RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.39■■□□□ 1.33
TRAF4-201ENST00000262395 ZNF521Q96K83 1311 aa23.38■■□□□ 1.33
TRAF4-201ENST00000262395 PREX2Q70Z35 1606 aa23.38■■□□□ 1.33
TRAF4-201ENST00000262395 DMRT2Q9Y5R5 561 aa23.37■■□□□ 1.33
TRAF4-201ENST00000262395 INSRP06213 1382 aa23.36■■□□□ 1.33
TRAF4-201ENST00000262395 FRAT2O75474 233 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-201ENST00000262395 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
TRAF4-201ENST00000262395 UNC13BO14795 1591 aa23.34■■□□□ 1.33
TRAF4-201ENST00000262395 IGHDP01880 384 aa23.33■■□□□ 1.33
TRAF4-201ENST00000262395 EIF2AK4Q9P2K8 1649 aaKnown RBP23.32■■□□□ 1.32
TRAF4-201ENST00000262395 LAMC1P11047 1609 aa23.31■■□□□ 1.32
TRAF4-201ENST00000262395 NEUROD2Q15784 382 aa23.3■■□□□ 1.32
TRAF4-201ENST00000262395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.29■■□□□ 1.322e-6■■■□□ 16.3
TRAF4-201ENST00000262395 IQGAP3Q86VI3 1631 aa23.29■■□□□ 1.32
TRAF4-201ENST00000262395 PANK1Q8TE04 598 aa23.28■■□□□ 1.32
TRAF4-201ENST00000262395 CANXP27824 592 aaKnown RBP23.27■■□□□ 1.32
TRAF4-201ENST00000262395 TNNT2P45379 298 aaPredicted RBP23.27■■□□□ 1.32
TRAF4-201ENST00000262395 COG6Q9Y2V7 657 aa23.27■■□□□ 1.32
TRAF4-201ENST00000262395 SEC24BO95487 1268 aa23.26■■□□□ 1.31
TRAF4-201ENST00000262395 CDCA8Q53HL2 280 aa23.26■■□□□ 1.31
TRAF4-201ENST00000262395 TRMT2AQ8IZ69 625 aaKnown RBP23.25■■□□□ 1.31
TRAF4-201ENST00000262395 ASXL1Q8IXJ9 1541 aa23.24■■□□□ 1.31
TRAF4-201ENST00000262395 RRP7AQ9Y3A4 280 aaKnown RBP23.24■■□□□ 1.31
TRAF4-201ENST00000262395 AFAP1Q8N556 730 aa23.24■■□□□ 1.31
TRAF4-201ENST00000262395 CFAP70Q5T0N1 1121 aa23.23■■□□□ 1.31
TRAF4-201ENST00000262395 DUOX2Q9NRD8 1548 aa23.22■■□□□ 1.31
TRAF4-201ENST00000262395 NKTRP30414 1462 aaKnown RBP23.22■■□□□ 1.31
TRAF4-201ENST00000262395 CARD14Q9BXL6 1004 aa23.22■■□□□ 1.31
TRAF4-201ENST00000262395 RNF17Q9BXT8 1623 aaKnown RBP23.22■■□□□ 1.31
TRAF4-201ENST00000262395 MAST1Q9Y2H9 1570 aa23.22■■□□□ 1.31
TRAF4-201ENST00000262395 ATP10AO60312 1499 aa23.2■■□□□ 1.3
TRAF4-201ENST00000262395 SCAF11Q99590 1463 aaKnown RBP23.2■■□□□ 1.3
TRAF4-201ENST00000262395 E9PSI1 815 aa23.2■■□□□ 1.3
TRAF4-201ENST00000262395 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.3
TRAF4-201ENST00000262395 SLKQ9H2G2 1235 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-201ENST00000262395 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
TRAF4-201ENST00000262395 PIK3C2GO75747 1445 aa23.19■■□□□ 1.3
TRAF4-201ENST00000262395 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
TRAF4-201ENST00000262395 BCL2L13Q9BXK5 485 aa23.19■■□□□ 1.3
TRAF4-201ENST00000262395 TNNQ9UQP3 1299 aa23.19■■□□□ 1.3
TRAF4-201ENST00000262395 EFCAB2Q5VUJ9 269 aa23.18■■□□□ 1.3
TRAF4-201ENST00000262395 PLXNC1O60486 1568 aa23.18■■□□□ 1.3
TRAF4-201ENST00000262395 USP19O94966 1318 aa23.17■■□□□ 1.3
TRAF4-201ENST00000262395 CENPJQ9HC77 1338 aaPredicted RBP23.17■■□□□ 1.3
TRAF4-201ENST00000262395 EIF3AQ14152 1382 aaKnown RBP23.17■■□□□ 1.3
TRAF4-201ENST00000262395 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
TRAF4-201ENST00000262395 CLUAP1Q96AJ1 413 aa23.15■■□□□ 1.3
TRAF4-201ENST00000262395 SPAG9O60271 1321 aaKnown RBP23.15■■□□□ 1.3
TRAF4-201ENST00000262395 SYNMO15061 1565 aa23.15■■□□□ 1.3
TRAF4-201ENST00000262395 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
TRAF4-201ENST00000262395 ADGRF5Q8IZF2 1346 aa23.12■■□□□ 1.29
TRAF4-201ENST00000262395 ERCC6L2Q5T890 1561 aa23.12■■□□□ 1.29
TRAF4-201ENST00000262395 POGKQ9P215 609 aa23.12■■□□□ 1.29
TRAF4-201ENST00000262395 MYOM1P52179 1685 aa23.11■■□□□ 1.29
TRAF4-201ENST00000262395 ARXQ96QS3 562 aa23.11■■□□□ 1.29
TRAF4-201ENST00000262395 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
TRAF4-201ENST00000262395 CLASP1Q7Z460 1538 aa23.1■■□□□ 1.29
TRAF4-201ENST00000262395 KIF3BO15066 747 aa23.09■■□□□ 1.29
TRAF4-201ENST00000262395 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
TRAF4-201ENST00000262395 RLBP1P12271 317 aa23.09■■□□□ 1.29
TRAF4-201ENST00000262395 CLTCL1P53675 1640 aa23.08■■□□□ 1.29
TRAF4-201ENST00000262395 CHGAP10645 457 aaKnown RBP23.08■■□□□ 1.29
TRAF4-201ENST00000262395 PDE3AQ14432 1141 aa23.08■■□□□ 1.29
TRAF4-201ENST00000262395 PLCH2O75038 1416 aa23.08■■□□□ 1.28
TRAF4-201ENST00000262395 PCDHB15Q9Y5E8 787 aa23.08■■□□□ 1.28
TRAF4-201ENST00000262395 ABCC2Q92887 1545 aa23.07■■□□□ 1.28
TRAF4-201ENST00000262395 MORC1Q86VD1 984 aa23.06■■□□□ 1.28
TRAF4-201ENST00000262395 SCAPERQ9BY12 1400 aa23.06■■□□□ 1.28
TRAF4-201ENST00000262395 NPC1L1Q9UHC9 1359 aa23.06■■□□□ 1.28
TRAF4-201ENST00000262395 UBE2Q2Q8WVN8 375 aa23.05■■□□□ 1.28
TRAF4-201ENST00000262395 UGGT1Q9NYU2 1555 aa23.05■■□□□ 1.28
TRAF4-201ENST00000262395 ERVK-7P63135 1459 aa23.05■■□□□ 1.28
TRAF4-201ENST00000262395 SPHKAPQ2M3C7 1700 aa23.05■■□□□ 1.28
TRAF4-201ENST00000262395 TCP11L2Q8N4U5 519 aa23.05■■□□□ 1.28
TRAF4-201ENST00000262395 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
TRAF4-201ENST00000262395 TRAK1Q9UPV9 953 aa23.04■■□□□ 1.28
TRAF4-201ENST00000262395 RARSP54136 660 aaKnown RBP23.04■■□□□ 1.28
TRAF4-201ENST00000262395 TRPM2O94759 1503 aa23.03■■□□□ 1.28
TRAF4-201ENST00000262395 MAPK8IP3Q9UPT6 1336 aa23.03■■□□□ 1.28
TRAF4-201ENST00000262395 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
TRAF4-201ENST00000262395 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
TRAF4-201ENST00000262395 BECN1Q14457 450 aa23.02■■□□□ 1.27
TRAF4-201ENST00000262395 PDZRN3Q9UPQ7 1066 aa23.02■■□□□ 1.27
TRAF4-201ENST00000262395 PTPRTO14522 1441 aa23■■□□□ 1.27
TRAF4-201ENST00000262395 ABCC1P33527 1531 aa22.99■■□□□ 1.27
TRAF4-201ENST00000262395 CEP152O94986 1710 aa22.98■■□□□ 1.27
TRAF4-201ENST00000262395 NSD3Q9BZ95 1437 aa22.98■■□□□ 1.27
TRAF4-201ENST00000262395 TMEM132EQ6IEE7 984 aa22.98■■□□□ 1.27
TRAF4-201ENST00000262395 RUNDC1Q96C34 613 aa22.98■■□□□ 1.27
TRAF4-201ENST00000262395 CHD1O14646 1710 aa22.98■■□□□ 1.27
TRAF4-201ENST00000262395 MTHFSP49914 203 aa22.97■■□□□ 1.27
TRAF4-201ENST00000262395 KANK1Q14678 1352 aa22.96■■□□□ 1.27
TRAF4-201ENST00000262395 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.27
TRAF4-201ENST00000262395 STAC3Q96MF2 364 aa22.95■■□□□ 1.27
TRAF4-201ENST00000262395 UPF2Q9HAU5 1272 aaKnown RBP22.95■■□□□ 1.26
TRAF4-201ENST00000262395 TBC1D2Q9BYX2 928 aa22.95■■□□□ 1.26
TRAF4-201ENST00000262395 POLR3AO14802 1390 aaPredicted RBP22.94■■□□□ 1.26
TRAF4-201ENST00000262395 NUTM2DQ5VT03 806 aaPredicted RBP22.93■■□□□ 1.26
TRAF4-201ENST00000262395 NLRP1Q9C000 1473 aa22.93■■□□□ 1.26
TRAF4-201ENST00000262395 GZF1Q9H116 711 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms