RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 AKAP12Q02952 1782 aa9.07□□□□□ -0.96
TOPBP1-201ENST00000260810 KIF15Q9NS87 1388 aa9.07□□□□□ -0.96
TOPBP1-201ENST00000260810 AEBP2Q6ZN18 517 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-201ENST00000260810 ARHGAP31Q2M1Z3 1444 aa9.07□□□□□ -0.96
TOPBP1-201ENST00000260810 PRUNE2Q8WUY3 3088 aa9.06□□□□□ -0.96
TOPBP1-201ENST00000260810 DLC1Q96QB1 1528 aa9.06□□□□□ -0.96
TOPBP1-201ENST00000260810 PEAK1Q9H792 1746 aa9.06□□□□□ -0.96
TOPBP1-201ENST00000260810 PRAG1Q86YV5 1406 aa9.06□□□□□ -0.96
TOPBP1-201ENST00000260810 ARHGAP23Q9P227 1491 aa9.05□□□□□ -0.96
TOPBP1-201ENST00000260810 CCDC184Q52MB2 194 aa9.05□□□□□ -0.96
TOPBP1-201ENST00000260810 QRICH2Q9H0J4 1663 aa9.05□□□□□ -0.96
TOPBP1-201ENST00000260810 RGPD2P0DJD1 1756 aa9.05□□□□□ -0.96
TOPBP1-201ENST00000260810 RIMS1Q86UR5 1692 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-201ENST00000260810 PIK3C2GO75747 1445 aa9.05□□□□□ -0.96
TOPBP1-201ENST00000260810 GPRASP1Q5JY77 1395 aa9.04□□□□□ -0.96
TOPBP1-201ENST00000260810 RRP7BPQ9NSQ0 103 aa9.04□□□□□ -0.96
TOPBP1-201ENST00000260810 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-201ENST00000260810 TESK2Q96S53 571 aa9.04□□□□□ -0.96
TOPBP1-201ENST00000260810 A2ML1A8K2U0 1454 aa9.03□□□□□ -0.96
TOPBP1-201ENST00000260810 SHANK3Q9BYB0 1731 aa9.03□□□□□ -0.96
TOPBP1-201ENST00000260810 SETBP1Q9Y6X0 1596 aa9.03□□□□□ -0.96
TOPBP1-201ENST00000260810 RANBP2P49792 3224 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-201ENST00000260810 TRPM3Q9HCF6 1732 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-201ENST00000260810 RGPD1P0DJD0 1748 aa9.03□□□□□ -0.96
TOPBP1-201ENST00000260810 ADAMTS13Q76LX8 1427 aa9.02□□□□□ -0.97
TOPBP1-201ENST00000260810 CHIC2Q9UKJ5 165 aa9.02□□□□□ -0.97
TOPBP1-201ENST00000260810 ERVK-7P63135 1459 aa9.02□□□□□ -0.97
TOPBP1-201ENST00000260810 GLI3P10071 1580 aa9.02□□□□□ -0.97
TOPBP1-201ENST00000260810 MON2Q7Z3U7 1717 aa9.02□□□□□ -0.97
TOPBP1-201ENST00000260810 RGPD5Q99666 1765 aa9.01□□□□□ -0.97
TOPBP1-201ENST00000260810 PPP1R15AO75807 674 aaPredicted RBP9□□□□□ -0.97
TOPBP1-201ENST00000260810 SLIT1O75093 1534 aa9□□□□□ -0.97
TOPBP1-201ENST00000260810 ABCA3Q99758 1704 aa8.99□□□□□ -0.97
TOPBP1-201ENST00000260810 KDM4FA0A1W2PPD8 638 aa8.99□□□□□ -0.97
TOPBP1-201ENST00000260810 COL18A1P39060 1754 aa8.98□□□□□ -0.97
TOPBP1-201ENST00000260810 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
TOPBP1-201ENST00000260810 RALGAPBQ86X10 1494 aa8.98□□□□□ -0.97
TOPBP1-201ENST00000260810 MPHOSPH9Q99550 1183 aa8.98□□□□□ -0.97
TOPBP1-201ENST00000260810 DLG5Q8TDM6 1919 aa8.97□□□□□ -0.97
TOPBP1-201ENST00000260810 NBPF1Q3BBV0 1214 aa8.97□□□□□ -0.97
TOPBP1-201ENST00000260810 WASHC2AQ641Q2 1341 aa8.96□□□□□ -0.97
TOPBP1-201ENST00000260810 NKTRP30414 1462 aaKnown RBP8.96□□□□□ -0.97
TOPBP1-201ENST00000260810 MYOM2P54296 1465 aa8.96□□□□□ -0.97
TOPBP1-201ENST00000260810 PIK3C2AO00443 1686 aa8.96□□□□□ -0.98
TOPBP1-201ENST00000260810 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-201ENST00000260810 FBXO31Q5XUX0 539 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-201ENST00000260810 NWD1Q149M9 1564 aa8.95□□□□□ -0.98
TOPBP1-201ENST00000260810 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-201ENST00000260810 ADGRB2O60241 1585 aa8.93□□□□□ -0.98
TOPBP1-201ENST00000260810 L3MBTL2Q969R5 705 aa8.92□□□□□ -0.98
TOPBP1-201ENST00000260810 CPS1P31327 1500 aa8.92□□□□□ -0.98
TOPBP1-201ENST00000260810 ALS2Q96Q42 1657 aa8.92□□□□□ -0.98
TOPBP1-201ENST00000260810 DISP3Q9P2K9 1392 aa8.92□□□□□ -0.98
TOPBP1-201ENST00000260810 ADGRF5Q8IZF2 1346 aa8.92□□□□□ -0.98
TOPBP1-201ENST00000260810 CFAP54Q96N23 3096 aa8.91□□□□□ -0.98
TOPBP1-201ENST00000260810 LMO7Q8WWI1 1683 aa8.91□□□□□ -0.98
TOPBP1-201ENST00000260810 SSH2Q76I76 1423 aa8.9□□□□□ -0.98
TOPBP1-201ENST00000260810 HIRIP3Q9BW71 556 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-201ENST00000260810 FMN2Q9NZ56 1722 aa8.9□□□□□ -0.99
TOPBP1-201ENST00000260810 CFDP1Q9UEE9 299 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-201ENST00000260810 MAP2P11137 1827 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-201ENST00000260810 COL3A1P02461 1466 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-201ENST00000260810 LTBP4Q8N2S1 1624 aa8.88□□□□□ -0.99
TOPBP1-201ENST00000260810 PHRF1Q9P1Y6 1649 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-201ENST00000260810 METP08581 1390 aa8.88□□□□□ -0.99
TOPBP1-201ENST00000260810 PLEKHH1Q9ULM0 1364 aa8.88□□□□□ -0.99
TOPBP1-201ENST00000260810 CAMTA1Q9Y6Y1 1673 aa8.88□□□□□ -0.99
TOPBP1-201ENST00000260810 SIPA1L3O60292 1781 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-201ENST00000260810 FAM208AQ9UK61 1670 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-201ENST00000260810 LTKP29376 864 aa8.85□□□□□ -0.99
TOPBP1-201ENST00000260810 SETD1BQ9UPS6 1966 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-201ENST00000260810 ADAMTS7Q9UKP4 1686 aa8.85□□□□□ -0.99
TOPBP1-201ENST00000260810 TECPR2O15040 1411 aa8.85□□□□□ -0.99
TOPBP1-201ENST00000260810 CASZ1Q86V15 1759 aa8.84□□□□□ -0.99
TOPBP1-201ENST00000260810 KIF1AQ12756 1690 aa8.84□□□□□ -0.99
TOPBP1-201ENST00000260810 LRRC7Q96NW7 1537 aa8.84□□□□□ -0.99
TOPBP1-201ENST00000260810 ITGAEP38570 1179 aa8.83□□□□□ -1
TOPBP1-201ENST00000260810 FAM69CQ0P6D2 419 aa8.83□□□□□ -1
TOPBP1-201ENST00000260810 IDI1Q13907 227 aa8.82□□□□□ -1
TOPBP1-201ENST00000260810 NUP155O75694 1391 aa8.82□□□□□ -1
TOPBP1-201ENST00000260810 DIP2AQ14689 1571 aa8.82□□□□□ -1
TOPBP1-201ENST00000260810 KIF20BQ96Q89 1820 aa8.82□□□□□ -1
TOPBP1-201ENST00000260810 PLEKHD1A6NEE1 506 aa8.82□□□□□ -1
TOPBP1-201ENST00000260810 COL6A3P12111 3177 aa8.82□□□□□ -1
TOPBP1-201ENST00000260810 C5orf42Q9H799 3197 aa8.81□□□□□ -1
TOPBP1-201ENST00000260810 TUBGCP6Q96RT7 1819 aa8.81□□□□□ -1
TOPBP1-201ENST00000260810 CARD14Q9BXL6 1004 aa8.81□□□□□ -1
TOPBP1-201ENST00000260810 CDC42BPGQ6DT37 1551 aa8.81□□□□□ -1
TOPBP1-201ENST00000260810 COL16A1Q07092 1604 aaPredicted RBP8.8□□□□□ -1
TOPBP1-201ENST00000260810 ATP7BP35670 1465 aa8.8□□□□□ -1
TOPBP1-201ENST00000260810 PKD2Q13563 968 aa8.8□□□□□ -1
TOPBP1-201ENST00000260810 LTN1O94822 1766 aa8.8□□□□□ -1
TOPBP1-201ENST00000260810 MED1Q15648 1581 aaPredicted RBP8.79□□□□□ -1
TOPBP1-201ENST00000260810 CNTLNQ9NXG0 1405 aa8.79□□□□□ -1
TOPBP1-201ENST00000260810 CEBPAP49715 358 aaPredicted RBP8.79□□□□□ -1
TOPBP1-201ENST00000260810 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
TOPBP1-201ENST00000260810 NCKAP5LQ9HCH0 1330 aa8.78□□□□□ -1
TOPBP1-201ENST00000260810 TRIOO75962 3097 aa8.78□□□□□ -1
TOPBP1-201ENST00000260810 ZMYM3Q14202 1370 aa8.78□□□□□ -1
TOPBP1-201ENST00000260810 ANKRD30AQ9BXX3 1397 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms