RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 APAF1O14727 1248 aa23.7■■□□□ 1.39
NECTIN1-201ENST00000264025 TPM1P09493 284 aa23.7■■□□□ 1.38
NECTIN1-201ENST00000264025 EVA1CP58658 441 aa23.7■■□□□ 1.38
NECTIN1-201ENST00000264025 TPM2P07951 284 aa23.7■■□□□ 1.38
NECTIN1-201ENST00000264025 ZKSCAN1P17029 563 aaPredicted RBP23.7■■□□□ 1.38
NECTIN1-201ENST00000264025 DIAPH1O60610 1272 aaKnown RBP23.69■■□□□ 1.38
NECTIN1-201ENST00000264025 MCTP1Q6DN14 999 aa23.69■■□□□ 1.38
NECTIN1-201ENST00000264025 NGEFQ8N5V2 710 aa23.69■■□□□ 1.38
NECTIN1-201ENST00000264025 EIF2S2P20042 333 aaKnown RBP23.68■■□□□ 1.38
NECTIN1-201ENST00000264025 FOXD4L6Q3SYB3 417 aaPredicted RBP23.68■■□□□ 1.38
NECTIN1-201ENST00000264025 FOXD4L3Q6VB84 417 aaPredicted RBP23.68■■□□□ 1.38
NECTIN1-201ENST00000264025 API5Q9BZZ5 524 aaKnown RBP23.68■■□□□ 1.38
NECTIN1-201ENST00000264025 SLC4A3P48751 1232 aa23.68■■□□□ 1.38
NECTIN1-201ENST00000264025 WIZO95785 1651 aa23.67■■□□□ 1.38
NECTIN1-201ENST00000264025 AMOTL1Q8IY63 956 aa23.67■■□□□ 1.38
NECTIN1-201ENST00000264025 NOL10Q9BSC4 688 aaKnown RBP23.66■■□□□ 1.38
NECTIN1-201ENST00000264025 TRIM29Q14134 588 aa23.66■■□□□ 1.38
NECTIN1-201ENST00000264025 IFIT2P09913 472 aaKnown RBP23.65■■□□□ 1.38
NECTIN1-201ENST00000264025 ROCK1Q13464 1354 aa23.65■■□□□ 1.38
NECTIN1-201ENST00000264025 DZIP1LQ8IYY4 767 aaKnown RBP23.64■■□□□ 1.38
NECTIN1-201ENST00000264025 PTPRGP23470 1445 aa23.63■■□□□ 1.37
NECTIN1-201ENST00000264025 GSE1Q14687 1217 aa23.63■■□□□ 1.37
NECTIN1-201ENST00000264025 DDX58O95786 925 aaKnown RBP23.63■■□□□ 1.37
NECTIN1-201ENST00000264025 ANO2Q9NQ90 1003 aa23.63■■□□□ 1.37
NECTIN1-201ENST00000264025 RIPK4P57078 832 aa23.63■■□□□ 1.37
NECTIN1-201ENST00000264025 CCAR2Q8N163 923 aaKnown RBP23.62■■□□□ 1.37
NECTIN1-201ENST00000264025 CPLX1O14810 134 aa23.61■■□□□ 1.37
NECTIN1-201ENST00000264025 RNF20Q5VTR2 975 aa23.6■■□□□ 1.37
NECTIN1-201ENST00000264025 CCDC70Q6NSX1 233 aa23.59■■□□□ 1.37
NECTIN1-201ENST00000264025 APPP05067 770 aa23.59■■□□□ 1.37
NECTIN1-201ENST00000264025 CCDC47Q96A33 483 aaKnown RBP23.58■■□□□ 1.37
NECTIN1-201ENST00000264025 TRIM34Q9BYJ4 488 aa23.58■■□□□ 1.37
NECTIN1-201ENST00000264025 FKBP5Q13451 457 aaPredicted RBP23.58■■□□□ 1.37
NECTIN1-201ENST00000264025 G3BP1Q13283 466 aaKnown RBP eCLIP23.58■■□□□ 1.37
NECTIN1-201ENST00000264025 NECTIN2Q92692 538 aa23.58■■□□□ 1.36
NECTIN1-201ENST00000264025 TRDNQ13061 729 aa23.57■■□□□ 1.36
NECTIN1-201ENST00000264025 RUNDC1Q96C34 613 aa23.57■■□□□ 1.36
NECTIN1-201ENST00000264025 TCEAL9Q9UHQ7 104 aa23.57■■□□□ 1.36
NECTIN1-201ENST00000264025 ANKRD20A12PQ8NF67 263 aa23.56■■□□□ 1.36
NECTIN1-201ENST00000264025 IPO7O95373 1038 aaKnown RBP23.56■■□□□ 1.36
NECTIN1-201ENST00000264025 GPS2Q13227 327 aa23.55■■□□□ 1.36
NECTIN1-201ENST00000264025 HSP90AA2PQ14568 343 aaPredicted RBP23.55■■□□□ 1.36
NECTIN1-201ENST00000264025 MSH5O43196 834 aa23.55■■□□□ 1.36
NECTIN1-201ENST00000264025 RAD21O60216 631 aa23.55■■□□□ 1.36
NECTIN1-201ENST00000264025 CHMP5Q9NZZ3 219 aa23.55■■□□□ 1.36
NECTIN1-201ENST00000264025 RSPH6AQ9H0K4 717 aa23.54■■□□□ 1.36
NECTIN1-201ENST00000264025 HOOK1Q9UJC3 728 aaKnown RBP23.54■■□□□ 1.36
NECTIN1-201ENST00000264025 PSME1Q06323 249 aa23.54■■□□□ 1.36
NECTIN1-201ENST00000264025 VPS37DQ86XT2 251 aa23.54■■□□□ 1.36
NECTIN1-201ENST00000264025 BICD2Q8TD16 824 aa23.54■■□□□ 1.36
NECTIN1-201ENST00000264025 HSP90AB4PQ58FF6 505 aa23.53■■□□□ 1.36
NECTIN1-201ENST00000264025 PCMTD1Q96MG8 357 aaPredicted RBP23.53■■□□□ 1.36
NECTIN1-201ENST00000264025 GNAI1P63096 354 aa23.53■■□□□ 1.36
NECTIN1-201ENST00000264025 INTS3Q68E01 1043 aaKnown RBP23.53■■□□□ 1.36
NECTIN1-201ENST00000264025 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
NECTIN1-201ENST00000264025 DHX16O60231 1041 aaKnown RBP23.51■■□□□ 1.35
NECTIN1-201ENST00000264025 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.51■■□□□ 1.35
NECTIN1-201ENST00000264025 ZNF592Q92610 1267 aa23.5■■□□□ 1.35
NECTIN1-201ENST00000264025 TSPYL4Q9UJ04 414 aa23.5■■□□□ 1.35
NECTIN1-201ENST00000264025 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
NECTIN1-201ENST00000264025 NFXL1Q6ZNB6 911 aa23.5■■□□□ 1.35
NECTIN1-201ENST00000264025 ERC2O15083 957 aa23.49■■□□□ 1.35
NECTIN1-201ENST00000264025 ERICH2A1L162 156 aa23.49■■□□□ 1.35
NECTIN1-201ENST00000264025 SMC3Q9UQE7 1217 aa23.49■■□□□ 1.35
NECTIN1-201ENST00000264025 SYTL4Q96C24 671 aaPredicted RBP23.49■■□□□ 1.35
NECTIN1-201ENST00000264025 VPS37CA5D8V6 355 aaPredicted RBP23.48■■□□□ 1.35
NECTIN1-201ENST00000264025 SETQ01105 290 aaPredicted RBP23.48■■□□□ 1.35
NECTIN1-201ENST00000264025 STAC3Q96MF2 364 aa23.48■■□□□ 1.35
NECTIN1-201ENST00000264025 NUCB2P80303 420 aa23.48■■□□□ 1.35
NECTIN1-201ENST00000264025 ANO8Q9HCE9 1232 aaPredicted RBP23.47■■□□□ 1.35
NECTIN1-201ENST00000264025 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
NECTIN1-201ENST00000264025 FANCIQ9NVI1 1328 aa23.46■■□□□ 1.35
NECTIN1-201ENST00000264025 AAMPQ13685 434 aa23.46■■□□□ 1.35
NECTIN1-201ENST00000264025 ATAD2BQ9ULI0 1458 aa23.45■■□□□ 1.34
NECTIN1-201ENST00000264025 WWC1Q8IX03 1113 aa23.44■■□□□ 1.34
NECTIN1-201ENST00000264025 LNPKQ9C0E8 428 aa23.44■■□□□ 1.34
NECTIN1-201ENST00000264025 RAPGEF4Q8WZA2 1011 aa23.44■■□□□ 1.34
NECTIN1-201ENST00000264025 HOMER1Q86YM7 354 aa23.44■■□□□ 1.34
NECTIN1-201ENST00000264025 MIA2Q96PC5 1412 aa23.43■■□□□ 1.34
NECTIN1-201ENST00000264025 SASS6Q6UVJ0 657 aa23.43■■□□□ 1.34
NECTIN1-201ENST00000264025 SAFBQ15424 915 aaKnown RBP eCLIP23.43■■□□□ 1.34
NECTIN1-201ENST00000264025 HMOX1P09601 288 aa23.42■■□□□ 1.34
NECTIN1-201ENST00000264025 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
NECTIN1-201ENST00000264025 CCDC7Q96M83 1385 aa23.42■■□□□ 1.34
NECTIN1-201ENST00000264025 CCDC73Q6ZRK6 1079 aa23.42■■□□□ 1.34
NECTIN1-201ENST00000264025 C22orf23Q9BZE7 217 aa23.41■■□□□ 1.34
NECTIN1-201ENST00000264025 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
NECTIN1-201ENST00000264025 RIC3Q7Z5B4 369 aa23.41■■□□□ 1.34
NECTIN1-201ENST00000264025 FBXW7Q969H0 707 aa23.41■■□□□ 1.34
NECTIN1-201ENST00000264025 RALYLQ86SE5 291 aaKnown RBP23.4■■□□□ 1.34
NECTIN1-201ENST00000264025 KIF7Q2M1P5 1343 aa23.4■■□□□ 1.34
NECTIN1-201ENST00000264025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.4■■□□□ 1.34
NECTIN1-201ENST00000264025 NEUROD6Q96NK8 337 aa23.38■■□□□ 1.33
NECTIN1-201ENST00000264025 CDC45O75419 566 aa23.38■■□□□ 1.33
NECTIN1-201ENST00000264025 UBTFL1P0CB47 393 aaPredicted RBP23.37■■□□□ 1.33
NECTIN1-201ENST00000264025 CCDC43Q96MW1 224 aaKnown RBP23.37■■□□□ 1.33
NECTIN1-201ENST00000264025 GGNBP2Q9H3C7 697 aa23.37■■□□□ 1.33
NECTIN1-201ENST00000264025 RBM33Q96EV2 1170 aaKnown RBP23.36■■□□□ 1.33
NECTIN1-201ENST00000264025 WASHC4Q2M389 1173 aa23.36■■□□□ 1.33
NECTIN1-201ENST00000264025 CUX1P39880 1505 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms