RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ERBB4Q15303 1308 aa16.02■□□□□ 0.16
TMEM260-201ENST00000261556 ROCK2O75116 1388 aaKnown RBP16.02■□□□□ 0.15
TMEM260-201ENST00000261556 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
TMEM260-201ENST00000261556 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
TMEM260-201ENST00000261556 DNAJC2Q99543 621 aaKnown RBP16.01■□□□□ 0.15
TMEM260-201ENST00000261556 KIF3AQ9Y496 699 aa16.01■□□□□ 0.15
TMEM260-201ENST00000261556 DRC7Q8IY82 874 aa16■□□□□ 0.15
TMEM260-201ENST00000261556 SECISBP2LQ93073 1101 aaKnown RBP16■□□□□ 0.15
TMEM260-201ENST00000261556 FOXD4L6Q3SYB3 417 aaPredicted RBP15.99■□□□□ 0.15
TMEM260-201ENST00000261556 FOXD4L3Q6VB84 417 aaPredicted RBP15.99■□□□□ 0.15
TMEM260-201ENST00000261556 ZNF592Q92610 1267 aa15.99■□□□□ 0.15
TMEM260-201ENST00000261556 U2AF1L5P0DN76 240 aaPredicted RBP15.99■□□□□ 0.15
TMEM260-201ENST00000261556 U2AF1Q01081 240 aaKnown RBP eCLIP15.99■□□□□ 0.15
TMEM260-201ENST00000261556 CCDC39Q9UFE4 941 aa15.99■□□□□ 0.15
TMEM260-201ENST00000261556 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
TMEM260-201ENST00000261556 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
TMEM260-201ENST00000261556 HMGN5P82970 282 aaKnown RBP15.99■□□□□ 0.15
TMEM260-201ENST00000261556 IGF1RP08069 1367 aa15.98■□□□□ 0.15
TMEM260-201ENST00000261556 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
TMEM260-201ENST00000261556 NUTM2FA1L443 756 aa15.98■□□□□ 0.15
TMEM260-201ENST00000261556 MCTP1Q6DN14 999 aa15.98■□□□□ 0.15
TMEM260-201ENST00000261556 RIPK4P57078 832 aa15.98■□□□□ 0.15
TMEM260-201ENST00000261556 TBC1D2Q9BYX2 928 aa15.98■□□□□ 0.15
TMEM260-201ENST00000261556 TIGD1Q96MW7 591 aa15.97■□□□□ 0.15
TMEM260-201ENST00000261556 C20orf194Q5TEA3 1177 aa15.97■□□□□ 0.15
TMEM260-201ENST00000261556 NPHP1O15259 732 aa15.97■□□□□ 0.15
TMEM260-201ENST00000261556 TRAK1Q9UPV9 953 aa15.95■□□□□ 0.14
TMEM260-201ENST00000261556 PDE3BQ13370 1112 aa15.95■□□□□ 0.14
TMEM260-201ENST00000261556 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
TMEM260-201ENST00000261556 C22orf23Q9BZE7 217 aa15.95■□□□□ 0.14
TMEM260-201ENST00000261556 TMX1Q9H3N1 280 aa15.95■□□□□ 0.14
TMEM260-201ENST00000261556 RAD54L2Q9Y4B4 1467 aa15.94■□□□□ 0.14
TMEM260-201ENST00000261556 HDAC5Q9UQL6 1122 aa15.94■□□□□ 0.14
TMEM260-201ENST00000261556 TOMM22Q9NS69 142 aa15.94■□□□□ 0.14
TMEM260-201ENST00000261556 C8orf34Q49A92 452 aa15.93■□□□□ 0.14
TMEM260-201ENST00000261556 UTP14CQ5TAP6 766 aaKnown RBP15.93■□□□□ 0.14
TMEM260-201ENST00000261556 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
TMEM260-201ENST00000261556 RTF1Q92541 710 aaKnown RBP15.93■□□□□ 0.14
TMEM260-201ENST00000261556 COG6Q9Y2V7 657 aa15.93■□□□□ 0.14
TMEM260-201ENST00000261556 EID1Q9Y6B2 187 aa15.93■□□□□ 0.14
TMEM260-201ENST00000261556 OS9Q13438 667 aaPredicted RBP15.92■□□□□ 0.14
TMEM260-201ENST00000261556 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
TMEM260-201ENST00000261556 CHMP4CQ96CF2 233 aa15.91■□□□□ 0.14
TMEM260-201ENST00000261556 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
TMEM260-201ENST00000261556 DIAPH3Q9NSV4 1193 aa15.91■□□□□ 0.14
TMEM260-201ENST00000261556 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
TMEM260-201ENST00000261556 CNPY4Q8N129 248 aa15.91■□□□□ 0.14
TMEM260-201ENST00000261556 ST20-MTHFSA0A0A6YYL1 179 aa15.9■□□□□ 0.14
TMEM260-201ENST00000261556 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
TMEM260-201ENST00000261556 TMEM51Q9NW97 253 aa15.89■□□□□ 0.13
TMEM260-201ENST00000261556 GOLGA6L1Q8N7Z2 621 aa15.89■□□□□ 0.13
TMEM260-201ENST00000261556 CALCOCO1Q9P1Z2 691 aa15.89■□□□□ 0.13
TMEM260-201ENST00000261556 U2AF2P26368 475 aaKnown RBP eCLIP15.89■□□□□ 0.133e-6■■■■□ 23.8
TMEM260-201ENST00000261556 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
TMEM260-201ENST00000261556 GTF2A1P52655 376 aaPredicted RBP15.88■□□□□ 0.13
TMEM260-201ENST00000261556 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
TMEM260-201ENST00000261556 CCDC7Q96M83 1385 aa15.87■□□□□ 0.13
TMEM260-201ENST00000261556 ZNF644Q9H582 1327 aaPredicted RBP15.87■□□□□ 0.13
TMEM260-201ENST00000261556 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.13
TMEM260-201ENST00000261556 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
TMEM260-201ENST00000261556 SEC24BO95487 1268 aa15.86■□□□□ 0.13
TMEM260-201ENST00000261556 RALBP1Q15311 655 aa15.86■□□□□ 0.13
TMEM260-201ENST00000261556 KIF7Q2M1P5 1343 aa15.86■□□□□ 0.13
TMEM260-201ENST00000261556 FAM193AP78312 1265 aa15.86■□□□□ 0.13
TMEM260-201ENST00000261556 TNPO1Q92973 898 aaKnown RBP15.85■□□□□ 0.13
TMEM260-201ENST00000261556 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
TMEM260-201ENST00000261556 PRPF40AO75400 957 aaKnown RBP15.85■□□□□ 0.13
TMEM260-201ENST00000261556 GTF2F1P35269 517 aaKnown RBP eCLIP15.85■□□□□ 0.13
TMEM260-201ENST00000261556 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
TMEM260-201ENST00000261556 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
TMEM260-201ENST00000261556 FSD2A1L4K1 749 aa15.84■□□□□ 0.13
TMEM260-201ENST00000261556 GAS2L3Q86XJ1 694 aa15.84■□□□□ 0.13
TMEM260-201ENST00000261556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.84■□□□□ 0.13
TMEM260-201ENST00000261556 TAOK2Q9UL54 1235 aa15.84■□□□□ 0.13
TMEM260-201ENST00000261556 ZNF330Q9Y3S2 320 aaPredicted RBP15.83■□□□□ 0.13
TMEM260-201ENST00000261556 JARID2Q92833 1246 aaPredicted RBP15.83■□□□□ 0.12
TMEM260-201ENST00000261556 RWDD1Q9H446 243 aaPredicted RBP15.83■□□□□ 0.12
TMEM260-201ENST00000261556 PANK3Q9H999 370 aa15.83■□□□□ 0.12
TMEM260-201ENST00000261556 FAM69CQ0P6D2 419 aa15.83■□□□□ 0.12
TMEM260-201ENST00000261556 ZKSCAN5Q9Y2L8 839 aa15.83■□□□□ 0.12
TMEM260-201ENST00000261556 CCDC144AA2RUR9 1427 aa15.83■□□□□ 0.12
TMEM260-201ENST00000261556 APBB1O00213 710 aa15.82■□□□□ 0.12
TMEM260-201ENST00000261556 GOLGA2Q08379 1002 aa15.82■□□□□ 0.12
TMEM260-201ENST00000261556 NOL8Q76FK4 1167 aaKnown RBP15.82■□□□□ 0.12
TMEM260-201ENST00000261556 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
TMEM260-201ENST00000261556 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
TMEM260-201ENST00000261556 ZSCAN20P17040 1043 aaPredicted RBP15.82■□□□□ 0.12
TMEM260-201ENST00000261556 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
TMEM260-201ENST00000261556 TEX35Q5T0J7 233 aa15.81■□□□□ 0.12
TMEM260-201ENST00000261556 TEX2Q8IWB9 1127 aa15.81■□□□□ 0.12
TMEM260-201ENST00000261556 SYAP1Q96A49 352 aaPredicted RBP15.81■□□□□ 0.12
TMEM260-201ENST00000261556 LTV1Q96GA3 475 aaPredicted RBP15.81■□□□□ 0.12
TMEM260-201ENST00000261556 NESP48681 1621 aa15.81■□□□□ 0.12
TMEM260-201ENST00000261556 EIF3AQ14152 1382 aaKnown RBP15.81■□□□□ 0.12
TMEM260-201ENST00000261556 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
TMEM260-201ENST00000261556 CCDC146Q8IYE0 955 aa15.8■□□□□ 0.12
TMEM260-201ENST00000261556 SPC24Q8NBT2 197 aa15.8■□□□□ 0.12
TMEM260-201ENST00000261556 PMFBP1Q8TBY8 1022 aa15.8■□□□□ 0.12
TMEM260-201ENST00000261556 CLGNO14967 610 aa15.8■□□□□ 0.12
TMEM260-201ENST00000261556 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms