RNA–Protein interactions for RNA: ENST00000265421.8

POLB-201, Transcript of DNA polymerase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLB, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-201ENST00000265421 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
POLB-201ENST00000265421 PPP1R15AO75807 674 aaPredicted RBP16.52■□□□□ 0.24
POLB-201ENST00000265421 BCANQ96GW7 911 aa16.5■□□□□ 0.23
POLB-201ENST00000265421 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
POLB-201ENST00000265421 MPHOSPH9Q99550 1183 aa16.49■□□□□ 0.23
POLB-201ENST00000265421 E9PCH4 1651 aa16.49■□□□□ 0.23
POLB-201ENST00000265421 GCC2Q8IWJ2 1684 aa16.49■□□□□ 0.23
POLB-201ENST00000265421 POLR1AO95602 1720 aaPredicted RBP16.49■□□□□ 0.23
POLB-201ENST00000265421 LRRC7Q96NW7 1537 aa16.48■□□□□ 0.23
POLB-201ENST00000265421 HRCP23327 699 aa16.47■□□□□ 0.23
POLB-201ENST00000265421 SETD5Q9C0A6 1442 aa16.47■□□□□ 0.23
POLB-201ENST00000265421 TMEM131LA2VDJ0 1609 aa16.47■□□□□ 0.23
POLB-201ENST00000265421 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
POLB-201ENST00000265421 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
POLB-201ENST00000265421 CFAP65Q6ZU64 1925 aaKnown RBP16.45■□□□□ 0.22
POLB-201ENST00000265421 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
POLB-201ENST00000265421 RPGRIP1LQ68CZ1 1315 aa16.44■□□□□ 0.22
POLB-201ENST00000265421 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
POLB-201ENST00000265421 TRPM2O94759 1503 aa16.43■□□□□ 0.22
POLB-201ENST00000265421 ADAMTS13Q76LX8 1427 aa16.43■□□□□ 0.22
POLB-201ENST00000265421 VGFO15240 615 aaPredicted RBP16.43■□□□□ 0.22
POLB-201ENST00000265421 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
POLB-201ENST00000265421 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
POLB-201ENST00000265421 NCOA3Q9Y6Q9 1424 aa16.39■□□□□ 0.21
POLB-201ENST00000265421 RAB3GAP2Q9H2M9 1393 aa16.39■□□□□ 0.21
POLB-201ENST00000265421 AMOTL2Q9Y2J4 779 aa16.38■□□□□ 0.21
POLB-201ENST00000265421 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
POLB-201ENST00000265421 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
POLB-201ENST00000265421 HSPA1LP34931 641 aa16.36■□□□□ 0.21
POLB-201ENST00000265421 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
POLB-201ENST00000265421 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
POLB-201ENST00000265421 C19orf44Q9H6X5 657 aa16.34■□□□□ 0.21
POLB-201ENST00000265421 FAM135BQ49AJ0 1406 aa16.33■□□□□ 0.21
POLB-201ENST00000265421 CLTCL1P53675 1640 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 METP08581 1390 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 MSH6P52701 1360 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 NWD1Q149M9 1564 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 STRCP1A6NGW2 1772 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 SPHKAPQ2M3C7 1700 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 ALKQ9UM73 1620 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 SPATA31E1Q6ZUB1 1445 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 PTPRUQ92729 1446 aa16.32■□□□□ 0.2
POLB-201ENST00000265421 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
POLB-201ENST00000265421 SLAIN2Q9P270 581 aa16.31■□□□□ 0.2
POLB-201ENST00000265421 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
POLB-201ENST00000265421 ANKRD30BQ9BXX2 1392 aa16.3■□□□□ 0.2
POLB-201ENST00000265421 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
POLB-201ENST00000265421 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
POLB-201ENST00000265421 ADGRF5Q8IZF2 1346 aa16.27■□□□□ 0.19
POLB-201ENST00000265421 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
POLB-201ENST00000265421 ATF3P18847 181 aa16.25■□□□□ 0.19
POLB-201ENST00000265421 STAC3Q96MF2 364 aa16.24■□□□□ 0.19
POLB-201ENST00000265421 C14orf93Q9H972 538 aaKnown RBP16.22■□□□□ 0.19
POLB-201ENST00000265421 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
POLB-201ENST00000265421 NRXN3Q9Y4C0 1643 aa16.22■□□□□ 0.19
POLB-201ENST00000265421 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
POLB-201ENST00000265421 DISP3Q9P2K9 1392 aa16.21■□□□□ 0.19
POLB-201ENST00000265421 DCCP43146 1447 aa16.2■□□□□ 0.18
POLB-201ENST00000265421 CHD2O14647 1828 aaKnown RBP16.2■□□□□ 0.18
POLB-201ENST00000265421 SIRT1Q96EB6 747 aa16.19■□□□□ 0.18
POLB-201ENST00000265421 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
POLB-201ENST00000265421 ABCC11Q96J66 1382 aa16.19■□□□□ 0.18
POLB-201ENST00000265421 ROBO2Q9HCK4 1378 aa16.19■□□□□ 0.18
POLB-201ENST00000265421 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
POLB-201ENST00000265421 LRPPRCP42704 1394 aaKnown RBP16.16■□□□□ 0.18
POLB-201ENST00000265421 TMEM132EQ6IEE7 984 aa16.16■□□□□ 0.18
POLB-201ENST00000265421 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
POLB-201ENST00000265421 KIF1BO60333 1816 aa16.15■□□□□ 0.18
POLB-201ENST00000265421 NRXN1Q9ULB1 1477 aa16.15■□□□□ 0.18
POLB-201ENST00000265421 ADGRL3Q9HAR2 1447 aa16.15■□□□□ 0.18
POLB-201ENST00000265421 CFAP70Q5T0N1 1121 aa16.15■□□□□ 0.18
POLB-201ENST00000265421 XIRP1Q702N8 1843 aaKnown RBP16.14■□□□□ 0.17
POLB-201ENST00000265421 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
POLB-201ENST00000265421 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
POLB-201ENST00000265421 TECPR2O15040 1411 aa16.13■□□□□ 0.17
POLB-201ENST00000265421 MYOM2P54296 1465 aa16.13■□□□□ 0.17
POLB-201ENST00000265421 STK26Q9P289 416 aa16.13■□□□□ 0.17
POLB-201ENST00000265421 MST1RQ04912 1400 aa16.12■□□□□ 0.17
POLB-201ENST00000265421 DHX57Q6P158 1386 aaKnown RBP16.11■□□□□ 0.17
POLB-201ENST00000265421 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
POLB-201ENST00000265421 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
POLB-201ENST00000265421 JCADQ9P266 1359 aa16.1■□□□□ 0.17
POLB-201ENST00000265421 YTHDC2Q9H6S0 1430 aaKnown RBP16.09■□□□□ 0.17
POLB-201ENST00000265421 ILDR2Q71H61 639 aa16.09■□□□□ 0.17
POLB-201ENST00000265421 TRIM26Q12899 539 aaPredicted RBP16.08■□□□□ 0.16
POLB-201ENST00000265421 PPLO60437 1756 aa16.08■□□□□ 0.16
POLB-201ENST00000265421 C1orf167Q5SNV9 1468 aa16.07■□□□□ 0.16
POLB-201ENST00000265421 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
POLB-201ENST00000265421 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.06■□□□□ 0.16
POLB-201ENST00000265421 ROBO1Q9Y6N7 1651 aa16.06■□□□□ 0.16
POLB-201ENST00000265421 ORAI2Q96SN7 254 aa16.05■□□□□ 0.16
POLB-201ENST00000265421 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
POLB-201ENST00000265421 PLEKHH1Q9ULM0 1364 aa16.04■□□□□ 0.16
POLB-201ENST00000265421 SETD1AO15047 1707 aaKnown RBP16.04■□□□□ 0.16
POLB-201ENST00000265421 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
POLB-201ENST00000265421 ASXL1Q8IXJ9 1541 aa16.03■□□□□ 0.16
POLB-201ENST00000265421 MED1Q15648 1581 aaPredicted RBP16.02■□□□□ 0.16
POLB-201ENST00000265421 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.16
POLB-201ENST00000265421 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms