RNA–Protein interactions for RNA: ENST00000262942.9

ARPC1A-201, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1A, Length 1,565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-201ENST00000262942 RIMS2Q9UQ26 1411 aa20.55■□□□□ 0.88
ARPC1A-201ENST00000262942 MYOM2P54296 1465 aa20.54■□□□□ 0.88
ARPC1A-201ENST00000262942 STAG3Q9UJ98 1225 aa20.54■□□□□ 0.88
ARPC1A-201ENST00000262942 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
ARPC1A-201ENST00000262942 ZNF326Q5BKZ1 582 aaKnown RBP20.51■□□□□ 0.87
ARPC1A-201ENST00000262942 SCAF11Q99590 1463 aaKnown RBP20.5■□□□□ 0.87
ARPC1A-201ENST00000262942 NRXN1Q9ULB1 1477 aa20.5■□□□□ 0.87
ARPC1A-201ENST00000262942 HSPA2P54652 639 aa20.5■□□□□ 0.87
ARPC1A-201ENST00000262942 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
ARPC1A-201ENST00000262942 TRPM1Q7Z4N2 1603 aa20.5■□□□□ 0.87
ARPC1A-201ENST00000262942 KIAA1210Q9ULL0 1709 aa20.49■□□□□ 0.87
ARPC1A-201ENST00000262942 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
ARPC1A-201ENST00000262942 SETBP1Q9Y6X0 1596 aa20.49■□□□□ 0.87
ARPC1A-201ENST00000262942 LAMC1P11047 1609 aa20.48■□□□□ 0.87
ARPC1A-201ENST00000262942 L3MBTL2Q969R5 705 aa20.48■□□□□ 0.87
ARPC1A-201ENST00000262942 LTKP29376 864 aa20.46■□□□□ 0.87
ARPC1A-201ENST00000262942 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
ARPC1A-201ENST00000262942 RPGRIP1LQ68CZ1 1315 aa20.46■□□□□ 0.87
ARPC1A-201ENST00000262942 MED14O60244 1454 aa20.45■□□□□ 0.86
ARPC1A-201ENST00000262942 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
ARPC1A-201ENST00000262942 ADGRF5Q8IZF2 1346 aa20.43■□□□□ 0.86
ARPC1A-201ENST00000262942 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
ARPC1A-201ENST00000262942 DCAF11Q8TEB1 546 aa20.43■□□□□ 0.86
ARPC1A-201ENST00000262942 ALKQ9UM73 1620 aa20.43■□□□□ 0.86
ARPC1A-201ENST00000262942 ASXL1Q8IXJ9 1541 aa20.43■□□□□ 0.86
ARPC1A-201ENST00000262942 PRAG1Q86YV5 1406 aa20.43■□□□□ 0.86
ARPC1A-201ENST00000262942 PLEKHG1Q9ULL1 1385 aa20.42■□□□□ 0.86
ARPC1A-201ENST00000262942 DIP2AQ14689 1571 aa20.41■□□□□ 0.86
ARPC1A-201ENST00000262942 CHD2O14647 1828 aaKnown RBP20.41■□□□□ 0.86
ARPC1A-201ENST00000262942 NCKAP5LQ9HCH0 1330 aa20.4■□□□□ 0.86
ARPC1A-201ENST00000262942 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
ARPC1A-201ENST00000262942 ADAMTS13Q76LX8 1427 aa20.4■□□□□ 0.86
ARPC1A-201ENST00000262942 STRCP1A6NGW2 1772 aa20.39■□□□□ 0.86
ARPC1A-201ENST00000262942 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.39■□□□□ 0.85
ARPC1A-201ENST00000262942 KDM2AQ9Y2K7 1162 aa20.39■□□□□ 0.85
ARPC1A-201ENST00000262942 NPHP4O75161 1426 aaPredicted RBP20.39■□□□□ 0.85
ARPC1A-201ENST00000262942 ANKLE2Q86XL3 938 aa20.38■□□□□ 0.85
ARPC1A-201ENST00000262942 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
ARPC1A-201ENST00000262942 EID1Q9Y6B2 187 aa20.38■□□□□ 0.85
ARPC1A-201ENST00000262942 KNDC1Q76NI1 1749 aa20.37■□□□□ 0.85
ARPC1A-201ENST00000262942 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
ARPC1A-201ENST00000262942 VGFO15240 615 aaPredicted RBP20.36■□□□□ 0.85
ARPC1A-201ENST00000262942 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
ARPC1A-201ENST00000262942 ADGRB1O14514 1584 aa20.35■□□□□ 0.85
ARPC1A-201ENST00000262942 NBPF8Q3BBV2 869 aa20.35■□□□□ 0.85
ARPC1A-201ENST00000262942 XRN1Q8IZH2 1706 aaKnown RBP20.34■□□□□ 0.85
ARPC1A-201ENST00000262942 ARHGEF28Q8N1W1 1705 aaKnown RBP20.34■□□□□ 0.85
ARPC1A-201ENST00000262942 HDGFP51858 240 aaKnown RBP20.34■□□□□ 0.85
ARPC1A-201ENST00000262942 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
ARPC1A-201ENST00000262942 STAC3Q96MF2 364 aa20.33■□□□□ 0.84
ARPC1A-201ENST00000262942 NWD1Q149M9 1564 aa20.32■□□□□ 0.84
ARPC1A-201ENST00000262942 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
ARPC1A-201ENST00000262942 XIRP1Q702N8 1843 aaKnown RBP20.29■□□□□ 0.84
ARPC1A-201ENST00000262942 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.84
ARPC1A-201ENST00000262942 C14orf93Q9H972 538 aaKnown RBP20.27■□□□□ 0.84
ARPC1A-201ENST00000262942 METP08581 1390 aa20.27■□□□□ 0.84
ARPC1A-201ENST00000262942 PTPRUQ92729 1446 aa20.27■□□□□ 0.83
ARPC1A-201ENST00000262942 CPS1P31327 1500 aa20.25■□□□□ 0.83
ARPC1A-201ENST00000262942 BCANQ96GW7 911 aa20.24■□□□□ 0.83
ARPC1A-201ENST00000262942 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
ARPC1A-201ENST00000262942 NBPF1Q3BBV0 1214 aa20.23■□□□□ 0.83
ARPC1A-201ENST00000262942 TBX22Q9Y458 520 aa20.23■□□□□ 0.83
ARPC1A-201ENST00000262942 QRICH2Q9H0J4 1663 aa20.22■□□□□ 0.83
ARPC1A-201ENST00000262942 YTHDC2Q9H6S0 1430 aaKnown RBP20.21■□□□□ 0.83
ARPC1A-201ENST00000262942 TMEM132EQ6IEE7 984 aa20.21■□□□□ 0.83
ARPC1A-201ENST00000262942 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
ARPC1A-201ENST00000262942 PIK3R4Q99570 1358 aa20.2■□□□□ 0.82
ARPC1A-201ENST00000262942 DLC1Q96QB1 1528 aa20.2■□□□□ 0.82
ARPC1A-201ENST00000262942 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
ARPC1A-201ENST00000262942 TECPR2O15040 1411 aa20.18■□□□□ 0.82
ARPC1A-201ENST00000262942 ZEB1P37275 1124 aaPredicted RBP20.17■□□□□ 0.82
ARPC1A-201ENST00000262942 LRPPRCP42704 1394 aaKnown RBP20.17■□□□□ 0.82
ARPC1A-201ENST00000262942 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
ARPC1A-201ENST00000262942 LTBP4Q8N2S1 1624 aa20.16■□□□□ 0.82
ARPC1A-201ENST00000262942 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
ARPC1A-201ENST00000262942 NKTRP30414 1462 aaKnown RBP20.15■□□□□ 0.82
ARPC1A-201ENST00000262942 PTCH1Q13635 1447 aa20.14■□□□□ 0.82
ARPC1A-201ENST00000262942 ZNF335Q9H4Z2 1342 aaPredicted RBP20.13■□□□□ 0.81
ARPC1A-201ENST00000262942 ABCC11Q96J66 1382 aa20.12■□□□□ 0.81
ARPC1A-201ENST00000262942 ROBO2Q9HCK4 1378 aa20.11■□□□□ 0.81
ARPC1A-201ENST00000262942 AMOTL2Q9Y2J4 779 aa20.11■□□□□ 0.81
ARPC1A-201ENST00000262942 KCNA6P17658 529 aa20.1■□□□□ 0.81
ARPC1A-201ENST00000262942 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
ARPC1A-201ENST00000262942 STK26Q9P289 416 aa20.1■□□□□ 0.81
ARPC1A-201ENST00000262942 PLEKHH1Q9ULM0 1364 aa20.09■□□□□ 0.81
ARPC1A-201ENST00000262942 ADGRB2O60241 1585 aa20.09■□□□□ 0.81
ARPC1A-201ENST00000262942 TRAK1Q9UPV9 953 aa20.08■□□□□ 0.81
ARPC1A-201ENST00000262942 LRRC7Q96NW7 1537 aa20.08■□□□□ 0.81
ARPC1A-201ENST00000262942 FAM135BQ49AJ0 1406 aa20.08■□□□□ 0.8
ARPC1A-201ENST00000262942 USP47Q96K76 1375 aa20.07■□□□□ 0.8
ARPC1A-201ENST00000262942 RGPD8O14715 1765 aaPredicted RBP20.07■□□□□ 0.8
ARPC1A-201ENST00000262942 FMN2Q9NZ56 1722 aa20.05■□□□□ 0.8
ARPC1A-201ENST00000262942 CDC42BPGQ6DT37 1551 aa20.02■□□□□ 0.8
ARPC1A-201ENST00000262942 TULP4Q9NRJ4 1543 aa20.02■□□□□ 0.8
ARPC1A-201ENST00000262942 EIF3AQ14152 1382 aaKnown RBP20.02■□□□□ 0.8
ARPC1A-201ENST00000262942 WAPLQ7Z5K2 1190 aa20.02■□□□□ 0.8
ARPC1A-201ENST00000262942 SIRT1Q96EB6 747 aa20.01■□□□□ 0.79
ARPC1A-201ENST00000262942 PRAM1Q96QH2 718 aa20.01■□□□□ 0.79
ARPC1A-201ENST00000262942 USP32Q8NFA0 1604 aa20■□□□□ 0.79
ARPC1A-201ENST00000262942 RBM33Q96EV2 1170 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms