RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 TMEM2Q9UHN6 1383 aa24.52■■□□□ 1.52
CCDC94-201ENST00000262962 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
CCDC94-201ENST00000262962 ZFYVE9O95405 1425 aa24.5■■□□□ 1.51
CCDC94-201ENST00000262962 RIMS2Q9UQ26 1411 aa24.5■■□□□ 1.51
CCDC94-201ENST00000262962 TIMELESSQ9UNS1 1208 aa24.47■■□□□ 1.51
CCDC94-201ENST00000262962 POLR1AO95602 1720 aaPredicted RBP24.47■■□□□ 1.51
CCDC94-201ENST00000262962 HDGFP51858 240 aaKnown RBP24.46■■□□□ 1.51
CCDC94-201ENST00000262962 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.45■■□□□ 1.51
CCDC94-201ENST00000262962 L3MBTL2Q969R5 705 aa24.45■■□□□ 1.51
CCDC94-201ENST00000262962 MYOM2P54296 1465 aa24.44■■□□□ 1.5
CCDC94-201ENST00000262962 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
CCDC94-201ENST00000262962 STAC3Q96MF2 364 aa24.44■■□□□ 1.5
CCDC94-201ENST00000262962 EID1Q9Y6B2 187 aa24.44■■□□□ 1.5
CCDC94-201ENST00000262962 SCAF11Q99590 1463 aaKnown RBP24.42■■□□□ 1.5
CCDC94-201ENST00000262962 VGFO15240 615 aaPredicted RBP24.42■■□□□ 1.5
CCDC94-201ENST00000262962 ANKLE2Q86XL3 938 aa24.41■■□□□ 1.5
CCDC94-201ENST00000262962 TXNDC2Q86VQ3 553 aa24.4■■□□□ 1.5
CCDC94-201ENST00000262962 PPP1R15AO75807 674 aaPredicted RBP24.39■■□□□ 1.5
CCDC94-201ENST00000262962 LTKP29376 864 aa24.39■■□□□ 1.5
CCDC94-201ENST00000262962 NRXN1Q9ULB1 1477 aa24.39■■□□□ 1.49
CCDC94-201ENST00000262962 NUTM2DQ5VT03 806 aaPredicted RBP24.38■■□□□ 1.49
CCDC94-201ENST00000262962 STRCQ7RTU9 1775 aa24.38■■□□□ 1.49
CCDC94-201ENST00000262962 NCKAP5LQ9HCH0 1330 aa24.37■■□□□ 1.49
CCDC94-201ENST00000262962 KDM2AQ9Y2K7 1162 aa24.37■■□□□ 1.49
CCDC94-201ENST00000262962 PLEKHG1Q9ULL1 1385 aa24.36■■□□□ 1.49
CCDC94-201ENST00000262962 MED14O60244 1454 aa24.35■■□□□ 1.49
CCDC94-201ENST00000262962 ADGRF5Q8IZF2 1346 aa24.35■■□□□ 1.49
CCDC94-201ENST00000262962 PIK3C2GO75747 1445 aa24.34■■□□□ 1.49
CCDC94-201ENST00000262962 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
CCDC94-201ENST00000262962 IQGAP1P46940 1657 aa24.33■■□□□ 1.49
CCDC94-201ENST00000262962 DMRT2Q9Y5R5 561 aa24.33■■□□□ 1.49
CCDC94-201ENST00000262962 NRXN3Q9Y4C0 1643 aa24.33■■□□□ 1.48
CCDC94-201ENST00000262962 PRAG1Q86YV5 1406 aa24.32■■□□□ 1.48
CCDC94-201ENST00000262962 LAMC1P11047 1609 aa24.31■■□□□ 1.48
CCDC94-201ENST00000262962 NPHP4O75161 1426 aaPredicted RBP24.3■■□□□ 1.48
CCDC94-201ENST00000262962 KIAA1210Q9ULL0 1709 aa24.3■■□□□ 1.48
CCDC94-201ENST00000262962 DIP2AQ14689 1571 aa24.28■■□□□ 1.48
CCDC94-201ENST00000262962 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
CCDC94-201ENST00000262962 ALKQ9UM73 1620 aa24.27■■□□□ 1.48
CCDC94-201ENST00000262962 ZEB1P37275 1124 aaPredicted RBP24.27■■□□□ 1.48
CCDC94-201ENST00000262962 BCANQ96GW7 911 aa24.27■■□□□ 1.48
CCDC94-201ENST00000262962 TRPM1Q7Z4N2 1603 aa24.26■■□□□ 1.47
CCDC94-201ENST00000262962 ADAMTS13Q76LX8 1427 aa24.25■■□□□ 1.47
CCDC94-201ENST00000262962 NBPF8Q3BBV2 869 aa24.24■■□□□ 1.47
CCDC94-201ENST00000262962 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
CCDC94-201ENST00000262962 C14orf93Q9H972 538 aaKnown RBP24.22■■□□□ 1.47
CCDC94-201ENST00000262962 CFAP70Q5T0N1 1121 aa24.2■■□□□ 1.46
CCDC94-201ENST00000262962 TBX22Q9Y458 520 aa24.2■■□□□ 1.46
CCDC94-201ENST00000262962 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
CCDC94-201ENST00000262962 RALGAPBQ86X10 1494 aa24.19■■□□□ 1.46
CCDC94-201ENST00000262962 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
CCDC94-201ENST00000262962 ASXL1Q8IXJ9 1541 aa24.16■■□□□ 1.46
CCDC94-201ENST00000262962 CHD2O14647 1828 aaKnown RBP24.15■■□□□ 1.46
CCDC94-201ENST00000262962 METP08581 1390 aa24.14■■□□□ 1.46
CCDC94-201ENST00000262962 PIK3R4Q99570 1358 aa24.14■■□□□ 1.46
CCDC94-201ENST00000262962 ROCK2O75116 1388 aaKnown RBP24.14■■□□□ 1.45
CCDC94-201ENST00000262962 GPRASP1Q5JY77 1395 aa24.13■■□□□ 1.45
CCDC94-201ENST00000262962 NBPF1Q3BBV0 1214 aa24.12■■□□□ 1.45
CCDC94-201ENST00000262962 KNDC1Q76NI1 1749 aa24.1■■□□□ 1.45
CCDC94-201ENST00000262962 TMEM132EQ6IEE7 984 aa24.1■■□□□ 1.45
CCDC94-201ENST00000262962 NWD1Q149M9 1564 aa24.09■■□□□ 1.45
CCDC94-201ENST00000262962 XRN1Q8IZH2 1706 aaKnown RBP24.09■■□□□ 1.45
CCDC94-201ENST00000262962 ZNF335Q9H4Z2 1342 aaPredicted RBP24.08■■□□□ 1.45
CCDC94-201ENST00000262962 YTHDC2Q9H6S0 1430 aaKnown RBP24.08■■□□□ 1.45
CCDC94-201ENST00000262962 PTPRUQ92729 1446 aa24.07■■□□□ 1.44
CCDC94-201ENST00000262962 LRPPRCP42704 1394 aaKnown RBP24.07■■□□□ 1.44
CCDC94-201ENST00000262962 CARD11Q9BXL7 1154 aa24.06■■□□□ 1.44
CCDC94-201ENST00000262962 STRCP1A6NGW2 1772 aa24.05■■□□□ 1.44
CCDC94-201ENST00000262962 ABCC11Q96J66 1382 aa24.04■■□□□ 1.44
CCDC94-201ENST00000262962 TECPR2O15040 1411 aa24.04■■□□□ 1.44
CCDC94-201ENST00000262962 ARHGEF28Q8N1W1 1705 aaKnown RBP24.04■■□□□ 1.44
CCDC94-201ENST00000262962 CPS1P31327 1500 aa24.04■■□□□ 1.44
CCDC94-201ENST00000262962 KCNA6P17658 529 aa24.03■■□□□ 1.44
CCDC94-201ENST00000262962 AMOTL2Q9Y2J4 779 aa24.03■■□□□ 1.44
CCDC94-201ENST00000262962 DLC1Q96QB1 1528 aa24.03■■□□□ 1.44
CCDC94-201ENST00000262962 STK26Q9P289 416 aa24.01■■□□□ 1.43
CCDC94-201ENST00000262962 PTCH1Q13635 1447 aa24.01■■□□□ 1.43
CCDC94-201ENST00000262962 NKTRP30414 1462 aaKnown RBP24.01■■□□□ 1.43
CCDC94-201ENST00000262962 TRAK1Q9UPV9 953 aa23.99■■□□□ 1.43
CCDC94-201ENST00000262962 EIF3AQ14152 1382 aaKnown RBP23.98■■□□□ 1.43
CCDC94-201ENST00000262962 SIRT1Q96EB6 747 aa23.97■■□□□ 1.43
CCDC94-201ENST00000262962 FAM135BQ49AJ0 1406 aa23.97■■□□□ 1.43
CCDC94-201ENST00000262962 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
CCDC94-201ENST00000262962 USP47Q96K76 1375 aa23.95■■□□□ 1.42
CCDC94-201ENST00000262962 ROBO2Q9HCK4 1378 aa23.95■■□□□ 1.42
CCDC94-201ENST00000262962 CERKQ8TCT0 537 aa23.94■■□□□ 1.42
CCDC94-201ENST00000262962 QRICH2Q9H0J4 1663 aa23.92■■□□□ 1.42
CCDC94-201ENST00000262962 EIF4G2P78344 907 aaKnown RBP eCLIP23.91■■□□□ 1.42
CCDC94-201ENST00000262962 PRAM1Q96QH2 718 aa23.91■■□□□ 1.42
CCDC94-201ENST00000262962 POGKQ9P215 609 aa23.9■■□□□ 1.42
CCDC94-201ENST00000262962 CENPJQ9HC77 1338 aaPredicted RBP23.89■■□□□ 1.42
CCDC94-201ENST00000262962 XIRP1Q702N8 1843 aaKnown RBP23.89■■□□□ 1.42
CCDC94-201ENST00000262962 PROSER2Q86WR7 435 aaPredicted RBP23.89■■□□□ 1.41
CCDC94-201ENST00000262962 WAPLQ7Z5K2 1190 aa23.88■■□□□ 1.41
CCDC94-201ENST00000262962 LRRC7Q96NW7 1537 aa23.88■■□□□ 1.41
CCDC94-201ENST00000262962 PLEKHH1Q9ULM0 1364 aa23.88■■□□□ 1.41
CCDC94-201ENST00000262962 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.87■■□□□ 1.41
CCDC94-201ENST00000262962 NCOA3Q9Y6Q9 1424 aa23.86■■□□□ 1.41
CCDC94-201ENST00000262962 NALCNQ8IZF0 1738 aa23.85■■□□□ 1.41
CCDC94-201ENST00000262962 ST20-MTHFSA0A0A6YYL1 179 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms