RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 DEKP35659 375 aaKnown RBP15.07■□□□□ 0
SPG11-201ENST00000261866 MTMR7Q9Y216 660 aa15.07■□□□□ 0
SPG11-201ENST00000261866 MYBBP1AQ9BQG0 1328 aaKnown RBP15.07■□□□□ 0
SPG11-201ENST00000261866 DHX16O60231 1041 aaKnown RBP15.07■□□□□ 0
SPG11-201ENST00000261866 DIAPH1O60610 1272 aaKnown RBP15.06■□□□□ 0
SPG11-201ENST00000261866 KIF16BQ96L93 1317 aa15.06■□□□□ 0
SPG11-201ENST00000261866 PIP4K2BP78356 416 aa15.06■□□□□ 0
SPG11-201ENST00000261866 SF3A1Q15459 793 aaKnown RBP15.06■□□□□ 0
SPG11-201ENST00000261866 H3BQV1 296 aa15.05■□□□□ 0
SPG11-201ENST00000261866 ESCO1Q5FWF5 840 aa15.05■□□□□ 0
SPG11-201ENST00000261866 IFFO2Q5TF58 517 aa15.05■□□□□ 0
SPG11-201ENST00000261866 NEXNQ0ZGT2 675 aa15.05■□□□□ 0
SPG11-201ENST00000261866 MCTP1Q6DN14 999 aa15.05■□□□□ 0
SPG11-201ENST00000261866 CRBNQ96SW2 442 aa15.05■□□□□ -0
SPG11-201ENST00000261866 CTDP1Q9Y5B0 961 aaPredicted RBP15.05■□□□□ -0
SPG11-201ENST00000261866 USP47Q96K76 1375 aa15.05■□□□□ -0
SPG11-201ENST00000261866 CHMP4AQ9BY43 222 aa15.04■□□□□ -0
SPG11-201ENST00000261866 FKBP5Q13451 457 aaPredicted RBP15.04■□□□□ -0
SPG11-201ENST00000261866 EXOC6Q8TAG9 804 aa15.04■□□□□ -0
SPG11-201ENST00000261866 HTATSF1O43719 755 aaKnown RBP15.03■□□□□ -0
SPG11-201ENST00000261866 HDAC5Q9UQL6 1122 aa15.03■□□□□ -0
SPG11-201ENST00000261866 NOL10Q9BSC4 688 aaKnown RBP15.03■□□□□ -0
SPG11-201ENST00000261866 UACAQ9BZF9 1416 aa15.03■□□□□ -0
SPG11-201ENST00000261866 TSPYL4Q9UJ04 414 aa15.02■□□□□ -0
SPG11-201ENST00000261866 BCL11BQ9C0K0 894 aaPredicted RBP15.02■□□□□ -0
SPG11-201ENST00000261866 AFAP1Q8N556 730 aa15.02□□□□□ -0.01
SPG11-201ENST00000261866 GAPVD1Q14C86 1478 aa15.02□□□□□ -0.01
SPG11-201ENST00000261866 FAM184AQ8NB25 1140 aa15.01□□□□□ -0.01
SPG11-201ENST00000261866 RAPGEF4Q8WZA2 1011 aa15.01□□□□□ -0.01
SPG11-201ENST00000261866 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
SPG11-201ENST00000261866 CNKSR2Q8WXI2 1034 aa15.01□□□□□ -0.01
SPG11-201ENST00000261866 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
SPG11-201ENST00000261866 TCEAL9Q9UHQ7 104 aa15.01□□□□□ -0.01
SPG11-201ENST00000261866 TPM4P67936 248 aa15.01□□□□□ -0.01
SPG11-201ENST00000261866 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
SPG11-201ENST00000261866 DIAPH3Q9NSV4 1193 aa15□□□□□ -0.01
SPG11-201ENST00000261866 ZKSCAN2Q63HK3 967 aa15□□□□□ -0.01
SPG11-201ENST00000261866 CWC22Q9HCG8 908 aaKnown RBP15□□□□□ -0.01
SPG11-201ENST00000261866 NLRP6P59044 892 aa15□□□□□ -0.01
SPG11-201ENST00000261866 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
SPG11-201ENST00000261866 IFIT2P09913 472 aaKnown RBP15□□□□□ -0.01
SPG11-201ENST00000261866 NEUROD6Q96NK8 337 aa15□□□□□ -0.01
SPG11-201ENST00000261866 CCDC27Q2M243 656 aa15□□□□□ -0.01
SPG11-201ENST00000261866 ANO2Q9NQ90 1003 aa15□□□□□ -0.01
SPG11-201ENST00000261866 RIC3Q7Z5B4 369 aa14.99□□□□□ -0.01
SPG11-201ENST00000261866 RBM33Q96EV2 1170 aaKnown RBP14.99□□□□□ -0.01
SPG11-201ENST00000261866 ABTB2Q8N961 1025 aa14.99□□□□□ -0.01
SPG11-201ENST00000261866 ST18O60284 1047 aa14.98□□□□□ -0.01
SPG11-201ENST00000261866 XPCQ01831 940 aaPredicted RBP14.98□□□□□ -0.01
SPG11-201ENST00000261866 TPD52L1Q16890 204 aaPredicted RBP14.98□□□□□ -0.01
SPG11-201ENST00000261866 TXNDC2Q86VQ3 553 aa14.98□□□□□ -0.01
SPG11-201ENST00000261866 PROSER2Q86WR7 435 aaPredicted RBP14.97□□□□□ -0.01
SPG11-201ENST00000261866 AMOTL1Q8IY63 956 aa14.97□□□□□ -0.01
SPG11-201ENST00000261866 SYAP1Q96A49 352 aaPredicted RBP14.96□□□□□ -0.01
SPG11-201ENST00000261866 SYNE3Q6ZMZ3 975 aa14.96□□□□□ -0.02
SPG11-201ENST00000261866 NFXL1Q6ZNB6 911 aa14.95□□□□□ -0.02
SPG11-201ENST00000261866 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
SPG11-201ENST00000261866 E9PSI1 815 aa14.95□□□□□ -0.02
SPG11-201ENST00000261866 DHX57Q6P158 1386 aaKnown RBP14.95□□□□□ -0.02
SPG11-201ENST00000261866 STK11IPQ8N1F8 1099 aa14.95□□□□□ -0.02
SPG11-201ENST00000261866 ARHGAP5Q13017 1502 aa14.94□□□□□ -0.02
SPG11-201ENST00000261866 G3BP1Q13283 466 aaKnown RBP eCLIP14.94□□□□□ -0.02
SPG11-201ENST00000261866 DDX54Q8TDD1 881 aaKnown RBP14.94□□□□□ -0.02
SPG11-201ENST00000261866 CCAR2Q8N163 923 aaKnown RBP14.93□□□□□ -0.02
SPG11-201ENST00000261866 TNNT3P45378 269 aaPredicted RBP14.93□□□□□ -0.02
SPG11-201ENST00000261866 DDX58O95786 925 aaKnown RBP14.93□□□□□ -0.02
SPG11-201ENST00000261866 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
SPG11-201ENST00000261866 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
SPG11-201ENST00000261866 GOLGA6L3A6NEY3 463 aa14.92□□□□□ -0.02
SPG11-201ENST00000261866 CFAP70Q5T0N1 1121 aa14.92□□□□□ -0.02
SPG11-201ENST00000261866 CCDC34Q96HJ3 373 aa14.92□□□□□ -0.02
SPG11-201ENST00000261866 RRP1P56182 461 aaKnown RBP14.92□□□□□ -0.02
SPG11-201ENST00000261866 WASHC4Q2M389 1173 aa14.92□□□□□ -0.02
SPG11-201ENST00000261866 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
SPG11-201ENST00000261866 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
SPG11-201ENST00000261866 PRAM1Q96QH2 718 aa14.9□□□□□ -0.02
SPG11-201ENST00000261866 PDE3BQ13370 1112 aa14.9□□□□□ -0.02
SPG11-201ENST00000261866 PANK1Q8TE04 598 aa14.9□□□□□ -0.02
SPG11-201ENST00000261866 PCMTD1Q96MG8 357 aaPredicted RBP14.9□□□□□ -0.02
SPG11-201ENST00000261866 CSPP1Q1MSJ5 1256 aa14.9□□□□□ -0.02
SPG11-201ENST00000261866 DZIP1LQ8IYY4 767 aaKnown RBP14.89□□□□□ -0.03
SPG11-201ENST00000261866 LNPKQ9C0E8 428 aa14.89□□□□□ -0.03
SPG11-201ENST00000261866 CPLX1O14810 134 aa14.88□□□□□ -0.03
SPG11-201ENST00000261866 TRIM29Q14134 588 aa14.88□□□□□ -0.03
SPG11-201ENST00000261866 SLC26A8Q96RN1 970 aa14.88□□□□□ -0.03
SPG11-201ENST00000261866 RAPGEF3O95398 923 aa14.88□□□□□ -0.03
SPG11-201ENST00000261866 IGF1RP08069 1367 aa14.88□□□□□ -0.03
SPG11-201ENST00000261866 IPO9Q96P70 1041 aaKnown RBP14.88□□□□□ -0.03
SPG11-201ENST00000261866 C1orf115Q9H7X2 142 aa14.88□□□□□ -0.03
SPG11-201ENST00000261866 RUNDC1Q96C34 613 aa14.87□□□□□ -0.03
SPG11-201ENST00000261866 DNAJC2Q99543 621 aaKnown RBP14.87□□□□□ -0.03
SPG11-201ENST00000261866 IKQ13123 557 aaPredicted RBP14.87□□□□□ -0.03
SPG11-201ENST00000261866 CHMP4CQ96CF2 233 aa14.87□□□□□ -0.03
SPG11-201ENST00000261866 NESP48681 1621 aa14.86□□□□□ -0.03
SPG11-201ENST00000261866 MTHFSP49914 203 aa14.86□□□□□ -0.03
SPG11-201ENST00000261866 CENPQQ7L2Z9 268 aaPredicted RBP14.86□□□□□ -0.03
SPG11-201ENST00000261866 TOM1L2Q6ZVM7 507 aa14.86□□□□□ -0.03
SPG11-201ENST00000261866 TSHZ2Q9NRE2 1034 aa14.86□□□□□ -0.03
SPG11-201ENST00000261866 TRDNQ13061 729 aa14.85□□□□□ -0.03
SPG11-201ENST00000261866 GOLGA6L1Q8N7Z2 621 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms