RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 TAF3Q5VWG9 929 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 NUCB2P80303 420 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 CDR1P51861 262 aa13.1□□□□□ -0.31
SLC6A4-201ENST00000261707 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
SLC6A4-201ENST00000261707 UQCRHLA0A096LP55 91 aa13.09□□□□□ -0.31
SLC6A4-201ENST00000261707 NUTM2FA1L443 756 aa13.09□□□□□ -0.31
SLC6A4-201ENST00000261707 UQCRHP07919 91 aa13.09□□□□□ -0.31
SLC6A4-201ENST00000261707 SASS6Q6UVJ0 657 aa13.09□□□□□ -0.31
SLC6A4-201ENST00000261707 RILPL2Q969X0 211 aa13.08□□□□□ -0.31
SLC6A4-201ENST00000261707 AMPHP49418 695 aa13.08□□□□□ -0.32
SLC6A4-201ENST00000261707 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
SLC6A4-201ENST00000261707 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
SLC6A4-201ENST00000261707 WASHC2AQ641Q2 1341 aa13.08□□□□□ -0.32
SLC6A4-201ENST00000261707 IPO7O95373 1038 aaKnown RBP13.08□□□□□ -0.32
SLC6A4-201ENST00000261707 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
SLC6A4-201ENST00000261707 ERCC4Q92889 916 aaPredicted RBP13.07□□□□□ -0.32
SLC6A4-201ENST00000261707 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
SLC6A4-201ENST00000261707 BICD2Q8TD16 824 aa13.07□□□□□ -0.32
SLC6A4-201ENST00000261707 STK31Q9BXU1 1019 aa13.07□□□□□ -0.32
SLC6A4-201ENST00000261707 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
SLC6A4-201ENST00000261707 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
SLC6A4-201ENST00000261707 SLC4A10Q6U841 1118 aa13.06□□□□□ -0.32
SLC6A4-201ENST00000261707 RNF214Q8ND24 703 aa13.06□□□□□ -0.32
SLC6A4-201ENST00000261707 SPAG9O60271 1321 aaKnown RBP13.06□□□□□ -0.32
SLC6A4-201ENST00000261707 ATF3P18847 181 aa13.06□□□□□ -0.32
SLC6A4-201ENST00000261707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
SLC6A4-201ENST00000261707 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
SLC6A4-201ENST00000261707 PLCD4Q9BRC7 762 aa13.05□□□□□ -0.32
SLC6A4-201ENST00000261707 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
SLC6A4-201ENST00000261707 PCMTD1Q96MG8 357 aaPredicted RBP13.05□□□□□ -0.32
SLC6A4-201ENST00000261707 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
SLC6A4-201ENST00000261707 REC8O95072 547 aa13.04□□□□□ -0.32
SLC6A4-201ENST00000261707 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
SLC6A4-201ENST00000261707 CHMP4AQ9BY43 222 aa13.04□□□□□ -0.32
SLC6A4-201ENST00000261707 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
SLC6A4-201ENST00000261707 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
SLC6A4-201ENST00000261707 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
SLC6A4-201ENST00000261707 CHMP4CQ96CF2 233 aa13.04□□□□□ -0.32
SLC6A4-201ENST00000261707 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
SLC6A4-201ENST00000261707 ARHGAP35Q9NRY4 1499 aa13.03□□□□□ -0.32
SLC6A4-201ENST00000261707 CAVIN1Q6NZI2 390 aaKnown RBP13.03□□□□□ -0.32
SLC6A4-201ENST00000261707 TSPY26PQ9H489 355 aa13.03□□□□□ -0.32
SLC6A4-201ENST00000261707 ZKSCAN2Q63HK3 967 aa13.03□□□□□ -0.32
SLC6A4-201ENST00000261707 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
SLC6A4-201ENST00000261707 TSPYL1Q9H0U9 437 aa13.03□□□□□ -0.32
SLC6A4-201ENST00000261707 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.32
SLC6A4-201ENST00000261707 E9PSI1 815 aa13.02□□□□□ -0.33
SLC6A4-201ENST00000261707 FHAD1B1AJZ9 1412 aa13.02□□□□□ -0.33
SLC6A4-201ENST00000261707 LETM1O95202 739 aaPredicted RBP13.02□□□□□ -0.33
SLC6A4-201ENST00000261707 BCL2L13Q9BXK5 485 aa13.02□□□□□ -0.33
SLC6A4-201ENST00000261707 GRPEL1Q9HAV7 217 aa13.02□□□□□ -0.33
SLC6A4-201ENST00000261707 WWC2Q6AWC2 1192 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 DEF6Q9H4E7 631 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 PKD2Q13563 968 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 PAF1Q8N7H5 531 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 HDAC5Q9UQL6 1122 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 VPS8Q8N3P4 1428 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 ERICH4A6NGS2 130 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 CCDC43Q96MW1 224 aaKnown RBP13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 KIF27Q86VH2 1401 aa13.01□□□□□ -0.33
SLC6A4-201ENST00000261707 NUTM2DQ5VT03 806 aaPredicted RBP13□□□□□ -0.33
SLC6A4-201ENST00000261707 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
SLC6A4-201ENST00000261707 HOOK1Q9UJC3 728 aaKnown RBP13□□□□□ -0.33
SLC6A4-201ENST00000261707 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
SLC6A4-201ENST00000261707 SMC3Q9UQE7 1217 aa12.99□□□□□ -0.33
SLC6A4-201ENST00000261707 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
SLC6A4-201ENST00000261707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.99□□□□□ -0.33
SLC6A4-201ENST00000261707 AEBP1Q8IUX7 1158 aa12.99□□□□□ -0.33
SLC6A4-201ENST00000261707 CAGE1Q8TC20 777 aa12.99□□□□□ -0.33
SLC6A4-201ENST00000261707 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
SLC6A4-201ENST00000261707 ESPNB1AK53 854 aa12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 USP8P40818 1118 aa12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 TRIM5Q9C035 493 aa12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 DHX16O60231 1041 aaKnown RBP12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 PPM1FP49593 454 aaPredicted RBP12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 SKIDA1Q1XH10 827 aa12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 ZMYND15Q9H091 742 aa12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 NAT10Q9H0A0 1025 aaKnown RBP12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 CCP110O43303 1012 aa12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 KIAA0754O94854 1291 aa12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 AXDND1Q5T1B0 1012 aaPredicted RBP12.98□□□□□ -0.33
SLC6A4-201ENST00000261707 PDILTQ8N807 584 aa12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 NAP1L1P55209 391 aaKnown RBP12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 CCDC73Q6ZRK6 1079 aa12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 RB1CC1Q8TDY2 1594 aa12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 MBD3O95983 291 aa12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 INTS3Q68E01 1043 aaKnown RBP12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
SLC6A4-201ENST00000261707 PSME1Q06323 249 aa12.96□□□□□ -0.33
SLC6A4-201ENST00000261707 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
SLC6A4-201ENST00000261707 WASHC2CQ9Y4E1 1318 aa12.96□□□□□ -0.33
SLC6A4-201ENST00000261707 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms