RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 CSB-PGBD3P0DP91 1061 aa18.12■□□□□ 0.49
PPM1F-201ENST00000263212 CHMP4CQ96CF2 233 aa18.12■□□□□ 0.49
PPM1F-201ENST00000263212 SMG6Q86US8 1419 aaKnown RBP18.11■□□□□ 0.49
PPM1F-201ENST00000263212 PANK1Q8TE04 598 aa18.11■□□□□ 0.49
PPM1F-201ENST00000263212 EID1Q9Y6B2 187 aa18.11■□□□□ 0.49
PPM1F-201ENST00000263212 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
PPM1F-201ENST00000263212 TULP1O00294 542 aaPredicted RBP18.11■□□□□ 0.49
PPM1F-201ENST00000263212 EFCAB5A4FU69 1503 aa18.1■□□□□ 0.49
PPM1F-201ENST00000263212 CHMP3Q9Y3E7 222 aa18.09■□□□□ 0.49
PPM1F-201ENST00000263212 MINK1Q8N4C8 1332 aaPredicted RBP18.09■□□□□ 0.49
PPM1F-201ENST00000263212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.496e-6■□□□□ 11
PPM1F-201ENST00000263212 CFTRP13569 1480 aa18.09■□□□□ 0.49
PPM1F-201ENST00000263212 NBPF8Q3BBV2 869 aa18.09■□□□□ 0.49
PPM1F-201ENST00000263212 BACH2Q9BYV9 841 aa18.08■□□□□ 0.49
PPM1F-201ENST00000263212 MRE11P49959 708 aa18.08■□□□□ 0.49
PPM1F-201ENST00000263212 GNAI1P63096 354 aa18.08■□□□□ 0.49
PPM1F-201ENST00000263212 PDE3AQ14432 1141 aa18.08■□□□□ 0.49
PPM1F-201ENST00000263212 INTS3Q68E01 1043 aaKnown RBP18.08■□□□□ 0.49
PPM1F-201ENST00000263212 RUFY2Q8WXA3 655 aa18.08■□□□□ 0.49
PPM1F-201ENST00000263212 AKNAQ7Z591 1439 aa18.08■□□□□ 0.48
PPM1F-201ENST00000263212 LNPKQ9C0E8 428 aa18.08■□□□□ 0.48
PPM1F-201ENST00000263212 SF3A1Q15459 793 aaKnown RBP18.08■□□□□ 0.48
PPM1F-201ENST00000263212 PPP2R1AP30153 589 aa18.07■□□□□ 0.48
PPM1F-201ENST00000263212 TIAM1Q13009 1591 aa18.07■□□□□ 0.48
PPM1F-201ENST00000263212 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
PPM1F-201ENST00000263212 DIAPH3Q9NSV4 1193 aa18.06■□□□□ 0.48
PPM1F-201ENST00000263212 WDR97A6NE52 1622 aa18.06■□□□□ 0.48
PPM1F-201ENST00000263212 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
PPM1F-201ENST00000263212 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
PPM1F-201ENST00000263212 H3BQV1 296 aa18.05■□□□□ 0.48
PPM1F-201ENST00000263212 IFFO2Q5TF58 517 aa18.05■□□□□ 0.48
PPM1F-201ENST00000263212 GOLGA6L19H0YKK7 550 aa18.05■□□□□ 0.48
PPM1F-201ENST00000263212 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
PPM1F-201ENST00000263212 EHBP1L1Q8N3D4 1523 aa18.05■□□□□ 0.48
PPM1F-201ENST00000263212 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.05■□□□□ 0.48
PPM1F-201ENST00000263212 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
PPM1F-201ENST00000263212 ZKSCAN1P17029 563 aaPredicted RBP18.04■□□□□ 0.48
PPM1F-201ENST00000263212 FAM184AQ8NB25 1140 aa18.04■□□□□ 0.48
PPM1F-201ENST00000263212 TOP2BQ02880 1626 aa18.04■□□□□ 0.48
PPM1F-201ENST00000263212 FOXD4L6Q3SYB3 417 aaPredicted RBP18.03■□□□□ 0.48
PPM1F-201ENST00000263212 FOXD4L3Q6VB84 417 aaPredicted RBP18.03■□□□□ 0.48
PPM1F-201ENST00000263212 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
PPM1F-201ENST00000263212 BECN2A8MW95 431 aa18.03■□□□□ 0.48
PPM1F-201ENST00000263212 CDC45O75419 566 aa18.02■□□□□ 0.48
PPM1F-201ENST00000263212 NUTM2FA1L443 756 aa18.02■□□□□ 0.48
PPM1F-201ENST00000263212 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.48
PPM1F-201ENST00000263212 ANO2Q9NQ90 1003 aa18.01■□□□□ 0.47
PPM1F-201ENST00000263212 MTHFSP49914 203 aa18■□□□□ 0.47
PPM1F-201ENST00000263212 TRAK2O60296 914 aa18■□□□□ 0.47
PPM1F-201ENST00000263212 CCDC184Q52MB2 194 aa18■□□□□ 0.47
PPM1F-201ENST00000263212 FRAT2O75474 233 aaPredicted RBP17.99■□□□□ 0.47
PPM1F-201ENST00000263212 TEFQ10587 303 aa17.99■□□□□ 0.47
PPM1F-201ENST00000263212 GOLGA6L1Q8N7Z2 621 aa17.99■□□□□ 0.47
PPM1F-201ENST00000263212 PDZRN3Q9UPQ7 1066 aa17.99■□□□□ 0.47
PPM1F-201ENST00000263212 NINLQ9Y2I6 1382 aa17.99■□□□□ 0.47
PPM1F-201ENST00000263212 SCAPERQ9BY12 1400 aa17.99■□□□□ 0.47
PPM1F-201ENST00000263212 TNNT3P45378 269 aaPredicted RBP17.98■□□□□ 0.47
PPM1F-201ENST00000263212 MCTP1Q6DN14 999 aa17.98■□□□□ 0.47
PPM1F-201ENST00000263212 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
PPM1F-201ENST00000263212 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
PPM1F-201ENST00000263212 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
PPM1F-201ENST00000263212 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
PPM1F-201ENST00000263212 C9orf78Q9NZ63 289 aaPredicted RBP17.96■□□□□ 0.47
PPM1F-201ENST00000263212 TPM3P06753 285 aa17.96■□□□□ 0.47
PPM1F-201ENST00000263212 ISY1Q9ULR0 285 aaKnown RBP17.96■□□□□ 0.47
PPM1F-201ENST00000263212 NASPP49321 788 aaPredicted RBP17.96■□□□□ 0.47
PPM1F-201ENST00000263212 HSP90AB4PQ58FF6 505 aa17.96■□□□□ 0.47
PPM1F-201ENST00000263212 RNF20Q5VTR2 975 aa17.96■□□□□ 0.47
PPM1F-201ENST00000263212 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
PPM1F-201ENST00000263212 LRRFIP1Q32MZ4 808 aaKnown RBP17.95■□□□□ 0.46
PPM1F-201ENST00000263212 C1orf141Q5JVX7 400 aa17.95■□□□□ 0.46
PPM1F-201ENST00000263212 IFIT2P09913 472 aaKnown RBP17.95■□□□□ 0.46
PPM1F-201ENST00000263212 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
PPM1F-201ENST00000263212 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.461e-6■■■■■ 28.7
PPM1F-201ENST00000263212 FAM13BQ9NYF5 915 aa17.94■□□□□ 0.46
PPM1F-201ENST00000263212 NAIPQ13075 1403 aa17.94■□□□□ 0.46
PPM1F-201ENST00000263212 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
PPM1F-201ENST00000263212 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
PPM1F-201ENST00000263212 CFAP70Q5T0N1 1121 aa17.93■□□□□ 0.46
PPM1F-201ENST00000263212 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
PPM1F-201ENST00000263212 BRPF3Q9ULD4 1205 aa17.93■□□□□ 0.46
PPM1F-201ENST00000263212 RASSF8Q8NHQ8 419 aa17.93■□□□□ 0.46
PPM1F-201ENST00000263212 CT47B1P0C2W7 299 aaPredicted RBP17.93■□□□□ 0.46
PPM1F-201ENST00000263212 C9orf84Q5VXU9 1444 aa17.92■□□□□ 0.46
PPM1F-201ENST00000263212 BCAR3O75815 825 aa17.92■□□□□ 0.46
PPM1F-201ENST00000263212 HMOX1P09601 288 aa17.92■□□□□ 0.46
PPM1F-201ENST00000263212 GCC1Q96CN9 775 aa17.92■□□□□ 0.46
PPM1F-201ENST00000263212 TOMM22Q9NS69 142 aa17.92■□□□□ 0.46
PPM1F-201ENST00000263212 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
PPM1F-201ENST00000263212 EXOSC9Q06265 439 aaKnown RBP17.92■□□□□ 0.46
PPM1F-201ENST00000263212 MBD3O95983 291 aa17.91■□□□□ 0.46
PPM1F-201ENST00000263212 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.91■□□□□ 0.46
PPM1F-201ENST00000263212 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
PPM1F-201ENST00000263212 RABEP1Q15276 862 aa17.91■□□□□ 0.46
PPM1F-201ENST00000263212 WDR63Q8IWG1 891 aa17.91■□□□□ 0.46
PPM1F-201ENST00000263212 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
PPM1F-201ENST00000263212 ERC2O15083 957 aa17.9■□□□□ 0.46
PPM1F-201ENST00000263212 VPS37CA5D8V6 355 aaPredicted RBP17.9■□□□□ 0.46
PPM1F-201ENST00000263212 CCDC39Q9UFE4 941 aa17.9■□□□□ 0.46
PPM1F-201ENST00000263212 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms