RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 ARHGEF5Q12774 1597 aa19.8■□□□□ 0.76
SCAMP2-201ENST00000268099 PLA2R1Q13018 1463 aa19.79■□□□□ 0.76
SCAMP2-201ENST00000268099 SPINK5Q9NQ38 1064 aaPredicted RBP19.79■□□□□ 0.76
SCAMP2-201ENST00000268099 CGNL1Q0VF96 1302 aa19.78■□□□□ 0.76
SCAMP2-201ENST00000268099 CCDC141Q6ZP82 1450 aa19.78■□□□□ 0.76
SCAMP2-201ENST00000268099 NUP160Q12769 1436 aa19.77■□□□□ 0.76
SCAMP2-201ENST00000268099 HNRNPMP52272 730 aaKnown RBP eCLIP19.77■□□□□ 0.76
SCAMP2-201ENST00000268099 RNF17Q9BXT8 1623 aaKnown RBP19.77■□□□□ 0.76
SCAMP2-201ENST00000268099 PIK3C2GO75747 1445 aa19.77■□□□□ 0.76
SCAMP2-201ENST00000268099 SYNJ2O15056 1496 aa19.77■□□□□ 0.75
SCAMP2-201ENST00000268099 AMER1Q5JTC6 1135 aaPredicted RBP19.77■□□□□ 0.75
SCAMP2-201ENST00000268099 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
SCAMP2-201ENST00000268099 CCDC146Q8IYE0 955 aa19.76■□□□□ 0.75
SCAMP2-201ENST00000268099 ABCC2Q92887 1545 aa19.76■□□□□ 0.75
SCAMP2-201ENST00000268099 XRCC6P12956 609 aaKnown RBP eCLIP19.76■□□□□ 0.75
SCAMP2-201ENST00000268099 GLIPR1L2Q4G1C9 344 aa19.76■□□□□ 0.75
SCAMP2-201ENST00000268099 GOLGA6L3A6NEY3 463 aa19.75■□□□□ 0.75
SCAMP2-201ENST00000268099 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
SCAMP2-201ENST00000268099 CLUAP1Q96AJ1 413 aa19.75■□□□□ 0.75
SCAMP2-201ENST00000268099 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
SCAMP2-201ENST00000268099 FSD2A1L4K1 749 aa19.74■□□□□ 0.75
SCAMP2-201ENST00000268099 E9PSI1 815 aa19.74■□□□□ 0.75
SCAMP2-201ENST00000268099 NINLQ9Y2I6 1382 aa19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 SYNMO15061 1565 aa19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 ASXL1Q8IXJ9 1541 aa19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 UNC13BO14795 1591 aa19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 APAF1O14727 1248 aa19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 PKNOX2Q96KN3 472 aa19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 NAP1L5Q96NT1 182 aaPredicted RBP19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 ARXQ96QS3 562 aa19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 PNNQ9H307 717 aaKnown RBP19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 UPF2Q9HAU5 1272 aaKnown RBP19.73■□□□□ 0.75
SCAMP2-201ENST00000268099 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
SCAMP2-201ENST00000268099 CLCN1P35523 988 aa19.71■□□□□ 0.75
SCAMP2-201ENST00000268099 TBC1D32Q96NH3 1257 aa19.71■□□□□ 0.75
SCAMP2-201ENST00000268099 PLXNC1O60486 1568 aa19.7■□□□□ 0.74
SCAMP2-201ENST00000268099 COG6Q9Y2V7 657 aa19.69■□□□□ 0.74
SCAMP2-201ENST00000268099 ABCA8O94911 1581 aa19.69■□□□□ 0.74
SCAMP2-201ENST00000268099 PANK1Q8TE04 598 aa19.69■□□□□ 0.74
SCAMP2-201ENST00000268099 PANK2Q9BZ23 570 aa19.69■□□□□ 0.74
SCAMP2-201ENST00000268099 IQGAP1P46940 1657 aa19.68■□□□□ 0.74
SCAMP2-201ENST00000268099 ZMYM3Q14202 1370 aa19.68■□□□□ 0.74
SCAMP2-201ENST00000268099 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
SCAMP2-201ENST00000268099 MCM4P33991 863 aa19.68■□□□□ 0.74
SCAMP2-201ENST00000268099 CENPJQ9HC77 1338 aaPredicted RBP19.67■□□□□ 0.74
SCAMP2-201ENST00000268099 DMRT2Q9Y5R5 561 aa19.67■□□□□ 0.74
SCAMP2-201ENST00000268099 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
SCAMP2-201ENST00000268099 SAMD9LQ8IVG5 1584 aa19.66■□□□□ 0.74
SCAMP2-201ENST00000268099 IQGAP3Q86VI3 1631 aa19.66■□□□□ 0.74
SCAMP2-201ENST00000268099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.74
SCAMP2-201ENST00000268099 NPC1L1Q9UHC9 1359 aa19.66■□□□□ 0.74
SCAMP2-201ENST00000268099 MYOM1P52179 1685 aa19.65■□□□□ 0.74
SCAMP2-201ENST00000268099 GZF1Q9H116 711 aaPredicted RBP19.65■□□□□ 0.74
SCAMP2-201ENST00000268099 ATP10BO94823 1461 aa19.65■□□□□ 0.74
SCAMP2-201ENST00000268099 HSP90AA1P07900 732 aaKnown RBP19.64■□□□□ 0.74
SCAMP2-201ENST00000268099 CDCA8Q53HL2 280 aa19.64■□□□□ 0.74
SCAMP2-201ENST00000268099 PMFBP1Q8TBY8 1022 aa19.64■□□□□ 0.74
SCAMP2-201ENST00000268099 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
SCAMP2-201ENST00000268099 NGEFQ8N5V2 710 aa19.64■□□□□ 0.73
SCAMP2-201ENST00000268099 HSP90AA2PQ14568 343 aaPredicted RBP19.63■□□□□ 0.73
SCAMP2-201ENST00000268099 RRP9O43818 475 aaKnown RBP19.63■□□□□ 0.73
SCAMP2-201ENST00000268099 ATP10AO60312 1499 aa19.62■□□□□ 0.73
SCAMP2-201ENST00000268099 SPRYD3Q8NCJ5 442 aa19.62■□□□□ 0.73
SCAMP2-201ENST00000268099 CDC42BPBQ9Y5S2 1711 aa19.62■□□□□ 0.73
SCAMP2-201ENST00000268099 MRE11P49959 708 aa19.61■□□□□ 0.73
SCAMP2-201ENST00000268099 MADDQ8WXG6 1647 aa19.61■□□□□ 0.73
SCAMP2-201ENST00000268099 TRAK2O60296 914 aa19.61■□□□□ 0.73
SCAMP2-201ENST00000268099 AAMPQ13685 434 aa19.61■□□□□ 0.73
SCAMP2-201ENST00000268099 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
SCAMP2-201ENST00000268099 PDZRN3Q9UPQ7 1066 aa19.6■□□□□ 0.73
SCAMP2-201ENST00000268099 PREX2Q70Z35 1606 aa19.6■□□□□ 0.73
SCAMP2-201ENST00000268099 RSPH4AQ5TD94 716 aa19.6■□□□□ 0.73
SCAMP2-201ENST00000268099 CHMP5Q9NZZ3 219 aa19.6■□□□□ 0.73
SCAMP2-201ENST00000268099 PCDHB15Q9Y5E8 787 aa19.6■□□□□ 0.73
SCAMP2-201ENST00000268099 MAST1Q9Y2H9 1570 aa19.58■□□□□ 0.73
SCAMP2-201ENST00000268099 ZMYND15Q9H091 742 aa19.58■□□□□ 0.72
SCAMP2-201ENST00000268099 WWC1Q8IX03 1113 aa19.57■□□□□ 0.72
SCAMP2-201ENST00000268099 SCAF11Q99590 1463 aaKnown RBP19.56■□□□□ 0.72
SCAMP2-201ENST00000268099 KDM5AP29375 1690 aaKnown RBP19.56■□□□□ 0.72
SCAMP2-201ENST00000268099 RTEL1-TNFRSF6BF6WH68 1400 aa19.56■□□□□ 0.72
SCAMP2-201ENST00000268099 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
SCAMP2-201ENST00000268099 GRPEL1Q9HAV7 217 aa19.55■□□□□ 0.72
SCAMP2-201ENST00000268099 SYCP2Q9BX26 1530 aa19.55■□□□□ 0.72
SCAMP2-201ENST00000268099 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
SCAMP2-201ENST00000268099 MYH16Q9H6N6 1097 aa19.54■□□□□ 0.72
SCAMP2-201ENST00000268099 RLBP1P12271 317 aa19.54■□□□□ 0.72
SCAMP2-201ENST00000268099 ESPNB1AK53 854 aa19.53■□□□□ 0.72
SCAMP2-201ENST00000268099 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
SCAMP2-201ENST00000268099 RWDD1Q9H446 243 aaPredicted RBP19.53■□□□□ 0.72
SCAMP2-201ENST00000268099 SCAPERQ9BY12 1400 aa19.53■□□□□ 0.72
SCAMP2-201ENST00000268099 C22orf23Q9BZE7 217 aa19.53■□□□□ 0.72
SCAMP2-201ENST00000268099 ISY1Q9ULR0 285 aaKnown RBP19.53■□□□□ 0.72
SCAMP2-201ENST00000268099 CEP152O94986 1710 aa19.53■□□□□ 0.72
SCAMP2-201ENST00000268099 DDX11L8A8MPP1 907 aa19.52■□□□□ 0.72
SCAMP2-201ENST00000268099 SPHKAPQ2M3C7 1700 aa19.52■□□□□ 0.72
SCAMP2-201ENST00000268099 TNNQ9UQP3 1299 aa19.52■□□□□ 0.72
SCAMP2-201ENST00000268099 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
SCAMP2-201ENST00000268099 DUOX2Q9NRD8 1548 aa19.5■□□□□ 0.71
SCAMP2-201ENST00000268099 MFAP1P55081 439 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms