RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 REC8O95072 547 aa12.02□□□□□ -0.49
CIT-201ENST00000261833 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.49
CIT-201ENST00000261833 U2AF1L5P0DN76 240 aaPredicted RBP12.01□□□□□ -0.49
CIT-201ENST00000261833 U2AF1Q01081 240 aaKnown RBP eCLIP12.01□□□□□ -0.49
CIT-201ENST00000261833 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
CIT-201ENST00000261833 G3V3G9 751 aa12.01□□□□□ -0.49
CIT-201ENST00000261833 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
CIT-201ENST00000261833 KDM5AP29375 1690 aaKnown RBP12.01□□□□□ -0.49
CIT-201ENST00000261833 NUCB2P80303 420 aa12.01□□□□□ -0.49
CIT-201ENST00000261833 HDAC5Q9UQL6 1122 aa12.01□□□□□ -0.49
CIT-201ENST00000261833 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
CIT-201ENST00000261833 NCOA2Q15596 1464 aa12□□□□□ -0.49
CIT-201ENST00000261833 RSPH4AQ5TD94 716 aa12□□□□□ -0.49
CIT-201ENST00000261833 TAF3Q5VWG9 929 aa12□□□□□ -0.49
CIT-201ENST00000261833 FGD5Q6ZNL6 1462 aa12□□□□□ -0.49
CIT-201ENST00000261833 CCDC173Q0VFZ6 552 aa12□□□□□ -0.49
CIT-201ENST00000261833 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
CIT-201ENST00000261833 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
CIT-201ENST00000261833 CCDC146Q8IYE0 955 aa11.99□□□□□ -0.49
CIT-201ENST00000261833 DIAPH3Q9NSV4 1193 aa11.99□□□□□ -0.49
CIT-201ENST00000261833 CCDC70Q6NSX1 233 aa11.98□□□□□ -0.49
CIT-201ENST00000261833 LETM1O95202 739 aaPredicted RBP11.97□□□□□ -0.49
CIT-201ENST00000261833 ZKSCAN2Q63HK3 967 aa11.97□□□□□ -0.49
CIT-201ENST00000261833 MYH10P35580 1976 aa11.97□□□□□ -0.49
CIT-201ENST00000261833 PLIN1O60240 522 aa11.97□□□□□ -0.49
CIT-201ENST00000261833 HSP90B1P14625 803 aaKnown RBP11.97□□□□□ -0.49
CIT-201ENST00000261833 CCDC66A2RUB6 948 aa11.97□□□□□ -0.49
CIT-201ENST00000261833 SLC4A3P48751 1232 aa11.97□□□□□ -0.49
CIT-201ENST00000261833 CWC15Q9P013 229 aaKnown RBP11.97□□□□□ -0.49
CIT-201ENST00000261833 A0A0U1RQG5 324 aaPredicted RBP11.96□□□□□ -0.49
CIT-201ENST00000261833 TERF2IPQ9NYB0 399 aa11.96□□□□□ -0.49
CIT-201ENST00000261833 CACNA1FO60840 1977 aa11.96□□□□□ -0.49
CIT-201ENST00000261833 TPM3P06753 285 aa11.96□□□□□ -0.5
CIT-201ENST00000261833 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.5
CIT-201ENST00000261833 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.5
CIT-201ENST00000261833 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
CIT-201ENST00000261833 C22orf23Q9BZE7 217 aa11.95□□□□□ -0.5
CIT-201ENST00000261833 WASHC2AQ641Q2 1341 aa11.95□□□□□ -0.5
CIT-201ENST00000261833 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
CIT-201ENST00000261833 HMGN5P82970 282 aaKnown RBP11.95□□□□□ -0.5
CIT-201ENST00000261833 HFM1A2PYH4 1435 aa11.95□□□□□ -0.5
CIT-201ENST00000261833 ANKRD45Q5TZF3 282 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 PANK3Q9H999 370 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 APBB1O00213 710 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 ST20-MTHFSA0A0A6YYL1 179 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 H3BQV1 296 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 GAPVD1Q14C86 1478 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 HMGXB3Q12766 1538 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
CIT-201ENST00000261833 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
CIT-201ENST00000261833 ARGLU1Q9NWB6 273 aaPredicted RBP11.94□□□□□ -0.5
CIT-201ENST00000261833 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
CIT-201ENST00000261833 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
CIT-201ENST00000261833 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
CIT-201ENST00000261833 TRAK2O60296 914 aa11.93□□□□□ -0.5
CIT-201ENST00000261833 IQGAP2Q13576 1575 aa11.93□□□□□ -0.5
CIT-201ENST00000261833 INTS3Q68E01 1043 aaKnown RBP11.92□□□□□ -0.5
CIT-201ENST00000261833 TPM1P09493 284 aa11.92□□□□□ -0.5
CIT-201ENST00000261833 MSH5O43196 834 aa11.92□□□□□ -0.5
CIT-201ENST00000261833 FAM135AQ9P2D6 1515 aa11.92□□□□□ -0.5
CIT-201ENST00000261833 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
CIT-201ENST00000261833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.91□□□□□ -0.5
CIT-201ENST00000261833 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
CIT-201ENST00000261833 BACH2Q9BYV9 841 aa11.91□□□□□ -0.5
CIT-201ENST00000261833 HOOK1Q9UJC3 728 aaKnown RBP11.91□□□□□ -0.5
CIT-201ENST00000261833 ARHGAP5Q13017 1502 aa11.91□□□□□ -0.5
CIT-201ENST00000261833 BECN2A8MW95 431 aa11.91□□□□□ -0.5
CIT-201ENST00000261833 IL27Q8NEV9 243 aa11.9□□□□□ -0.5
CIT-201ENST00000261833 NAT10Q9H0A0 1025 aaKnown RBP11.9□□□□□ -0.5
CIT-201ENST00000261833 CLUAP1Q96AJ1 413 aa11.9□□□□□ -0.5
CIT-201ENST00000261833 POLA1P09884 1462 aaPredicted RBP11.9□□□□□ -0.5
CIT-201ENST00000261833 CALRP27797 417 aaKnown RBP11.89□□□□□ -0.51
CIT-201ENST00000261833 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
CIT-201ENST00000261833 ACBD3Q9H3P7 528 aa11.88□□□□□ -0.51
CIT-201ENST00000261833 MBD3O95983 291 aa11.88□□□□□ -0.51
CIT-201ENST00000261833 ZNF592Q92610 1267 aa11.88□□□□□ -0.51
CIT-201ENST00000261833 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
CIT-201ENST00000261833 AQRO60306 1485 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■■■■ 42.6
CIT-201ENST00000261833 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
CIT-201ENST00000261833 MCM2P49736 904 aa11.87□□□□□ -0.51
CIT-201ENST00000261833 NKTRP30414 1462 aaKnown RBP11.87□□□□□ -0.51
CIT-201ENST00000261833 CFTRP13569 1480 aa11.87□□□□□ -0.51
CIT-201ENST00000261833 CCP110O43303 1012 aa11.87□□□□□ -0.51
CIT-201ENST00000261833 CSB-PGBD3P0DP91 1061 aa11.87□□□□□ -0.51
CIT-201ENST00000261833 DHX8Q14562 1220 aaKnown RBP11.87□□□□□ -0.51
CIT-201ENST00000261833 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
CIT-201ENST00000261833 FOXD4L4Q8WXT5 416 aaPredicted RBP11.87□□□□□ -0.51
CIT-201ENST00000261833 RUNDC1Q96C34 613 aa11.87□□□□□ -0.51
CIT-201ENST00000261833 PEG3Q9GZU2 1588 aa11.86□□□□□ -0.51
CIT-201ENST00000261833 R3HCC1Q9Y3T6 440 aaKnown RBP11.86□□□□□ -0.51
CIT-201ENST00000261833 SF3A1Q15459 793 aaKnown RBP11.86□□□□□ -0.51
CIT-201ENST00000261833 COG6Q9Y2V7 657 aa11.86□□□□□ -0.51
CIT-201ENST00000261833 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
CIT-201ENST00000261833 SASS6Q6UVJ0 657 aa11.86□□□□□ -0.51
CIT-201ENST00000261833 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
CIT-201ENST00000261833 FAM184AQ8NB25 1140 aa11.86□□□□□ -0.51
CIT-201ENST00000261833 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
CIT-201ENST00000261833 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
CIT-201ENST00000261833 AK7Q96M32 723 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms