RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 MYO6Q9UM54 1294 aa16.11■□□□□ 0.17
PRDM16-201ENST00000270722 ERICH2A1L162 156 aa16.11■□□□□ 0.17
PRDM16-201ENST00000270722 BECN2A8MW95 431 aa16.11■□□□□ 0.17
PRDM16-201ENST00000270722 CCDC173Q0VFZ6 552 aa16.1■□□□□ 0.17
PRDM16-201ENST00000270722 PDE3BQ13370 1112 aa16.1■□□□□ 0.17
PRDM16-201ENST00000270722 RNF20Q5VTR2 975 aa16.1■□□□□ 0.17
PRDM16-201ENST00000270722 IRX3P78415 501 aaPredicted RBP16.1■□□□□ 0.17
PRDM16-201ENST00000270722 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
PRDM16-201ENST00000270722 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
PRDM16-201ENST00000270722 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.17
PRDM16-201ENST00000270722 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.17
PRDM16-201ENST00000270722 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.17
PRDM16-201ENST00000270722 RBM33Q96EV2 1170 aaKnown RBP16.08■□□□□ 0.17
PRDM16-201ENST00000270722 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
PRDM16-201ENST00000270722 CPLX1O14810 134 aa16.07■□□□□ 0.16
PRDM16-201ENST00000270722 HSP90B2PQ58FF3 399 aa16.07■□□□□ 0.16
PRDM16-201ENST00000270722 HSP90AB3PQ58FF7 597 aa16.07■□□□□ 0.16
PRDM16-201ENST00000270722 SAFBQ15424 915 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRDM16-201ENST00000270722 NUP155O75694 1391 aa16.07■□□□□ 0.16
PRDM16-201ENST00000270722 FAM43AQ8N2R8 423 aa16.07■□□□□ 0.16
PRDM16-201ENST00000270722 SLC4A10Q6U841 1118 aa16.07■□□□□ 0.16
PRDM16-201ENST00000270722 REC8O95072 547 aa16.06■□□□□ 0.16
PRDM16-201ENST00000270722 PAIP2Q9BPZ3 127 aaKnown RBP16.06■□□□□ 0.16
PRDM16-201ENST00000270722 BRMS1Q9HCU9 246 aa16.06■□□□□ 0.16
PRDM16-201ENST00000270722 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
PRDM16-201ENST00000270722 DIAPH3Q9NSV4 1193 aa16.06■□□□□ 0.16
PRDM16-201ENST00000270722 RCAN3Q9UKA8 241 aa16.06■□□□□ 0.16
PRDM16-201ENST00000270722 GOLGA6L7A0A1B0GV03 622 aa16.05■□□□□ 0.16
PRDM16-201ENST00000270722 PKD2Q13563 968 aa16.05■□□□□ 0.16
PRDM16-201ENST00000270722 VGFO15240 615 aaPredicted RBP16.05■□□□□ 0.16
PRDM16-201ENST00000270722 GIMAP7Q8NHV1 300 aa16.05■□□□□ 0.16
PRDM16-201ENST00000270722 XBP1P17861 261 aa16.05■□□□□ 0.16
PRDM16-201ENST00000270722 COG3Q96JB2 828 aa16.05■□□□□ 0.16
PRDM16-201ENST00000270722 PSMD1Q99460 953 aa16.05■□□□□ 0.16
PRDM16-201ENST00000270722 C9orf78Q9NZ63 289 aaPredicted RBP16.04■□□□□ 0.16
PRDM16-201ENST00000270722 CGNL1Q0VF96 1302 aa16.04■□□□□ 0.16
PRDM16-201ENST00000270722 GOLGA6L10A6NI86 522 aa16.04■□□□□ 0.16
PRDM16-201ENST00000270722 HSP90AB4PQ58FF6 505 aa16.04■□□□□ 0.16
PRDM16-201ENST00000270722 PAF1Q8N7H5 531 aa16.04■□□□□ 0.16
PRDM16-201ENST00000270722 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
PRDM16-201ENST00000270722 CUX2O14529 1486 aa16.04■□□□□ 0.16
PRDM16-201ENST00000270722 KAT6BQ8WYB5 2073 aa16.03■□□□□ 0.16
PRDM16-201ENST00000270722 KIF3BO15066 747 aa16.02■□□□□ 0.16
PRDM16-201ENST00000270722 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
PRDM16-201ENST00000270722 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.16
PRDM16-201ENST00000270722 PCMTD1Q96MG8 357 aaPredicted RBP16.02■□□□□ 0.15
PRDM16-201ENST00000270722 SMARCA2P51531 1590 aa16.02■□□□□ 0.15
PRDM16-201ENST00000270722 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
PRDM16-201ENST00000270722 MNS1Q8NEH6 495 aa16.01■□□□□ 0.15
PRDM16-201ENST00000270722 RUFY1Q96T51 708 aa16.01■□□□□ 0.15
PRDM16-201ENST00000270722 MFAP1P55081 439 aaKnown RBP16.01■□□□□ 0.15
PRDM16-201ENST00000270722 EVC2Q86UK5 1308 aa16.01■□□□□ 0.15
PRDM16-201ENST00000270722 RAD21O60216 631 aa16■□□□□ 0.15
PRDM16-201ENST00000270722 WDHD1O75717 1129 aaPredicted RBP16■□□□□ 0.15
PRDM16-201ENST00000270722 TRIM21P19474 475 aaKnown RBP16■□□□□ 0.15
PRDM16-201ENST00000270722 TMCO5BA8MYB1 307 aa16■□□□□ 0.15
PRDM16-201ENST00000270722 EPS15P42566 896 aa16■□□□□ 0.15
PRDM16-201ENST00000270722 BRD2P25440 801 aaKnown RBP16■□□□□ 0.15
PRDM16-201ENST00000270722 ERCC4Q92889 916 aaPredicted RBP15.99■□□□□ 0.15
PRDM16-201ENST00000270722 B4GALNT3Q6L9W6 998 aa15.99■□□□□ 0.15
PRDM16-201ENST00000270722 HMGN5P82970 282 aaKnown RBP15.98■□□□□ 0.15
PRDM16-201ENST00000270722 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
PRDM16-201ENST00000270722 DNAI2Q9GZS0 605 aa15.98■□□□□ 0.15
PRDM16-201ENST00000270722 PHF23Q9BUL5 403 aaPredicted RBP15.98■□□□□ 0.15
PRDM16-201ENST00000270722 OFD1O75665 1012 aa15.97■□□□□ 0.15
PRDM16-201ENST00000270722 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
PRDM16-201ENST00000270722 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
PRDM16-201ENST00000270722 RBM28Q9NW13 759 aaKnown RBP15.97■□□□□ 0.15
PRDM16-201ENST00000270722 DESP17661 470 aa15.96■□□□□ 0.15
PRDM16-201ENST00000270722 SART3Q15020 963 aaKnown RBP15.96■□□□□ 0.15
PRDM16-201ENST00000270722 ATF3P18847 181 aa15.96■□□□□ 0.15
PRDM16-201ENST00000270722 DNAJC2Q99543 621 aaKnown RBP15.96■□□□□ 0.15
PRDM16-201ENST00000270722 KIAA0754O94854 1291 aa15.95■□□□□ 0.14
PRDM16-201ENST00000270722 ERC2O15083 957 aa15.95■□□□□ 0.14
PRDM16-201ENST00000270722 ANKRD18AQ8IVF6 992 aa15.95■□□□□ 0.14
PRDM16-201ENST00000270722 RALYLQ86SE5 291 aaKnown RBP15.95■□□□□ 0.14
PRDM16-201ENST00000270722 PSME1Q06323 249 aa15.94■□□□□ 0.14
PRDM16-201ENST00000270722 IFIT2P09913 472 aaKnown RBP15.94■□□□□ 0.14
PRDM16-201ENST00000270722 TXLNBQ8N3L3 684 aa15.94■□□□□ 0.14
PRDM16-201ENST00000270722 MCTP1Q6DN14 999 aa15.94■□□□□ 0.14
PRDM16-201ENST00000270722 LTV1Q96GA3 475 aaPredicted RBP15.94■□□□□ 0.14
PRDM16-201ENST00000270722 GZF1Q9H116 711 aaPredicted RBP15.94■□□□□ 0.14
PRDM16-201ENST00000270722 G3BP1Q13283 466 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRDM16-201ENST00000270722 NAT10Q9H0A0 1025 aaKnown RBP15.94■□□□□ 0.14
PRDM16-201ENST00000270722 PIP4K2AP48426 406 aaPredicted RBP15.94■□□□□ 0.14
PRDM16-201ENST00000270722 DHX8Q14562 1220 aaKnown RBP15.94■□□□□ 0.14
PRDM16-201ENST00000270722 SPRYD3Q8NCJ5 442 aa15.93■□□□□ 0.14
PRDM16-201ENST00000270722 AAMPQ13685 434 aa15.93■□□□□ 0.14
PRDM16-201ENST00000270722 CLGNO14967 610 aa15.93■□□□□ 0.14
PRDM16-201ENST00000270722 CCAR2Q8N163 923 aaKnown RBP15.92■□□□□ 0.14
PRDM16-201ENST00000270722 FAM107BQ9H098 131 aa15.92■□□□□ 0.14
PRDM16-201ENST00000270722 LUC7LQ9NQ29 371 aaKnown RBP15.92■□□□□ 0.14
PRDM16-201ENST00000270722 CCDC144AA2RUR9 1427 aa15.92■□□□□ 0.14
PRDM16-201ENST00000270722 NFXL1Q6ZNB6 911 aa15.92■□□□□ 0.14
PRDM16-201ENST00000270722 CALCOCO1Q9P1Z2 691 aa15.92■□□□□ 0.14
PRDM16-201ENST00000270722 RAPGEF4Q8WZA2 1011 aa15.92■□□□□ 0.14
PRDM16-201ENST00000270722 MIA2Q96PC5 1412 aa15.91■□□□□ 0.14
PRDM16-201ENST00000270722 FYB1O15117 783 aa15.91■□□□□ 0.14
PRDM16-201ENST00000270722 SYTL4Q96C24 671 aaPredicted RBP15.9■□□□□ 0.14
PRDM16-201ENST00000270722 FBXW7Q969H0 707 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms