RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 IQGAP1P46940 1657 aa22.73■■□□□ 1.23
ATP6V1C2-201ENST00000272238 IFT172Q9UG01 1749 aa22.73■■□□□ 1.23
ATP6V1C2-201ENST00000272238 ZFYVE9O95405 1425 aa22.72■■□□□ 1.23
ATP6V1C2-201ENST00000272238 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
ATP6V1C2-201ENST00000272238 SPATA31E1Q6ZUB1 1445 aa22.71■■□□□ 1.23
ATP6V1C2-201ENST00000272238 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
ATP6V1C2-201ENST00000272238 ANKLE2Q86XL3 938 aa22.7■■□□□ 1.22
ATP6V1C2-201ENST00000272238 LTKP29376 864 aa22.69■■□□□ 1.22
ATP6V1C2-201ENST00000272238 TXNDC2Q86VQ3 553 aa22.69■■□□□ 1.22
ATP6V1C2-201ENST00000272238 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
ATP6V1C2-201ENST00000272238 SIN3AQ96ST3 1273 aa22.67■■□□□ 1.22
ATP6V1C2-201ENST00000272238 NPHP4O75161 1426 aaPredicted RBP22.66■■□□□ 1.22
ATP6V1C2-201ENST00000272238 NEUROD1Q13562 356 aa22.66■■□□□ 1.22
ATP6V1C2-201ENST00000272238 CCER1Q8TC90 406 aaPredicted RBP22.64■■□□□ 1.22
ATP6V1C2-201ENST00000272238 MED14O60244 1454 aa22.64■■□□□ 1.21
ATP6V1C2-201ENST00000272238 BCANQ96GW7 911 aa22.63■■□□□ 1.21
ATP6V1C2-201ENST00000272238 NRXN3Q9Y4C0 1643 aa22.61■■□□□ 1.21
ATP6V1C2-201ENST00000272238 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.61■■□□□ 1.21
ATP6V1C2-201ENST00000272238 HDGFP51858 240 aaKnown RBP22.59■■□□□ 1.21
ATP6V1C2-201ENST00000272238 PLEKHG1Q9ULL1 1385 aa22.59■■□□□ 1.21
ATP6V1C2-201ENST00000272238 RPGRIP1LQ68CZ1 1315 aa22.57■■□□□ 1.2
ATP6V1C2-201ENST00000272238 SETBP1Q9Y6X0 1596 aa22.57■■□□□ 1.2
ATP6V1C2-201ENST00000272238 DMRT2Q9Y5R5 561 aa22.56■■□□□ 1.2
ATP6V1C2-201ENST00000272238 MYOM2P54296 1465 aa22.56■■□□□ 1.2
ATP6V1C2-201ENST00000272238 DCAF11Q8TEB1 546 aa22.55■■□□□ 1.2
ATP6V1C2-201ENST00000272238 SLC26A8Q96RN1 970 aa22.55■■□□□ 1.2
ATP6V1C2-201ENST00000272238 KDM2AQ9Y2K7 1162 aa22.55■■□□□ 1.2
ATP6V1C2-201ENST00000272238 DIP2AQ14689 1571 aa22.54■■□□□ 1.2
ATP6V1C2-201ENST00000272238 ADGRF5Q8IZF2 1346 aa22.54■■□□□ 1.2
ATP6V1C2-201ENST00000272238 SETD1AO15047 1707 aaKnown RBP22.53■■□□□ 1.2
ATP6V1C2-201ENST00000272238 VGFO15240 615 aaPredicted RBP22.53■■□□□ 1.2
ATP6V1C2-201ENST00000272238 TONSLQ96HA7 1378 aa22.52■■□□□ 1.2
ATP6V1C2-201ENST00000272238 ADAMTS13Q76LX8 1427 aa22.52■■□□□ 1.2
ATP6V1C2-201ENST00000272238 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
ATP6V1C2-201ENST00000272238 ALKQ9UM73 1620 aa22.5■■□□□ 1.19
ATP6V1C2-201ENST00000272238 STRCP1A6NGW2 1772 aa22.49■■□□□ 1.19
ATP6V1C2-201ENST00000272238 LAMC1P11047 1609 aa22.48■■□□□ 1.19
ATP6V1C2-201ENST00000272238 ZNF335Q9H4Z2 1342 aaPredicted RBP22.48■■□□□ 1.19
ATP6V1C2-201ENST00000272238 CLSPNQ9HAW4 1339 aa22.48■■□□□ 1.19
ATP6V1C2-201ENST00000272238 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
ATP6V1C2-201ENST00000272238 NRXN1Q9ULB1 1477 aa22.48■■□□□ 1.19
ATP6V1C2-201ENST00000272238 CHD2O14647 1828 aaKnown RBP22.45■■□□□ 1.18
ATP6V1C2-201ENST00000272238 NWD1Q149M9 1564 aa22.43■■□□□ 1.18
ATP6V1C2-201ENST00000272238 ASXL1Q8IXJ9 1541 aa22.43■■□□□ 1.18
ATP6V1C2-201ENST00000272238 METP08581 1390 aa22.41■■□□□ 1.18
ATP6V1C2-201ENST00000272238 PRAG1Q86YV5 1406 aa22.41■■□□□ 1.18
ATP6V1C2-201ENST00000272238 LTBP4Q8N2S1 1624 aa22.4■■□□□ 1.18
ATP6V1C2-201ENST00000272238 XRN1Q8IZH2 1706 aaKnown RBP22.4■■□□□ 1.18
ATP6V1C2-201ENST00000272238 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
ATP6V1C2-201ENST00000272238 CFAP70Q5T0N1 1121 aa22.38■■□□□ 1.17
ATP6V1C2-201ENST00000272238 TRPM1Q7Z4N2 1603 aa22.38■■□□□ 1.17
ATP6V1C2-201ENST00000272238 PTPRUQ92729 1446 aa22.37■■□□□ 1.17
ATP6V1C2-201ENST00000272238 KIAA1210Q9ULL0 1709 aa22.37■■□□□ 1.17
ATP6V1C2-201ENST00000272238 CPS1P31327 1500 aa22.36■■□□□ 1.17
ATP6V1C2-201ENST00000272238 TMEM132EQ6IEE7 984 aa22.35■■□□□ 1.17
ATP6V1C2-201ENST00000272238 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
ATP6V1C2-201ENST00000272238 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
ATP6V1C2-201ENST00000272238 STAC3Q96MF2 364 aa22.34■■□□□ 1.17
ATP6V1C2-201ENST00000272238 KNDC1Q76NI1 1749 aa22.34■■□□□ 1.17
ATP6V1C2-201ENST00000272238 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.17
ATP6V1C2-201ENST00000272238 ADGRB1O14514 1584 aa22.33■■□□□ 1.17
ATP6V1C2-201ENST00000272238 XIRP1Q702N8 1843 aaKnown RBP22.33■■□□□ 1.16
ATP6V1C2-201ENST00000272238 KCNA6P17658 529 aa22.32■■□□□ 1.16
ATP6V1C2-201ENST00000272238 AMOTL2Q9Y2J4 779 aa22.32■■□□□ 1.16
ATP6V1C2-201ENST00000272238 STK26Q9P289 416 aa22.31■■□□□ 1.16
ATP6V1C2-201ENST00000272238 RBM33Q96EV2 1170 aaKnown RBP22.3■■□□□ 1.16
ATP6V1C2-201ENST00000272238 YTHDC2Q9H6S0 1430 aaKnown RBP22.3■■□□□ 1.16
ATP6V1C2-201ENST00000272238 LRRC7Q96NW7 1537 aa22.3■■□□□ 1.16
ATP6V1C2-201ENST00000272238 NBPF8Q3BBV2 869 aa22.29■■□□□ 1.16
ATP6V1C2-201ENST00000272238 ARHGEF28Q8N1W1 1705 aaKnown RBP22.27■■□□□ 1.16
ATP6V1C2-201ENST00000272238 NBPF1Q3BBV0 1214 aa22.26■■□□□ 1.15
ATP6V1C2-201ENST00000272238 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
ATP6V1C2-201ENST00000272238 PTCH1Q13635 1447 aa22.26■■□□□ 1.15
ATP6V1C2-201ENST00000272238 ROCK2O75116 1388 aaKnown RBP22.26■■□□□ 1.15
ATP6V1C2-201ENST00000272238 LRPPRCP42704 1394 aaKnown RBP22.26■■□□□ 1.15
ATP6V1C2-201ENST00000272238 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
ATP6V1C2-201ENST00000272238 RALGAPBQ86X10 1494 aa22.25■■□□□ 1.15
ATP6V1C2-201ENST00000272238 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
ATP6V1C2-201ENST00000272238 ROBO2Q9HCK4 1378 aa22.25■■□□□ 1.15
ATP6V1C2-201ENST00000272238 TECPR2O15040 1411 aa22.22■■□□□ 1.15
ATP6V1C2-201ENST00000272238 TIMELESSQ9UNS1 1208 aa22.22■■□□□ 1.15
ATP6V1C2-201ENST00000272238 TRAK1Q9UPV9 953 aa22.22■■□□□ 1.15
ATP6V1C2-201ENST00000272238 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
ATP6V1C2-201ENST00000272238 CERKQ8TCT0 537 aa22.21■■□□□ 1.15
ATP6V1C2-201ENST00000272238 PLEKHH1Q9ULM0 1364 aa22.2■■□□□ 1.14
ATP6V1C2-201ENST00000272238 DLC1Q96QB1 1528 aa22.19■■□□□ 1.14
ATP6V1C2-201ENST00000272238 ABCC11Q96J66 1382 aa22.19■■□□□ 1.14
ATP6V1C2-201ENST00000272238 SAFB2Q14151 953 aaKnown RBP eCLIP22.18■■□□□ 1.14
ATP6V1C2-201ENST00000272238 WAPLQ7Z5K2 1190 aa22.17■■□□□ 1.14
ATP6V1C2-201ENST00000272238 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.17■■□□□ 1.14
ATP6V1C2-201ENST00000272238 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
ATP6V1C2-201ENST00000272238 PRAM1Q96QH2 718 aa22.16■■□□□ 1.14
ATP6V1C2-201ENST00000272238 IQSEC2Q5JU85 1478 aa22.15■■□□□ 1.14
ATP6V1C2-201ENST00000272238 CARD11Q9BXL7 1154 aa22.15■■□□□ 1.14
ATP6V1C2-201ENST00000272238 MSH6P52701 1360 aa22.14■■□□□ 1.14
ATP6V1C2-201ENST00000272238 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.14
ATP6V1C2-201ENST00000272238 GPRASP1Q5JY77 1395 aa22.14■■□□□ 1.13
ATP6V1C2-201ENST00000272238 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
ATP6V1C2-201ENST00000272238 POGKQ9P215 609 aa22.13■■□□□ 1.13
ATP6V1C2-201ENST00000272238 EIF3AQ14152 1382 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms