENST00000272395 THEMISQ8N1K5 641 aaPredicted RBP12.21□□□□□ -0.45
TRIM43-201ENST00000272395 SUPT16HQ9Y5B9 1047 aaKnown RBP12.21□□□□□ -0.45
TRIM43-201ENST00000272395 UBR1Q8IWV7 1749 aa12.2□□□□□ -0.46
TRIM43-201ENST00000272395 TMEM131LA2VDJ0 1609 aa12.2□□□□□ -0.46
TRIM43-201ENST00000272395 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
TRIM43-201ENST00000272395 TMEM2Q9UHN6 1383 aa12.19□□□□□ -0.46
TRIM43-201ENST00000272395 ANP32CO43423 234 aa12.19□□□□□ -0.46
TRIM43-201ENST00000272395 ZNF326Q5BKZ1 582 aaKnown RBP12.19□□□□□ -0.46
TRIM43-201ENST00000272395 LTKP29376 864 aa12.18□□□□□ -0.46
TRIM43-201ENST00000272395 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
TRIM43-201ENST00000272395 POLR1AO95602 1720 aaPredicted RBP12.18□□□□□ -0.46
TRIM43-201ENST00000272395 ARHGAP23Q9P227 1491 aa12.17□□□□□ -0.46
TRIM43-201ENST00000272395 MYT1Q01538 1121 aa12.16□□□□□ -0.46
TRIM43-201ENST00000272395 TXNDC2Q86VQ3 553 aa12.16□□□□□ -0.46
TRIM43-201ENST00000272395 ANKLE2Q86XL3 938 aa12.16□□□□□ -0.46
TRIM43-201ENST00000272395 RIMS2Q9UQ26 1411 aa12.16□□□□□ -0.46
TRIM43-201ENST00000272395 SPATA31E1Q6ZUB1 1445 aa12.16□□□□□ -0.46
TRIM43-201ENST00000272395 SLIT1O75093 1534 aa12.16□□□□□ -0.46
TRIM43-201ENST00000272395 ZFYVE9O95405 1425 aa12.15□□□□□ -0.46
TRIM43-201ENST00000272395 SCAF11Q99590 1463 aaKnown RBP12.15□□□□□ -0.47
TRIM43-201ENST00000272395 EID1Q9Y6B2 187 aa12.14□□□□□ -0.47
TRIM43-201ENST00000272395 MYO5BQ9ULV0 1848 aa12.14□□□□□ -0.47
TRIM43-201ENST00000272395 KDM5AP29375 1690 aaKnown RBP12.14□□□□□ -0.47
TRIM43-201ENST00000272395 STRCQ7RTU9 1775 aa12.13□□□□□ -0.47
TRIM43-201ENST00000272395 NEURL4Q96JN8 1562 aa12.13□□□□□ -0.47
TRIM43-201ENST00000272395 NEXMIFQ5QGS0 1516 aa12.12□□□□□ -0.47
TRIM43-201ENST00000272395 NPHP4O75161 1426 aaPredicted RBP12.12□□□□□ -0.47
TRIM43-201ENST00000272395 BCANQ96GW7 911 aa12.11□□□□□ -0.47
TRIM43-201ENST00000272395 KIF1BO60333 1816 aa12.11□□□□□ -0.47
TRIM43-201ENST00000272395 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM43-201ENST00000272395 HIRIP3Q9BW71 556 aaPredicted RBP12.1□□□□□ -0.47
TRIM43-201ENST00000272395 MED14O60244 1454 aa12.09□□□□□ -0.47
TRIM43-201ENST00000272395 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
TRIM43-201ENST00000272395 HDGFP51858 240 aaKnown RBP12.09□□□□□ -0.47
TRIM43-201ENST00000272395 EIF4G2P78344 907 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRIM43-201ENST00000272395 SLC26A8Q96RN1 970 aa12.09□□□□□ -0.47
TRIM43-201ENST00000272395 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
TRIM43-201ENST00000272395 RPGRIP1LQ68CZ1 1315 aa12.09□□□□□ -0.47
TRIM43-201ENST00000272395 PLEKHG1Q9ULL1 1385 aa12.08□□□□□ -0.48
TRIM43-201ENST00000272395 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
TRIM43-201ENST00000272395 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
TRIM43-201ENST00000272395 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
TRIM43-201ENST00000272395 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
TRIM43-201ENST00000272395 HSPA5P11021 654 aaKnown RBP12.06□□□□□ -0.48
TRIM43-201ENST00000272395 L3MBTL2Q969R5 705 aa12.06□□□□□ -0.48
TRIM43-201ENST00000272395 NEFLP07196 543 aa12.05□□□□□ -0.48
TRIM43-201ENST00000272395 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
TRIM43-201ENST00000272395 ADAMTS13Q76LX8 1427 aa12.05□□□□□ -0.48
TRIM43-201ENST00000272395 PPLO60437 1756 aa12.05□□□□□ -0.48
TRIM43-201ENST00000272395 WASHC2AQ641Q2 1341 aa12.04□□□□□ -0.48
TRIM43-201ENST00000272395 IFT172Q9UG01 1749 aa12.03□□□□□ -0.48
TRIM43-201ENST00000272395 NRXN3Q9Y4C0 1643 aa12.03□□□□□ -0.48
TRIM43-201ENST00000272395 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
TRIM43-201ENST00000272395 MYOM2P54296 1465 aa12.03□□□□□ -0.48
TRIM43-201ENST00000272395 PIK3C2GO75747 1445 aa12.02□□□□□ -0.49
TRIM43-201ENST00000272395 METP08581 1390 aa12.02□□□□□ -0.49
TRIM43-201ENST00000272395 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
TRIM43-201ENST00000272395 CCDC7Q96M83 1385 aa12.01□□□□□ -0.49
TRIM43-201ENST00000272395 CFAP70Q5T0N1 1121 aa12.01□□□□□ -0.49
TRIM43-201ENST00000272395 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
TRIM43-201ENST00000272395 ALKQ9UM73 1620 aa12□□□□□ -0.49
TRIM43-201ENST00000272395 FKBP8Q14318 412 aa12□□□□□ -0.49
TRIM43-201ENST00000272395 PTPRUQ92729 1446 aa11.99□□□□□ -0.49
TRIM43-201ENST00000272395 TMEM132EQ6IEE7 984 aa11.99□□□□□ -0.49
TRIM43-201ENST00000272395 C14orf93Q9H972 538 aaKnown RBP11.98□□□□□ -0.49
TRIM43-201ENST00000272395 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
TRIM43-201ENST00000272395 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
TRIM43-201ENST00000272395 NBPF8Q3BBV2 869 aa11.97□□□□□ -0.49
TRIM43-201ENST00000272395 RBM33Q96EV2 1170 aaKnown RBP11.97□□□□□ -0.49
TRIM43-201ENST00000272395 KCNA6P17658 529 aa11.97□□□□□ -0.49
TRIM43-201ENST00000272395 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
TRIM43-201ENST00000272395 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
TRIM43-201ENST00000272395 STK26Q9P289 416 aa11.97□□□□□ -0.49
TRIM43-201ENST00000272395 AMOTL2Q9Y2J4 779 aa11.97□□□□□ -0.49
TRIM43-201ENST00000272395 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.49
TRIM43-201ENST00000272395 LTBP4Q8N2S1 1624 aa11.96□□□□□ -0.5
TRIM43-201ENST00000272395 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
TRIM43-201ENST00000272395 SETD1AO15047 1707 aaKnown RBP11.95□□□□□ -0.5
TRIM43-201ENST00000272395 STRCP1A6NGW2 1772 aa11.95□□□□□ -0.5
TRIM43-201ENST00000272395 PIK3R4Q99570 1358 aa11.94□□□□□ -0.5
TRIM43-201ENST00000272395 NWD1Q149M9 1564 aa11.93□□□□□ -0.5
TRIM43-201ENST00000272395 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRIM43-201ENST00000272395 ERICH6BQ5W0A0 696 aa11.93□□□□□ -0.5
TRIM43-201ENST00000272395 PROSER2Q86WR7 435 aaPredicted RBP11.93□□□□□ -0.5
TRIM43-201ENST00000272395 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
TRIM43-201ENST00000272395 ADGRB1O14514 1584 aa11.92□□□□□ -0.5
TRIM43-201ENST00000272395 LRPPRCP42704 1394 aaKnown RBP11.92□□□□□ -0.5
TRIM43-201ENST00000272395 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
TRIM43-201ENST00000272395 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
TRIM43-201ENST00000272395 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
TRIM43-201ENST00000272395 RALGAPBQ86X10 1494 aa11.92□□□□□ -0.5
TRIM43-201ENST00000272395 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
TRIM43-201ENST00000272395 CPS1P31327 1500 aa11.91□□□□□ -0.5
TRIM43-201ENST00000272395 XRN1Q8IZH2 1706 aaKnown RBP11.91□□□□□ -0.5
TRIM43-201ENST00000272395 KIF7Q2M1P5 1343 aa11.91□□□□□ -0.5
TRIM43-201ENST00000272395 LAMC1P11047 1609 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms