RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CAVIN1Q6NZI2 390 aaKnown RBP19.95■□□□□ 0.78
PRPF40B-201ENST00000261897 USP19O94966 1318 aa19.94■□□□□ 0.78
PRPF40B-201ENST00000261897 MCTP1Q6DN14 999 aa19.94■□□□□ 0.78
PRPF40B-201ENST00000261897 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
PRPF40B-201ENST00000261897 EFCAB5A4FU69 1503 aa19.94■□□□□ 0.78
PRPF40B-201ENST00000261897 EHBP1L1Q8N3D4 1523 aa19.94■□□□□ 0.78
PRPF40B-201ENST00000261897 TSR2Q969E8 191 aaKnown RBP19.94■□□□□ 0.78
PRPF40B-201ENST00000261897 CALD1Q05682 793 aaKnown RBP19.93■□□□□ 0.78
PRPF40B-201ENST00000261897 TNPO1Q92973 898 aaKnown RBP19.93■□□□□ 0.78
PRPF40B-201ENST00000261897 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
PRPF40B-201ENST00000261897 PARD3Q8TEW0 1356 aa19.92■□□□□ 0.78
PRPF40B-201ENST00000261897 ELL2O00472 640 aaPredicted RBP19.92■□□□□ 0.78
PRPF40B-201ENST00000261897 GAS2L3Q86XJ1 694 aa19.91■□□□□ 0.78
PRPF40B-201ENST00000261897 ANKRD45Q5TZF3 282 aa19.9■□□□□ 0.78
PRPF40B-201ENST00000261897 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
PRPF40B-201ENST00000261897 CDCA8Q53HL2 280 aa19.89■□□□□ 0.78
PRPF40B-201ENST00000261897 TCP11L2Q8N4U5 519 aa19.89■□□□□ 0.77
PRPF40B-201ENST00000261897 RBM42Q9BTD8 480 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-201ENST00000261897 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
PRPF40B-201ENST00000261897 PDE3AQ14432 1141 aa19.88■□□□□ 0.77
PRPF40B-201ENST00000261897 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
PRPF40B-201ENST00000261897 C1orf115Q9H7X2 142 aa19.88■□□□□ 0.77
PRPF40B-201ENST00000261897 BCORL1Q5H9F3 1711 aa19.88■□□□□ 0.77
PRPF40B-201ENST00000261897 TPM2P07951 284 aa19.88■□□□□ 0.77
PRPF40B-201ENST00000261897 SSFA2P28290 1259 aa19.88■□□□□ 0.77
PRPF40B-201ENST00000261897 ANTXR1Q9H6X2 564 aa19.87■□□□□ 0.77
PRPF40B-201ENST00000261897 UQCRHLA0A096LP55 91 aa19.87■□□□□ 0.77
PRPF40B-201ENST00000261897 UQCRHP07919 91 aa19.87■□□□□ 0.77
PRPF40B-201ENST00000261897 WWC1Q8IX03 1113 aa19.86■□□□□ 0.77
PRPF40B-201ENST00000261897 DZIP1LQ8IYY4 767 aaKnown RBP19.86■□□□□ 0.77
PRPF40B-201ENST00000261897 PDCL3Q9H2J4 239 aa19.86■□□□□ 0.77
PRPF40B-201ENST00000261897 ZKSCAN2Q63HK3 967 aa19.85■□□□□ 0.77
PRPF40B-201ENST00000261897 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
PRPF40B-201ENST00000261897 EPRSP07814 1512 aaKnown RBP19.85■□□□□ 0.77
PRPF40B-201ENST00000261897 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.84■□□□□ 0.77
PRPF40B-201ENST00000261897 MAGI3Q5TCQ9 1506 aa19.83■□□□□ 0.77
PRPF40B-201ENST00000261897 NESP48681 1621 aa19.83■□□□□ 0.77
PRPF40B-201ENST00000261897 UGGT2Q9NYU1 1516 aa19.83■□□□□ 0.76
PRPF40B-201ENST00000261897 RARSP54136 660 aaKnown RBP19.83■□□□□ 0.76
PRPF40B-201ENST00000261897 ZSCAN30Q86W11 494 aa19.82■□□□□ 0.76
PRPF40B-201ENST00000261897 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
PRPF40B-201ENST00000261897 CFAP53Q96M91 514 aa19.82■□□□□ 0.76
PRPF40B-201ENST00000261897 FAM177BA6PVY3 158 aa19.81■□□□□ 0.76
PRPF40B-201ENST00000261897 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
PRPF40B-201ENST00000261897 PRPF40AO75400 957 aaKnown RBP19.81■□□□□ 0.76
PRPF40B-201ENST00000261897 TESK2Q96S53 571 aa19.81■□□□□ 0.76
PRPF40B-201ENST00000261897 ERBINQ96RT1 1412 aa19.8■□□□□ 0.76
PRPF40B-201ENST00000261897 FSD2A1L4K1 749 aa19.8■□□□□ 0.76
PRPF40B-201ENST00000261897 SLC24A1O60721 1099 aa19.8■□□□□ 0.76
PRPF40B-201ENST00000261897 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
PRPF40B-201ENST00000261897 NUTM2DQ5VT03 806 aaPredicted RBP19.79■□□□□ 0.76
PRPF40B-201ENST00000261897 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
PRPF40B-201ENST00000261897 RBM27Q9P2N5 1060 aaKnown RBP19.79■□□□□ 0.76
PRPF40B-201ENST00000261897 NKTRP30414 1462 aaKnown RBP19.79■□□□□ 0.76
PRPF40B-201ENST00000261897 HECW1Q76N89 1606 aa19.78■□□□□ 0.76
PRPF40B-201ENST00000261897 CCDC173Q0VFZ6 552 aa19.78■□□□□ 0.76
PRPF40B-201ENST00000261897 SKOR2Q2VWA4 1001 aaPredicted RBP19.78■□□□□ 0.76
PRPF40B-201ENST00000261897 TSC1Q92574 1164 aa19.78■□□□□ 0.76
PRPF40B-201ENST00000261897 PZPP20742 1482 aa19.77■□□□□ 0.76
PRPF40B-201ENST00000261897 EXOSC9Q06265 439 aaKnown RBP19.77■□□□□ 0.76
PRPF40B-201ENST00000261897 TRAK1Q9UPV9 953 aa19.77■□□□□ 0.76
PRPF40B-201ENST00000261897 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
PRPF40B-201ENST00000261897 CHAMP1Q96JM3 812 aa19.77■□□□□ 0.76
PRPF40B-201ENST00000261897 IGSF3O75054 1194 aa19.77■□□□□ 0.75
PRPF40B-201ENST00000261897 ROCK1Q13464 1354 aa19.76■□□□□ 0.75
PRPF40B-201ENST00000261897 EIF3AQ14152 1382 aaKnown RBP19.76■□□□□ 0.75
PRPF40B-201ENST00000261897 MTHFSP49914 203 aa19.75■□□□□ 0.75
PRPF40B-201ENST00000261897 MVPQ14764 893 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-201ENST00000261897 CBX1P83916 185 aa19.74■□□□□ 0.75
PRPF40B-201ENST00000261897 NOB1Q9ULX3 412 aaKnown RBP19.72■□□□□ 0.75
PRPF40B-201ENST00000261897 RALGAPBQ86X10 1494 aa19.72■□□□□ 0.75
PRPF40B-201ENST00000261897 SYCE3A1L190 88 aa19.71■□□□□ 0.75
PRPF40B-201ENST00000261897 RUNDC1Q96C34 613 aa19.71■□□□□ 0.75
PRPF40B-201ENST00000261897 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
PRPF40B-201ENST00000261897 SLC12A5Q9H2X9 1139 aa19.71■□□□□ 0.75
PRPF40B-201ENST00000261897 ZNF830Q96NB3 372 aaPredicted RBP19.7■□□□□ 0.74
PRPF40B-201ENST00000261897 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
PRPF40B-201ENST00000261897 TMEM57Q8N5G2 664 aa19.69■□□□□ 0.74
PRPF40B-201ENST00000261897 K7ELQ4 463 aaPredicted RBP19.69■□□□□ 0.74
PRPF40B-201ENST00000261897 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
PRPF40B-201ENST00000261897 JARID2Q92833 1246 aaPredicted RBP19.69■□□□□ 0.74
PRPF40B-201ENST00000261897 CD2BP2O95400 341 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-201ENST00000261897 DDX19BQ9UMR2 479 aa19.68■□□□□ 0.74
PRPF40B-201ENST00000261897 KIAA2012Q0VF49 1180 aa19.67■□□□□ 0.74
PRPF40B-201ENST00000261897 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
PRPF40B-201ENST00000261897 SSH1Q8WYL5 1049 aa19.66■□□□□ 0.74
PRPF40B-201ENST00000261897 ZMYM4Q5VZL5 1548 aa19.66■□□□□ 0.74
PRPF40B-201ENST00000261897 SPDYE4A6NLX3 237 aa19.66■□□□□ 0.74
PRPF40B-201ENST00000261897 TRIM27P14373 513 aa19.66■□□□□ 0.74
PRPF40B-201ENST00000261897 BAG4O95429 457 aaKnown RBP19.65■□□□□ 0.74
PRPF40B-201ENST00000261897 PRIM1P49642 420 aaKnown RBP19.65■□□□□ 0.74
PRPF40B-201ENST00000261897 TCOF1Q13428 1488 aaKnown RBP19.65■□□□□ 0.74
PRPF40B-201ENST00000261897 STK26Q9P289 416 aa19.65■□□□□ 0.74
PRPF40B-201ENST00000261897 C9orf84Q5VXU9 1444 aa19.65■□□□□ 0.74
PRPF40B-201ENST00000261897 OFD1O75665 1012 aa19.64■□□□□ 0.74
PRPF40B-201ENST00000261897 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.74
PRPF40B-201ENST00000261897 KDM5CP41229 1560 aa19.64■□□□□ 0.73
PRPF40B-201ENST00000261897 KIAA0586Q9BVV6 1533 aa19.64■□□□□ 0.73
PRPF40B-201ENST00000261897 GDPD2Q9HCC8 539 aa19.63■□□□□ 0.73
PRPF40B-201ENST00000261897 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms