RNA–Protein interactions for RNA: ENST00000268184.10

CRTC3-201, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRTC3, Length 2,537 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-201ENST00000268184 NOS1P29475 1434 aa23.34■■□□□ 1.33
CRTC3-201ENST00000268184 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
CRTC3-201ENST00000268184 ZBED9Q6R2W3 1325 aa23.31■■□□□ 1.32
CRTC3-201ENST00000268184 ARHGEF40Q8TER5 1519 aa23.31■■□□□ 1.32
CRTC3-201ENST00000268184 MROH2AA6NES4 1674 aa23.3■■□□□ 1.32
CRTC3-201ENST00000268184 ARHGAP31Q2M1Z3 1444 aa23.3■■□□□ 1.32
CRTC3-201ENST00000268184 KTN1Q86UP2 1357 aaKnown RBP23.3■■□□□ 1.32
CRTC3-201ENST00000268184 BCANQ96GW7 911 aa23.29■■□□□ 1.32
CRTC3-201ENST00000268184 SYNMO15061 1565 aa23.29■■□□□ 1.32
CRTC3-201ENST00000268184 AGLP35573 1532 aa23.29■■□□□ 1.32
CRTC3-201ENST00000268184 REREQ9P2R6 1566 aa23.28■■□□□ 1.32
CRTC3-201ENST00000268184 STAC3Q96MF2 364 aa23.28■■□□□ 1.32
CRTC3-201ENST00000268184 KIF1BO60333 1816 aa23.28■■□□□ 1.32
CRTC3-201ENST00000268184 MADDQ8WXG6 1647 aa23.28■■□□□ 1.32
CRTC3-201ENST00000268184 CNGB1Q14028 1251 aaPredicted RBP23.27■■□□□ 1.32
CRTC3-201ENST00000268184 ZC3H13Q5T200 1668 aaKnown RBP23.26■■□□□ 1.31
CRTC3-201ENST00000268184 ADGRB3O60242 1522 aa23.25■■□□□ 1.31
CRTC3-201ENST00000268184 ESF1Q9H501 851 aaKnown RBP23.25■■□□□ 1.31
CRTC3-201ENST00000268184 TESK2Q96S53 571 aa23.25■■□□□ 1.31
CRTC3-201ENST00000268184 RALBP1Q15311 655 aa23.24■■□□□ 1.31
CRTC3-201ENST00000268184 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
CRTC3-201ENST00000268184 SLC52A1Q9NWF4 448 aa23.23■■□□□ 1.31
CRTC3-201ENST00000268184 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
CRTC3-201ENST00000268184 CLTCQ00610 1675 aaKnown RBP23.22■■□□□ 1.31
CRTC3-201ENST00000268184 MYBBP1AQ9BQG0 1328 aaKnown RBP23.21■■□□□ 1.31
CRTC3-201ENST00000268184 DISP3Q9P2K9 1392 aa23.21■■□□□ 1.31
CRTC3-201ENST00000268184 TMC1Q8TDI8 760 aa23.2■■□□□ 1.3
CRTC3-201ENST00000268184 TMF1P82094 1093 aa23.19■■□□□ 1.3
CRTC3-201ENST00000268184 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
CRTC3-201ENST00000268184 IQGAP1P46940 1657 aa23.19■■□□□ 1.3
CRTC3-201ENST00000268184 PREX1Q8TCU6 1659 aa23.19■■□□□ 1.3
CRTC3-201ENST00000268184 MYOM2P54296 1465 aa23.18■■□□□ 1.3
CRTC3-201ENST00000268184 ERVK-7P63135 1459 aa23.18■■□□□ 1.3
CRTC3-201ENST00000268184 PIK3C2BO00750 1634 aa23.18■■□□□ 1.3
CRTC3-201ENST00000268184 ZMYM3Q14202 1370 aa23.18■■□□□ 1.3
CRTC3-201ENST00000268184 PLPPR3Q6T4P5 718 aa23.18■■□□□ 1.3
CRTC3-201ENST00000268184 STAG3Q9UJ98 1225 aa23.18■■□□□ 1.3
CRTC3-201ENST00000268184 TMEM132EQ6IEE7 984 aa23.17■■□□□ 1.3
CRTC3-201ENST00000268184 PNISRQ8TF01 805 aaKnown RBP23.17■■□□□ 1.3
CRTC3-201ENST00000268184 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
CRTC3-201ENST00000268184 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.3
CRTC3-201ENST00000268184 IFT172Q9UG01 1749 aa23.14■■□□□ 1.29
CRTC3-201ENST00000268184 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.29
CRTC3-201ENST00000268184 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.29
CRTC3-201ENST00000268184 KIAA1210Q9ULL0 1709 aa23.14■■□□□ 1.29
CRTC3-201ENST00000268184 SCAF11Q99590 1463 aaKnown RBP23.13■■□□□ 1.29
CRTC3-201ENST00000268184 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
CRTC3-201ENST00000268184 NRXN1Q9ULB1 1477 aa23.12■■□□□ 1.29
CRTC3-201ENST00000268184 PIK3C2GO75747 1445 aa23.11■■□□□ 1.29
CRTC3-201ENST00000268184 LRPPRCP42704 1394 aaKnown RBP23.11■■□□□ 1.29
CRTC3-201ENST00000268184 C14orf93Q9H972 538 aaKnown RBP23.11■■□□□ 1.29
CRTC3-201ENST00000268184 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
CRTC3-201ENST00000268184 PPLO60437 1756 aa23.1■■□□□ 1.29
CRTC3-201ENST00000268184 ERICH6BQ5W0A0 696 aa23.1■■□□□ 1.29
CRTC3-201ENST00000268184 NEXMIFQ5QGS0 1516 aa23.09■■□□□ 1.29
CRTC3-201ENST00000268184 NLRP13Q86W25 1043 aa23.09■■□□□ 1.29
CRTC3-201ENST00000268184 TSHZ2Q9NRE2 1034 aa23.08■■□□□ 1.29
CRTC3-201ENST00000268184 SMG6Q86US8 1419 aaKnown RBP23.08■■□□□ 1.28
CRTC3-201ENST00000268184 PANK3Q9H999 370 aa23.08■■□□□ 1.28
CRTC3-201ENST00000268184 TMEM131LA2VDJ0 1609 aa23.07■■□□□ 1.28
CRTC3-201ENST00000268184 EIF3AQ14152 1382 aaKnown RBP23.07■■□□□ 1.28
CRTC3-201ENST00000268184 MYO5BQ9ULV0 1848 aa23.07■■□□□ 1.28
CRTC3-201ENST00000268184 CDCA8Q53HL2 280 aa23.05■■□□□ 1.28
CRTC3-201ENST00000268184 SPATA31D1Q6ZQQ2 1576 aa23.05■■□□□ 1.28
CRTC3-201ENST00000268184 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
CRTC3-201ENST00000268184 STK26Q9P289 416 aa23.02■■□□□ 1.27
CRTC3-201ENST00000268184 NUDCQ9Y266 331 aa23.02■■□□□ 1.27
CRTC3-201ENST00000268184 A2ML1A8K2U0 1454 aa23■■□□□ 1.27
CRTC3-201ENST00000268184 CC2D1BQ5T0F9 858 aaKnown RBP23■■□□□ 1.27
CRTC3-201ENST00000268184 BCL11AQ9H165 835 aa23■■□□□ 1.27
CRTC3-201ENST00000268184 TNRQ92752 1358 aa22.99■■□□□ 1.27
CRTC3-201ENST00000268184 ADGRB1O14514 1584 aa22.98■■□□□ 1.27
CRTC3-201ENST00000268184 SAFB2Q14151 953 aaKnown RBP eCLIP22.98■■□□□ 1.27
CRTC3-201ENST00000268184 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
CRTC3-201ENST00000268184 CENPJQ9HC77 1338 aaPredicted RBP22.96■■□□□ 1.27
CRTC3-201ENST00000268184 ZFYVE9O95405 1425 aa22.95■■□□□ 1.26
CRTC3-201ENST00000268184 PPP4R2Q9NY27 417 aa22.95■■□□□ 1.26
CRTC3-201ENST00000268184 RIMS2Q9UQ26 1411 aa22.94■■□□□ 1.26
CRTC3-201ENST00000268184 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
CRTC3-201ENST00000268184 KDM5AP29375 1690 aaKnown RBP22.94■■□□□ 1.26
CRTC3-201ENST00000268184 KNSTRNQ9Y448 316 aa22.93■■□□□ 1.26
CRTC3-201ENST00000268184 INSRP06213 1382 aa22.93■■□□□ 1.26
CRTC3-201ENST00000268184 MYOM1P52179 1685 aa22.92■■□□□ 1.26
CRTC3-201ENST00000268184 MYO3AQ8NEV4 1616 aa22.9■■□□□ 1.26
CRTC3-201ENST00000268184 RNF123Q5XPI4 1314 aa22.89■■□□□ 1.25
CRTC3-201ENST00000268184 ASXL1Q8IXJ9 1541 aa22.88■■□□□ 1.25
CRTC3-201ENST00000268184 SENP3-EIF4A1A0A087X0R7 540 aa22.87■■□□□ 1.25
CRTC3-201ENST00000268184 AMER1Q5JTC6 1135 aaPredicted RBP22.87■■□□□ 1.25
CRTC3-201ENST00000268184 SBNO2Q9Y2G9 1366 aa22.87■■□□□ 1.25
CRTC3-201ENST00000268184 BLMP54132 1417 aaPredicted RBP22.86■■□□□ 1.25
CRTC3-201ENST00000268184 NPC1L1Q9UHC9 1359 aa22.86■■□□□ 1.25
CRTC3-201ENST00000268184 PRAM1Q96QH2 718 aa22.84■■□□□ 1.25
CRTC3-201ENST00000268184 ALKQ9UM73 1620 aa22.84■■□□□ 1.25
CRTC3-201ENST00000268184 PDE3BQ13370 1112 aa22.84■■□□□ 1.25
CRTC3-201ENST00000268184 FER1L4A9Z1Z3 1794 aa22.83■■□□□ 1.25
CRTC3-201ENST00000268184 LTKP29376 864 aa22.83■■□□□ 1.25
CRTC3-201ENST00000268184 C3P01024 1663 aa22.83■■□□□ 1.24
CRTC3-201ENST00000268184 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
CRTC3-201ENST00000268184 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.82■■□□□ 1.24
CRTC3-201ENST00000268184 TMEM2Q9UHN6 1383 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms