RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 ARHGAP23Q9P227 1491 aa19.74■□□□□ 0.75
PDCD6-201ENST00000264933 KDM5AP29375 1690 aaKnown RBP19.74■□□□□ 0.75
PDCD6-201ENST00000264933 ALKQ9UM73 1620 aa19.73■□□□□ 0.75
PDCD6-201ENST00000264933 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
PDCD6-201ENST00000264933 SLIT1O75093 1534 aa19.72■□□□□ 0.75
PDCD6-201ENST00000264933 KIF1BO60333 1816 aa19.72■□□□□ 0.75
PDCD6-201ENST00000264933 STRCP1A6NGW2 1772 aa19.72■□□□□ 0.75
PDCD6-201ENST00000264933 SCAF11Q99590 1463 aaKnown RBP19.71■□□□□ 0.75
PDCD6-201ENST00000264933 LTKP29376 864 aa19.7■□□□□ 0.74
PDCD6-201ENST00000264933 ADGRB3O60242 1522 aa19.69■□□□□ 0.74
PDCD6-201ENST00000264933 LRRC7Q96NW7 1537 aa19.67■□□□□ 0.74
PDCD6-201ENST00000264933 TMEM2Q9UHN6 1383 aa19.65■□□□□ 0.74
PDCD6-201ENST00000264933 HSPA1LP34931 641 aa19.64■□□□□ 0.73
PDCD6-201ENST00000264933 PIP4K2BP78356 416 aa19.64■□□□□ 0.73
PDCD6-201ENST00000264933 TXNDC2Q86VQ3 553 aa19.64■□□□□ 0.73
PDCD6-201ENST00000264933 CCDC144AA2RUR9 1427 aa19.64■□□□□ 0.73
PDCD6-201ENST00000264933 SPATA31E1Q6ZUB1 1445 aa19.63■□□□□ 0.73
PDCD6-201ENST00000264933 TOM1O60784 492 aa19.63■□□□□ 0.73
PDCD6-201ENST00000264933 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
PDCD6-201ENST00000264933 ZFYVE9O95405 1425 aa19.59■□□□□ 0.73
PDCD6-201ENST00000264933 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
PDCD6-201ENST00000264933 CHGAP10645 457 aaKnown RBP19.59■□□□□ 0.73
PDCD6-201ENST00000264933 IFT172Q9UG01 1749 aa19.59■□□□□ 0.73
PDCD6-201ENST00000264933 PPLO60437 1756 aa19.58■□□□□ 0.73
PDCD6-201ENST00000264933 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
PDCD6-201ENST00000264933 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
PDCD6-201ENST00000264933 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
PDCD6-201ENST00000264933 SOCS7O14512 581 aa19.55■□□□□ 0.72
PDCD6-201ENST00000264933 RIMS2Q9UQ26 1411 aa19.55■□□□□ 0.72
PDCD6-201ENST00000264933 XIRP1Q702N8 1843 aaKnown RBP19.54■□□□□ 0.72
PDCD6-201ENST00000264933 MED1Q15648 1581 aaPredicted RBP19.53■□□□□ 0.72
PDCD6-201ENST00000264933 RGL3Q3MIN7 710 aa19.52■□□□□ 0.72
PDCD6-201ENST00000264933 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
PDCD6-201ENST00000264933 ZNF326Q5BKZ1 582 aaKnown RBP19.5■□□□□ 0.71
PDCD6-201ENST00000264933 NUTM2DQ5VT03 806 aaPredicted RBP19.5■□□□□ 0.71
PDCD6-201ENST00000264933 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
PDCD6-201ENST00000264933 SLC26A8Q96RN1 970 aa19.49■□□□□ 0.71
PDCD6-201ENST00000264933 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
PDCD6-201ENST00000264933 NRXN3Q9Y4C0 1643 aa19.47■□□□□ 0.71
PDCD6-201ENST00000264933 NWD1Q149M9 1564 aa19.47■□□□□ 0.71
PDCD6-201ENST00000264933 TMEM94Q12767 1356 aa19.46■□□□□ 0.71
PDCD6-201ENST00000264933 KCNA6P17658 529 aa19.46■□□□□ 0.71
PDCD6-201ENST00000264933 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.46■□□□□ 0.71
PDCD6-201ENST00000264933 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
PDCD6-201ENST00000264933 PLEKHG1Q9ULL1 1385 aa19.44■□□□□ 0.7
PDCD6-201ENST00000264933 HDGFP51858 240 aaKnown RBP19.44■□□□□ 0.7
PDCD6-201ENST00000264933 ADGRF5Q8IZF2 1346 aa19.44■□□□□ 0.7
PDCD6-201ENST00000264933 NRXN1Q9ULB1 1477 aa19.43■□□□□ 0.7
PDCD6-201ENST00000264933 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
PDCD6-201ENST00000264933 SETD1AO15047 1707 aaKnown RBP19.42■□□□□ 0.7
PDCD6-201ENST00000264933 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
PDCD6-201ENST00000264933 MYOM2P54296 1465 aa19.42■□□□□ 0.7
PDCD6-201ENST00000264933 SETBP1Q9Y6X0 1596 aa19.42■□□□□ 0.7
PDCD6-201ENST00000264933 VGFO15240 615 aaPredicted RBP19.42■□□□□ 0.7
PDCD6-201ENST00000264933 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
PDCD6-201ENST00000264933 ADAMTS13Q76LX8 1427 aa19.42■□□□□ 0.7
PDCD6-201ENST00000264933 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
PDCD6-201ENST00000264933 FAM135BQ49AJ0 1406 aa19.4■□□□□ 0.7
PDCD6-201ENST00000264933 PIK3C2GO75747 1445 aa19.38■□□□□ 0.69
PDCD6-201ENST00000264933 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
PDCD6-201ENST00000264933 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
PDCD6-201ENST00000264933 STAC3Q96MF2 364 aa19.37■□□□□ 0.69
PDCD6-201ENST00000264933 KDM2AQ9Y2K7 1162 aa19.37■□□□□ 0.69
PDCD6-201ENST00000264933 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
PDCD6-201ENST00000264933 TBX22Q9Y458 520 aa19.35■□□□□ 0.69
PDCD6-201ENST00000264933 BCANQ96GW7 911 aa19.34■□□□□ 0.69
PDCD6-201ENST00000264933 DIP2AQ14689 1571 aa19.34■□□□□ 0.69
PDCD6-201ENST00000264933 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
PDCD6-201ENST00000264933 ROBO1Q9Y6N7 1651 aa19.33■□□□□ 0.68
PDCD6-201ENST00000264933 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
PDCD6-201ENST00000264933 PRAG1Q86YV5 1406 aa19.32■□□□□ 0.68
PDCD6-201ENST00000264933 KIAA1210Q9ULL0 1709 aa19.31■□□□□ 0.68
PDCD6-201ENST00000264933 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
PDCD6-201ENST00000264933 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
PDCD6-201ENST00000264933 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
PDCD6-201ENST00000264933 METP08581 1390 aa19.31■□□□□ 0.68
PDCD6-201ENST00000264933 CFAP70Q5T0N1 1121 aa19.3■□□□□ 0.68
PDCD6-201ENST00000264933 PTPRUQ92729 1446 aa19.3■□□□□ 0.68
PDCD6-201ENST00000264933 MSH6P52701 1360 aa19.3■□□□□ 0.68
PDCD6-201ENST00000264933 LAMC1P11047 1609 aa19.29■□□□□ 0.68
PDCD6-201ENST00000264933 RGS17Q9UGC6 210 aaPredicted RBP19.29■□□□□ 0.68
PDCD6-201ENST00000264933 TRPM1Q7Z4N2 1603 aa19.28■□□□□ 0.68
PDCD6-201ENST00000264933 PIK3R4Q99570 1358 aa19.27■□□□□ 0.68
PDCD6-201ENST00000264933 ADGRB1O14514 1584 aa19.27■□□□□ 0.67
PDCD6-201ENST00000264933 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
PDCD6-201ENST00000264933 XRN1Q8IZH2 1706 aaKnown RBP19.26■□□□□ 0.67
PDCD6-201ENST00000264933 SLAIN2Q9P270 581 aa19.26■□□□□ 0.67
PDCD6-201ENST00000264933 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
PDCD6-201ENST00000264933 TMEM132EQ6IEE7 984 aa19.24■□□□□ 0.67
PDCD6-201ENST00000264933 AMOTL2Q9Y2J4 779 aa19.22■□□□□ 0.67
PDCD6-201ENST00000264933 KNDC1Q76NI1 1749 aa19.22■□□□□ 0.67
PDCD6-201ENST00000264933 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
PDCD6-201ENST00000264933 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
PDCD6-201ENST00000264933 YTHDC2Q9H6S0 1430 aaKnown RBP19.19■□□□□ 0.66
PDCD6-201ENST00000264933 COL16A1Q07092 1604 aaPredicted RBP19.19■□□□□ 0.66
PDCD6-201ENST00000264933 PHLPP1O60346 1717 aa19.18■□□□□ 0.66
PDCD6-201ENST00000264933 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
PDCD6-201ENST00000264933 TECPR2O15040 1411 aa19.17■□□□□ 0.66
PDCD6-201ENST00000264933 C19orf44Q9H6X5 657 aa19.17■□□□□ 0.66
PDCD6-201ENST00000264933 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms