RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 LMTK3Q96Q04 1460 aa35.12■■■■□ 3.21
SCN1B-201ENST00000262631 ZFYVE9O95405 1425 aa35.12■■■■□ 3.21
SCN1B-201ENST00000262631 RPGRIP1LQ68CZ1 1315 aa35.11■■■■□ 3.21
SCN1B-201ENST00000262631 RIMS2Q9UQ26 1411 aa35.11■■■■□ 3.21
SCN1B-201ENST00000262631 IFT172Q9UG01 1749 aa35.08■■■■□ 3.21
SCN1B-201ENST00000262631 SLIT1O75093 1534 aa35.08■■■■□ 3.21
SCN1B-201ENST00000262631 ARHGAP23Q9P227 1491 aa35.08■■■■□ 3.21
SCN1B-201ENST00000262631 PPLO60437 1756 aa35.06■■■■□ 3.2
SCN1B-201ENST00000262631 ADGRF5Q8IZF2 1346 aa35.05■■■■□ 3.2
SCN1B-201ENST00000262631 LTKP29376 864 aa35.05■■■■□ 3.2
SCN1B-201ENST00000262631 HSPA2P54652 639 aa35.04■■■■□ 3.2
SCN1B-201ENST00000262631 PPP1R15AO75807 674 aaPredicted RBP35.03■■■■□ 3.2
SCN1B-201ENST00000262631 MYOM2P54296 1465 aa35.02■■■■□ 3.2
SCN1B-201ENST00000262631 TXNDC2Q86VQ3 553 aa35.01■■■■□ 3.19
SCN1B-201ENST00000262631 VGFO15240 615 aaPredicted RBP35■■■■□ 3.19
SCN1B-201ENST00000262631 ZEB1P37275 1124 aaPredicted RBP34.98■■■■□ 3.19
SCN1B-201ENST00000262631 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.98■■■■□ 3.19
SCN1B-201ENST00000262631 SENP3Q9H4L4 574 aaPredicted RBP34.98■■■■□ 3.19
SCN1B-201ENST00000262631 NBPF8Q3BBV2 869 aa34.98■■■■□ 3.19
SCN1B-201ENST00000262631 STAC3Q96MF2 364 aa34.98■■■■□ 3.19
SCN1B-201ENST00000262631 NRXN1Q9ULB1 1477 aa34.97■■■■□ 3.19
SCN1B-201ENST00000262631 EID1Q9Y6B2 187 aa34.97■■■■□ 3.19
SCN1B-201ENST00000262631 PRAG1Q86YV5 1406 aa34.97■■■■□ 3.19
SCN1B-201ENST00000262631 HDGFP51858 240 aaKnown RBP34.96■■■■□ 3.19
SCN1B-201ENST00000262631 SCAF11Q99590 1463 aaKnown RBP34.95■■■■□ 3.18
SCN1B-201ENST00000262631 ANKLE2Q86XL3 938 aa34.93■■■■□ 3.18
SCN1B-201ENST00000262631 PIK3C2GO75747 1445 aa34.93■■■■□ 3.18
SCN1B-201ENST00000262631 NCKAP5LQ9HCH0 1330 aa34.89■■■■□ 3.18
SCN1B-201ENST00000262631 PLEKHG1Q9ULL1 1385 aa34.88■■■■□ 3.17
SCN1B-201ENST00000262631 CFAP70Q5T0N1 1121 aa34.84■■■■□ 3.17
SCN1B-201ENST00000262631 NRXN3Q9Y4C0 1643 aa34.83■■■■□ 3.17
SCN1B-201ENST00000262631 BCANQ96GW7 911 aa34.82■■■■□ 3.16
SCN1B-201ENST00000262631 SETBP1Q9Y6X0 1596 aa34.82■■■■□ 3.16
SCN1B-201ENST00000262631 POLR1AO95602 1720 aaPredicted RBP34.8■■■■□ 3.16
SCN1B-201ENST00000262631 C14orf93Q9H972 538 aaKnown RBP34.8■■■■□ 3.16
SCN1B-201ENST00000262631 MED14O60244 1454 aa34.79■■■■□ 3.16
SCN1B-201ENST00000262631 ADAMTS13Q76LX8 1427 aa34.79■■■■□ 3.16
SCN1B-201ENST00000262631 NBPF1Q3BBV0 1214 aa34.79■■■■□ 3.16
SCN1B-201ENST00000262631 IQGAP1P46940 1657 aa34.78■■■■□ 3.16
SCN1B-201ENST00000262631 NPHP4O75161 1426 aaPredicted RBP34.78■■■■□ 3.16
SCN1B-201ENST00000262631 TRPM1Q7Z4N2 1603 aa34.77■■■■□ 3.16
SCN1B-201ENST00000262631 SLC26A8Q96RN1 970 aa34.77■■■■□ 3.16
SCN1B-201ENST00000262631 ALKQ9UM73 1620 aa34.77■■■■□ 3.16
SCN1B-201ENST00000262631 STRCQ7RTU9 1775 aa34.76■■■■□ 3.15
SCN1B-201ENST00000262631 RALGAPBQ86X10 1494 aa34.75■■■■□ 3.15
SCN1B-201ENST00000262631 ROCK2O75116 1388 aaKnown RBP34.71■■■■□ 3.15
SCN1B-201ENST00000262631 TMEM132EQ6IEE7 984 aa34.71■■■■□ 3.15
SCN1B-201ENST00000262631 ASXL1Q8IXJ9 1541 aa34.7■■■■□ 3.14
SCN1B-201ENST00000262631 SETD1AO15047 1707 aaKnown RBP34.7■■■■□ 3.14
SCN1B-201ENST00000262631 KIAA1210Q9ULL0 1709 aa34.7■■■■□ 3.14
SCN1B-201ENST00000262631 METP08581 1390 aa34.69■■■■□ 3.14
SCN1B-201ENST00000262631 LAMC1P11047 1609 aa34.69■■■■□ 3.14
SCN1B-201ENST00000262631 ADGRB1O14514 1584 aa34.68■■■■□ 3.14
SCN1B-201ENST00000262631 TBX22Q9Y458 520 aa34.67■■■■□ 3.14
SCN1B-201ENST00000262631 GPRASP1Q5JY77 1395 aa34.66■■■■□ 3.14
SCN1B-201ENST00000262631 DIP2AQ14689 1571 aa34.63■■■■□ 3.13
SCN1B-201ENST00000262631 CARD11Q9BXL7 1154 aa34.63■■■■□ 3.13
SCN1B-201ENST00000262631 PTPRUQ92729 1446 aa34.56■■■■□ 3.12
SCN1B-201ENST00000262631 STK26Q9P289 416 aa34.56■■■■□ 3.12
SCN1B-201ENST00000262631 YTHDC2Q9H6S0 1430 aaKnown RBP34.56■■■■□ 3.12
SCN1B-201ENST00000262631 LRPPRCP42704 1394 aaKnown RBP34.52■■■■□ 3.12
SCN1B-201ENST00000262631 TRAK1Q9UPV9 953 aa34.52■■■■□ 3.12
SCN1B-201ENST00000262631 PIK3R4Q99570 1358 aa34.51■■■■□ 3.11
SCN1B-201ENST00000262631 DMRT2Q9Y5R5 561 aa34.5■■■■□ 3.11
SCN1B-201ENST00000262631 USP47Q96K76 1375 aa34.49■■■■□ 3.11
SCN1B-201ENST00000262631 AMOTL2Q9Y2J4 779 aa34.48■■■■□ 3.11
SCN1B-201ENST00000262631 ABCC11Q96J66 1382 aa34.47■■■■□ 3.11
SCN1B-201ENST00000262631 KCNA6P17658 529 aa34.44■■■■□ 3.1
SCN1B-201ENST00000262631 TECPR2O15040 1411 aa34.43■■■■□ 3.1
SCN1B-201ENST00000262631 CHD2O14647 1828 aaKnown RBP34.42■■■■□ 3.1
SCN1B-201ENST00000262631 XRN1Q8IZH2 1706 aaKnown RBP34.42■■■■□ 3.1
SCN1B-201ENST00000262631 ROBO2Q9HCK4 1378 aa34.42■■■■□ 3.1
SCN1B-201ENST00000262631 EIF4G2P78344 907 aaKnown RBP eCLIP34.41■■■■□ 3.1
SCN1B-201ENST00000262631 HSPA5P11021 654 aaKnown RBP34.41■■■■□ 3.1
SCN1B-201ENST00000262631 HIRIP3Q9BW71 556 aaPredicted RBP34.4■■■■□ 3.1
SCN1B-201ENST00000262631 NWD1Q149M9 1564 aa34.38■■■■□ 3.09
SCN1B-201ENST00000262631 ST20-MTHFSA0A0A6YYL1 179 aa34.38■■■■□ 3.09
SCN1B-201ENST00000262631 ZNF335Q9H4Z2 1342 aaPredicted RBP34.38■■■■□ 3.09
SCN1B-201ENST00000262631 KNDC1Q76NI1 1749 aa34.38■■■■□ 3.09
SCN1B-201ENST00000262631 ARHGEF28Q8N1W1 1705 aaKnown RBP34.38■■■■□ 3.09
SCN1B-201ENST00000262631 CPS1P31327 1500 aa34.38■■■■□ 3.09
SCN1B-201ENST00000262631 DLC1Q96QB1 1528 aa34.38■■■■□ 3.09
SCN1B-201ENST00000262631 WAPLQ7Z5K2 1190 aa34.38■■■■□ 3.09
SCN1B-201ENST00000262631 PRAM1Q96QH2 718 aa34.38■■■■□ 3.09
SCN1B-201ENST00000262631 PLEKHH1Q9ULM0 1364 aa34.37■■■■□ 3.09
SCN1B-201ENST00000262631 EIF3AQ14152 1382 aaKnown RBP34.36■■■■□ 3.09
SCN1B-201ENST00000262631 PTCH1Q13635 1447 aa34.35■■■■□ 3.09
SCN1B-201ENST00000262631 STRCP1A6NGW2 1772 aa34.34■■■■□ 3.09
SCN1B-201ENST00000262631 SAFB2Q14151 953 aaKnown RBP eCLIP34.34■■■■□ 3.09
SCN1B-201ENST00000262631 FAM135BQ49AJ0 1406 aa34.33■■■■□ 3.09
SCN1B-201ENST00000262631 SIRT1Q96EB6 747 aa34.32■■■■□ 3.08
SCN1B-201ENST00000262631 CENPJQ9HC77 1338 aaPredicted RBP34.32■■■■□ 3.08
SCN1B-201ENST00000262631 POGKQ9P215 609 aa34.31■■■■□ 3.08
SCN1B-201ENST00000262631 RBM33Q96EV2 1170 aaKnown RBP34.29■■■■□ 3.08
SCN1B-201ENST00000262631 NKTRP30414 1462 aaKnown RBP34.28■■■■□ 3.08
SCN1B-201ENST00000262631 TESK2Q96S53 571 aa34.28■■■■□ 3.08
SCN1B-201ENST00000262631 PROSER2Q86WR7 435 aaPredicted RBP34.23■■■■□ 3.07
SCN1B-201ENST00000262631 QRICH2Q9H0J4 1663 aa34.23■■■■□ 3.07
SCN1B-201ENST00000262631 MINK1Q8N4C8 1332 aaPredicted RBP34.21■■■■□ 3.07
SCN1B-201ENST00000262631 SBNO2Q9Y2G9 1366 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms