RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 NEO1Q92859 1461 aa13.77□□□□□ -0.2
LSG1-201ENST00000265245 PDE3BQ13370 1112 aa13.77□□□□□ -0.2
LSG1-201ENST00000265245 MADDQ8WXG6 1647 aa13.77□□□□□ -0.21
LSG1-201ENST00000265245 TET3O43151 1660 aa13.77□□□□□ -0.21
LSG1-201ENST00000265245 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
LSG1-201ENST00000265245 FRMPD1Q5SYB0 1578 aa13.77□□□□□ -0.21
LSG1-201ENST00000265245 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
LSG1-201ENST00000265245 KNSTRNQ9Y448 316 aa13.76□□□□□ -0.21
LSG1-201ENST00000265245 EIF3AQ14152 1382 aaKnown RBP13.76□□□□□ -0.21
LSG1-201ENST00000265245 EIF5BO60841 1220 aaKnown RBP13.76□□□□□ -0.21
LSG1-201ENST00000265245 SPHKAPQ2M3C7 1700 aa13.75□□□□□ -0.21
LSG1-201ENST00000265245 INSRP06213 1382 aa13.75□□□□□ -0.21
LSG1-201ENST00000265245 VWDEQ8N2E2 1590 aa13.75□□□□□ -0.21
LSG1-201ENST00000265245 CLTCL1P53675 1640 aa13.75□□□□□ -0.21
LSG1-201ENST00000265245 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
LSG1-201ENST00000265245 CEP152O94986 1710 aa13.73□□□□□ -0.21
LSG1-201ENST00000265245 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
LSG1-201ENST00000265245 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
LSG1-201ENST00000265245 ZMYM4Q5VZL5 1548 aa13.73□□□□□ -0.21
LSG1-201ENST00000265245 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
LSG1-201ENST00000265245 ZNF518AQ6AHZ1 1483 aa13.71□□□□□ -0.21
LSG1-201ENST00000265245 IQGAP1P46940 1657 aa13.71□□□□□ -0.21
LSG1-201ENST00000265245 RRP1P56182 461 aaKnown RBP13.71□□□□□ -0.21
LSG1-201ENST00000265245 NEURL4Q96JN8 1562 aa13.7□□□□□ -0.22
LSG1-201ENST00000265245 BLMP54132 1417 aaPredicted RBP13.7□□□□□ -0.22
LSG1-201ENST00000265245 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
LSG1-201ENST00000265245 AMER1Q5JTC6 1135 aaPredicted RBP13.68□□□□□ -0.22
LSG1-201ENST00000265245 MYOM2P54296 1465 aa13.68□□□□□ -0.22
LSG1-201ENST00000265245 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
LSG1-201ENST00000265245 EFCAB6Q5THR3 1501 aa13.68□□□□□ -0.22
LSG1-201ENST00000265245 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
LSG1-201ENST00000265245 KIDINS220Q9ULH0 1771 aa13.68□□□□□ -0.22
LSG1-201ENST00000265245 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.22
LSG1-201ENST00000265245 SYNMO15061 1565 aa13.68□□□□□ -0.22
LSG1-201ENST00000265245 PPP2R1AP30153 589 aa13.67□□□□□ -0.22
LSG1-201ENST00000265245 ADGRF5Q8IZF2 1346 aa13.66□□□□□ -0.22
LSG1-201ENST00000265245 CDCA7LQ96GN5 454 aa13.66□□□□□ -0.22
LSG1-201ENST00000265245 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
LSG1-201ENST00000265245 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
LSG1-201ENST00000265245 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
LSG1-201ENST00000265245 KIAA1210Q9ULL0 1709 aa13.65□□□□□ -0.22
LSG1-201ENST00000265245 LMTK2Q8IWU2 1503 aa13.65□□□□□ -0.22
LSG1-201ENST00000265245 ASXL1Q8IXJ9 1541 aa13.65□□□□□ -0.22
LSG1-201ENST00000265245 NPC1L1Q9UHC9 1359 aa13.65□□□□□ -0.22
LSG1-201ENST00000265245 CHGAP10645 457 aaKnown RBP13.65□□□□□ -0.23
LSG1-201ENST00000265245 REREQ9P2R6 1566 aa13.64□□□□□ -0.23
LSG1-201ENST00000265245 MSH5O43196 834 aa13.64□□□□□ -0.23
LSG1-201ENST00000265245 HECW2Q9P2P5 1572 aa13.64□□□□□ -0.23
LSG1-201ENST00000265245 GGT6Q6P531 493 aa13.63□□□□□ -0.23
LSG1-201ENST00000265245 MLH3Q9UHC1 1453 aa13.63□□□□□ -0.23
LSG1-201ENST00000265245 EXOC6Q8TAG9 804 aa13.63□□□□□ -0.23
LSG1-201ENST00000265245 PIK3C2GO75747 1445 aa13.62□□□□□ -0.23
LSG1-201ENST00000265245 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
LSG1-201ENST00000265245 KIF1BO60333 1816 aa13.61□□□□□ -0.23
LSG1-201ENST00000265245 NOS1P29475 1434 aa13.6□□□□□ -0.23
LSG1-201ENST00000265245 NPATQ14207 1427 aa13.6□□□□□ -0.23
LSG1-201ENST00000265245 SBNO2Q9Y2G9 1366 aa13.6□□□□□ -0.23
LSG1-201ENST00000265245 ERVK-7P63135 1459 aa13.6□□□□□ -0.23
LSG1-201ENST00000265245 NRXN1Q9ULB1 1477 aa13.6□□□□□ -0.23
LSG1-201ENST00000265245 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
LSG1-201ENST00000265245 FAM69CQ0P6D2 419 aa13.6□□□□□ -0.23
LSG1-201ENST00000265245 CENPJQ9HC77 1338 aaPredicted RBP13.59□□□□□ -0.23
LSG1-201ENST00000265245 DIP2CQ9Y2E4 1556 aa13.59□□□□□ -0.23
LSG1-201ENST00000265245 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
LSG1-201ENST00000265245 SIGLEC1Q9BZZ2 1709 aa13.57□□□□□ -0.24
LSG1-201ENST00000265245 RPGRIP1LQ68CZ1 1315 aa13.57□□□□□ -0.24
LSG1-201ENST00000265245 ARHGEF40Q8TER5 1519 aa13.57□□□□□ -0.24
LSG1-201ENST00000265245 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
LSG1-201ENST00000265245 MYOM1P52179 1685 aa13.57□□□□□ -0.24
LSG1-201ENST00000265245 C14orf93Q9H972 538 aaKnown RBP13.56□□□□□ -0.24
LSG1-201ENST00000265245 TRAK1Q9UPV9 953 aa13.56□□□□□ -0.24
LSG1-201ENST00000265245 PLIN1O60240 522 aa13.56□□□□□ -0.24
LSG1-201ENST00000265245 PLEKHH1Q9ULM0 1364 aa13.56□□□□□ -0.24
LSG1-201ENST00000265245 MROH2AA6NES4 1674 aa13.55□□□□□ -0.24
LSG1-201ENST00000265245 IFT172Q9UG01 1749 aa13.55□□□□□ -0.24
LSG1-201ENST00000265245 SETBP1Q9Y6X0 1596 aa13.55□□□□□ -0.24
LSG1-201ENST00000265245 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
LSG1-201ENST00000265245 RAPGEF3O95398 923 aa13.54□□□□□ -0.24
LSG1-201ENST00000265245 ANP32AP39687 249 aaKnown RBP13.54□□□□□ -0.24
LSG1-201ENST00000265245 ABCC3O15438 1527 aa13.54□□□□□ -0.24
LSG1-201ENST00000265245 ZNF521Q96K83 1311 aa13.54□□□□□ -0.24
LSG1-201ENST00000265245 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
LSG1-201ENST00000265245 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
LSG1-201ENST00000265245 NBR1Q14596 966 aa13.53□□□□□ -0.24
LSG1-201ENST00000265245 DUSP27Q5VZP5 1158 aa13.53□□□□□ -0.24
LSG1-201ENST00000265245 MYO3AQ8NEV4 1616 aa13.52□□□□□ -0.24
LSG1-201ENST00000265245 CCDC146Q8IYE0 955 aa13.52□□□□□ -0.25
LSG1-201ENST00000265245 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.52□□□□□ -0.25
LSG1-201ENST00000265245 CRBNQ96SW2 442 aa13.52□□□□□ -0.25
LSG1-201ENST00000265245 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
LSG1-201ENST00000265245 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
LSG1-201ENST00000265245 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
LSG1-201ENST00000265245 AGLP35573 1532 aa13.51□□□□□ -0.25
LSG1-201ENST00000265245 APAF1O14727 1248 aa13.51□□□□□ -0.25
LSG1-201ENST00000265245 SLFN5Q08AF3 891 aa13.5□□□□□ -0.25
LSG1-201ENST00000265245 MORC1Q86VD1 984 aa13.5□□□□□ -0.25
LSG1-201ENST00000265245 NSD3Q9BZ95 1437 aa13.49□□□□□ -0.25
LSG1-201ENST00000265245 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
LSG1-201ENST00000265245 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
LSG1-201ENST00000265245 ADGRB1O14514 1584 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms