RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 TEFQ10587 303 aa15.37■□□□□ 0.05
CDH11-201ENST00000268603 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
CDH11-201ENST00000268603 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
CDH11-201ENST00000268603 CCDC173Q0VFZ6 552 aa15.36■□□□□ 0.05
CDH11-201ENST00000268603 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
CDH11-201ENST00000268603 ROCK2O75116 1388 aaKnown RBP15.35■□□□□ 0.05
CDH11-201ENST00000268603 ANKRD62A6NC57 917 aa15.35■□□□□ 0.05
CDH11-201ENST00000268603 NEFHP12036 1026 aa15.34■□□□□ 0.05
CDH11-201ENST00000268603 RBM19Q9Y4C8 960 aaKnown RBP15.34■□□□□ 0.05
CDH11-201ENST00000268603 SOGA1O94964 1423 aa15.34■□□□□ 0.05
CDH11-201ENST00000268603 ATP6V1DQ9Y5K8 247 aa15.34■□□□□ 0.05
CDH11-201ENST00000268603 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
CDH11-201ENST00000268603 SF3B2Q13435 895 aaKnown RBP15.34■□□□□ 0.05
CDH11-201ENST00000268603 BICD2Q8TD16 824 aa15.34■□□□□ 0.05
CDH11-201ENST00000268603 TNIKQ9UKE5 1360 aa15.34■□□□□ 0.05
CDH11-201ENST00000268603 WDR70Q9NW82 654 aa15.33■□□□□ 0.04
CDH11-201ENST00000268603 ANKRD45Q5TZF3 282 aa15.32■□□□□ 0.04
CDH11-201ENST00000268603 IFIT2P09913 472 aaKnown RBP15.32■□□□□ 0.04
CDH11-201ENST00000268603 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
CDH11-201ENST00000268603 PLIN1O60240 522 aa15.31■□□□□ 0.04
CDH11-201ENST00000268603 TTLL5Q6EMB2 1281 aa15.31■□□□□ 0.04
CDH11-201ENST00000268603 CAGE1Q8TC20 777 aa15.31■□□□□ 0.04
CDH11-201ENST00000268603 H0YHG0 523 aa15.31■□□□□ 0.04
CDH11-201ENST00000268603 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
CDH11-201ENST00000268603 SAFBQ15424 915 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDH11-201ENST00000268603 ZRSR2Q15696 482 aaKnown RBP15.31■□□□□ 0.04
CDH11-201ENST00000268603 ACBD3Q9H3P7 528 aa15.3■□□□□ 0.04
CDH11-201ENST00000268603 DDX49Q9Y6V7 483 aaKnown RBP15.3■□□□□ 0.04
CDH11-201ENST00000268603 DDX11L8A8MPP1 907 aa15.3■□□□□ 0.04
CDH11-201ENST00000268603 SYCP1Q15431 976 aa15.3■□□□□ 0.04
CDH11-201ENST00000268603 RUFY2Q8WXA3 655 aa15.3■□□□□ 0.04
CDH11-201ENST00000268603 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
CDH11-201ENST00000268603 CENPJQ9HC77 1338 aaPredicted RBP15.29■□□□□ 0.04
CDH11-201ENST00000268603 RRP7AQ9Y3A4 280 aaKnown RBP15.29■□□□□ 0.04
CDH11-201ENST00000268603 FOXD1Q16676 465 aa15.29■□□□□ 0.04
CDH11-201ENST00000268603 PKD2Q13563 968 aa15.29■□□□□ 0.04
CDH11-201ENST00000268603 ZKSCAN1P17029 563 aaPredicted RBP15.29■□□□□ 0.04
CDH11-201ENST00000268603 FAM177BA6PVY3 158 aa15.28■□□□□ 0.04
CDH11-201ENST00000268603 BRMS1Q9HCU9 246 aa15.28■□□□□ 0.04
CDH11-201ENST00000268603 NEBLO76041 1014 aa15.28■□□□□ 0.04
CDH11-201ENST00000268603 PDILTQ8N807 584 aa15.28■□□□□ 0.04
CDH11-201ENST00000268603 MYO6Q9UM54 1294 aa15.27■□□□□ 0.04
CDH11-201ENST00000268603 FAM13BQ9NYF5 915 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 ATP2B2Q01814 1243 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 EEA1Q15075 1411 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
CDH11-201ENST00000268603 WASHC4Q2M389 1173 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 HSP90B2PQ58FF3 399 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 SPDYE4A6NLX3 237 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 KIF3BO15066 747 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 PSME1Q06323 249 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 HSP90AB3PQ58FF7 597 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
CDH11-201ENST00000268603 WASHC2CQ9Y4E1 1318 aa15.25■□□□□ 0.03
CDH11-201ENST00000268603 MNS1Q8NEH6 495 aa15.25■□□□□ 0.03
CDH11-201ENST00000268603 COG3Q96JB2 828 aa15.25■□□□□ 0.03
CDH11-201ENST00000268603 G3BP1Q13283 466 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDH11-201ENST00000268603 NEUROD6Q96NK8 337 aa15.25■□□□□ 0.03
CDH11-201ENST00000268603 PDCL3Q9H2J4 239 aa15.25■□□□□ 0.03
CDH11-201ENST00000268603 KRT18P05783 430 aaKnown RBP15.25■□□□□ 0.03
CDH11-201ENST00000268603 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
CDH11-201ENST00000268603 SEPT7Q16181 437 aaKnown RBP15.25■□□□□ 0.03
CDH11-201ENST00000268603 ARGLU1Q9NWB6 273 aaPredicted RBP15.25■□□□□ 0.03
CDH11-201ENST00000268603 WASHC2AQ641Q2 1341 aa15.25■□□□□ 0.03
CDH11-201ENST00000268603 SASS6Q6UVJ0 657 aa15.24■□□□□ 0.03
CDH11-201ENST00000268603 VPS37CA5D8V6 355 aaPredicted RBP15.24■□□□□ 0.03
CDH11-201ENST00000268603 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
CDH11-201ENST00000268603 RALYLQ86SE5 291 aaKnown RBP15.23■□□□□ 0.03
CDH11-201ENST00000268603 TRAK1Q9UPV9 953 aa15.23■□□□□ 0.03
CDH11-201ENST00000268603 RNF20Q5VTR2 975 aa15.22■□□□□ 0.03
CDH11-201ENST00000268603 BCL2L13Q9BXK5 485 aa15.22■□□□□ 0.03
CDH11-201ENST00000268603 MPHOSPH10O00566 681 aaKnown RBP15.22■□□□□ 0.03
CDH11-201ENST00000268603 OLFM4Q6UX06 510 aa15.22■□□□□ 0.03
CDH11-201ENST00000268603 DHX37Q8IY37 1157 aaKnown RBP15.22■□□□□ 0.03
CDH11-201ENST00000268603 XBP1P17861 261 aa15.21■□□□□ 0.03
CDH11-201ENST00000268603 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
CDH11-201ENST00000268603 MATR3P43243 847 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDH11-201ENST00000268603 ANKRD18AQ8IVF6 992 aa15.21■□□□□ 0.03
CDH11-201ENST00000268603 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.02
CDH11-201ENST00000268603 AIMP1Q12904 312 aaKnown RBP15.2■□□□□ 0.02
CDH11-201ENST00000268603 IPO9Q96P70 1041 aaKnown RBP15.2■□□□□ 0.02
CDH11-201ENST00000268603 RALBP1Q15311 655 aa15.2■□□□□ 0.02
CDH11-201ENST00000268603 TSPYL1Q9H0U9 437 aa15.2■□□□□ 0.02
CDH11-201ENST00000268603 ENOX2Q16206 610 aaKnown RBP15.2■□□□□ 0.02
CDH11-201ENST00000268603 HSP90AB4PQ58FF6 505 aa15.19■□□□□ 0.02
CDH11-201ENST00000268603 PAXIP1Q6ZW49 1069 aaPredicted RBP15.19■□□□□ 0.02
CDH11-201ENST00000268603 RBM5P52756 815 aaKnown RBP eCLIP15.19■□□□□ 0.02
CDH11-201ENST00000268603 CHMP4BP1P59074 171 aa15.19■□□□□ 0.02
CDH11-201ENST00000268603 SKOR2Q2VWA4 1001 aaPredicted RBP15.19■□□□□ 0.02
CDH11-201ENST00000268603 CWC15Q9P013 229 aaKnown RBP15.19■□□□□ 0.02
CDH11-201ENST00000268603 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
CDH11-201ENST00000268603 STK11IPQ8N1F8 1099 aa15.19■□□□□ 0.02
CDH11-201ENST00000268603 TMEM87AQ8NBN3 555 aa15.19■□□□□ 0.02
CDH11-201ENST00000268603 RIC3Q7Z5B4 369 aa15.19■□□□□ 0.02
CDH11-201ENST00000268603 ZHX3Q9H4I2 956 aa15.18■□□□□ 0.02
CDH11-201ENST00000268603 NACADO15069 1562 aa15.18■□□□□ 0.02
CDH11-201ENST00000268603 CCDC73Q6ZRK6 1079 aa15.18■□□□□ 0.02
CDH11-201ENST00000268603 IFT57Q9NWB7 429 aa15.18■□□□□ 0.02
CDH11-201ENST00000268603 ATP2B1P20020 1258 aa15.18■□□□□ 0.02
CDH11-201ENST00000268603 BRPF1P55201 1214 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms