RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 MROH2AA6NES4 1674 aa17.4■□□□□ 0.38
PRPF6-201ENST00000266079 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.38
PRPF6-201ENST00000266079 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
PRPF6-201ENST00000266079 KIF1BO60333 1816 aa17.39■□□□□ 0.37
PRPF6-201ENST00000266079 CFAP70Q5T0N1 1121 aa17.39■□□□□ 0.37
PRPF6-201ENST00000266079 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
PRPF6-201ENST00000266079 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
PRPF6-201ENST00000266079 PRAG1Q86YV5 1406 aa17.37■□□□□ 0.37
PRPF6-201ENST00000266079 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
PRPF6-201ENST00000266079 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
PRPF6-201ENST00000266079 C3P01024 1663 aa17.35■□□□□ 0.37
PRPF6-201ENST00000266079 CCER2I3L3R5 266 aa17.35■□□□□ 0.37
PRPF6-201ENST00000266079 ADGRB3O60242 1522 aa17.35■□□□□ 0.37
PRPF6-201ENST00000266079 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.373e-9■■■■■ 77.2
PRPF6-201ENST00000266079 TMEM132EQ6IEE7 984 aa17.34■□□□□ 0.37
PRPF6-201ENST00000266079 PIK3C2BO00750 1634 aa17.34■□□□□ 0.37
PRPF6-201ENST00000266079 MYO5BQ9ULV0 1848 aa17.34■□□□□ 0.37
PRPF6-201ENST00000266079 POLR3GLQ9BT43 218 aa17.33■□□□□ 0.37
PRPF6-201ENST00000266079 UHRF1BP1Q6BDS2 1440 aa17.32■□□□□ 0.36
PRPF6-201ENST00000266079 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
PRPF6-201ENST00000266079 A2ML1A8K2U0 1454 aa17.31■□□□□ 0.36
PRPF6-201ENST00000266079 ADAMTSL3P82987 1691 aa17.3■□□□□ 0.36
PRPF6-201ENST00000266079 USP47Q96K76 1375 aa17.3■□□□□ 0.36
PRPF6-201ENST00000266079 KDM4FA0A1W2PPD8 638 aa17.3■□□□□ 0.36
PRPF6-201ENST00000266079 TMEM131LA2VDJ0 1609 aa17.3■□□□□ 0.36
PRPF6-201ENST00000266079 ST20-MTHFSA0A0A6YYL1 179 aa17.29■□□□□ 0.36
PRPF6-201ENST00000266079 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
PRPF6-201ENST00000266079 STK26Q9P289 416 aa17.29■□□□□ 0.36
PRPF6-201ENST00000266079 RPGRIP1LQ68CZ1 1315 aa17.28■□□□□ 0.36
PRPF6-201ENST00000266079 PTPRMP28827 1452 aa17.28■□□□□ 0.36
PRPF6-201ENST00000266079 RIMS2Q9UQ26 1411 aa17.28■□□□□ 0.36
PRPF6-201ENST00000266079 RALGAPBQ86X10 1494 aa17.27■□□□□ 0.36
PRPF6-201ENST00000266079 LTKP29376 864 aa17.27■□□□□ 0.35
PRPF6-201ENST00000266079 TXNDC2Q86VQ3 553 aa17.26■□□□□ 0.35
PRPF6-201ENST00000266079 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
PRPF6-201ENST00000266079 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
PRPF6-201ENST00000266079 ANP32CO43423 234 aa17.26■□□□□ 0.35
PRPF6-201ENST00000266079 C11orf95C9JLR9 678 aaPredicted RBP17.25■□□□□ 0.35
PRPF6-201ENST00000266079 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRPF6-201ENST00000266079 SLC26A8Q96RN1 970 aa17.24■□□□□ 0.35
PRPF6-201ENST00000266079 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
PRPF6-201ENST00000266079 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
PRPF6-201ENST00000266079 PPLO60437 1756 aa17.23■□□□□ 0.35
PRPF6-201ENST00000266079 TRPM1Q7Z4N2 1603 aa17.23■□□□□ 0.35
PRPF6-201ENST00000266079 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
PRPF6-201ENST00000266079 C14orf93Q9H972 538 aaKnown RBP17.23■□□□□ 0.35
PRPF6-201ENST00000266079 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
PRPF6-201ENST00000266079 MYOM2P54296 1465 aa17.22■□□□□ 0.35
PRPF6-201ENST00000266079 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
PRPF6-201ENST00000266079 EID1Q9Y6B2 187 aa17.21■□□□□ 0.35
PRPF6-201ENST00000266079 HSPA2P54652 639 aa17.21■□□□□ 0.35
PRPF6-201ENST00000266079 IFT172Q9UG01 1749 aa17.2■□□□□ 0.34
PRPF6-201ENST00000266079 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
PRPF6-201ENST00000266079 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRPF6-201ENST00000266079 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
PRPF6-201ENST00000266079 MYO3AQ8NEV4 1616 aa17.19■□□□□ 0.34
PRPF6-201ENST00000266079 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
PRPF6-201ENST00000266079 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
PRPF6-201ENST00000266079 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
PRPF6-201ENST00000266079 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
PRPF6-201ENST00000266079 GPRASP1Q5JY77 1395 aa17.17■□□□□ 0.34
PRPF6-201ENST00000266079 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
PRPF6-201ENST00000266079 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
PRPF6-201ENST00000266079 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
PRPF6-201ENST00000266079 SETD1BQ9UPS6 1966 aaKnown RBP17.16■□□□□ 0.34
PRPF6-201ENST00000266079 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
PRPF6-201ENST00000266079 NCKAP5LQ9HCH0 1330 aa17.13■□□□□ 0.33
PRPF6-201ENST00000266079 METP08581 1390 aa17.13■□□□□ 0.33
PRPF6-201ENST00000266079 ANKLE2Q86XL3 938 aa17.13■□□□□ 0.33
PRPF6-201ENST00000266079 DEKP35659 375 aaKnown RBP17.13■□□□□ 0.33
PRPF6-201ENST00000266079 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
PRPF6-201ENST00000266079 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
PRPF6-201ENST00000266079 ERICH6BQ5W0A0 696 aa17.11■□□□□ 0.33
PRPF6-201ENST00000266079 TESK2Q96S53 571 aa17.11■□□□□ 0.33
PRPF6-201ENST00000266079 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
PRPF6-201ENST00000266079 POGKQ9P215 609 aa17.1■□□□□ 0.33
PRPF6-201ENST00000266079 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
PRPF6-201ENST00000266079 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
PRPF6-201ENST00000266079 ADGRB1O14514 1584 aa17.09■□□□□ 0.33
PRPF6-201ENST00000266079 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
PRPF6-201ENST00000266079 DISP3Q9P2K9 1392 aa17.09■□□□□ 0.33
PRPF6-201ENST00000266079 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
PRPF6-201ENST00000266079 MINK1Q8N4C8 1332 aaPredicted RBP17.08■□□□□ 0.33
PRPF6-201ENST00000266079 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.33
PRPF6-201ENST00000266079 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
PRPF6-201ENST00000266079 HNRNPUQ00839 825 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRPF6-201ENST00000266079 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
PRPF6-201ENST00000266079 EIF3AQ14152 1382 aaKnown RBP17.07■□□□□ 0.32
PRPF6-201ENST00000266079 PLEKHG1Q9ULL1 1385 aa17.07■□□□□ 0.32
PRPF6-201ENST00000266079 ARHGAP23Q9P227 1491 aa17.06■□□□□ 0.32
PRPF6-201ENST00000266079 TMF1P82094 1093 aa17.06■□□□□ 0.32
PRPF6-201ENST00000266079 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
PRPF6-201ENST00000266079 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
PRPF6-201ENST00000266079 SLIT1O75093 1534 aa17.06■□□□□ 0.32
PRPF6-201ENST00000266079 IQGAP1P46940 1657 aa17.06■□□□□ 0.32
PRPF6-201ENST00000266079 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
PRPF6-201ENST00000266079 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
PRPF6-201ENST00000266079 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
PRPF6-201ENST00000266079 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
PRPF6-201ENST00000266079 KDM5AP29375 1690 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms