RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.54■■■□□ 2.48
PREB-201ENST00000260643 WDR43Q15061 677 aaKnown RBP eCLIP30.54■■■□□ 2.48
PREB-201ENST00000260643 FAM161AQ3B820 660 aa30.53■■■□□ 2.48
PREB-201ENST00000260643 CDCA8Q53HL2 280 aa30.52■■■□□ 2.48
PREB-201ENST00000260643 TRMT2AQ8IZ69 625 aaKnown RBP30.52■■■□□ 2.48
PREB-201ENST00000260643 STAC3Q96MF2 364 aa30.52■■■□□ 2.48
PREB-201ENST00000260643 SCAPERQ9BY12 1400 aa30.51■■■□□ 2.47
PREB-201ENST00000260643 ASXL1Q8IXJ9 1541 aa30.51■■■□□ 2.47
PREB-201ENST00000260643 C8orf34Q49A92 452 aa30.49■■■□□ 2.47
PREB-201ENST00000260643 EIF3AQ14152 1382 aaKnown RBP30.49■■■□□ 2.47
PREB-201ENST00000260643 SLFN5Q08AF3 891 aa30.49■■■□□ 2.47
PREB-201ENST00000260643 IL27Q8NEV9 243 aa30.48■■■□□ 2.47
PREB-201ENST00000260643 SCAF11Q99590 1463 aaKnown RBP30.47■■■□□ 2.47
PREB-201ENST00000260643 ABCC2Q92887 1545 aa30.47■■■□□ 2.47
PREB-201ENST00000260643 NFKBIBQ15653 356 aa30.45■■■□□ 2.46
PREB-201ENST00000260643 SPHKAPQ2M3C7 1700 aa30.44■■■□□ 2.46
PREB-201ENST00000260643 TRPM2O94759 1503 aa30.43■■■□□ 2.46
PREB-201ENST00000260643 GSE1Q14687 1217 aa30.43■■■□□ 2.46
PREB-201ENST00000260643 MYOM1P52179 1685 aa30.41■■■□□ 2.46
PREB-201ENST00000260643 NKTRP30414 1462 aaKnown RBP30.39■■■□□ 2.46
PREB-201ENST00000260643 PTPRTO14522 1441 aa30.39■■■□□ 2.46
PREB-201ENST00000260643 NGEFQ8N5V2 710 aa30.38■■■□□ 2.45
PREB-201ENST00000260643 DAXXQ9UER7 740 aaPredicted RBP30.38■■■□□ 2.45
PREB-201ENST00000260643 PLCH2O75038 1416 aa30.37■■■□□ 2.45
PREB-201ENST00000260643 CEP152O94986 1710 aa30.37■■■□□ 2.45
PREB-201ENST00000260643 SHROOM2Q13796 1616 aa30.37■■■□□ 2.45
PREB-201ENST00000260643 KIAA1210Q9ULL0 1709 aa30.34■■■□□ 2.45
PREB-201ENST00000260643 ABCC1P33527 1531 aa30.33■■■□□ 2.45
PREB-201ENST00000260643 NEURL4Q96JN8 1562 aa30.32■■■□□ 2.44
PREB-201ENST00000260643 SLC4A3P48751 1232 aa30.31■■■□□ 2.44
PREB-201ENST00000260643 E9PSI1 815 aa30.31■■■□□ 2.44
PREB-201ENST00000260643 SLC24A1O60721 1099 aa30.3■■■□□ 2.44
PREB-201ENST00000260643 KDM5AP29375 1690 aaKnown RBP30.29■■■□□ 2.44
PREB-201ENST00000260643 CLTCL1P53675 1640 aa30.28■■■□□ 2.44
PREB-201ENST00000260643 NINLQ9Y2I6 1382 aa30.28■■■□□ 2.44
PREB-201ENST00000260643 RTEL1-TNFRSF6BF6WH68 1400 aa30.28■■■□□ 2.44
PREB-201ENST00000260643 EFCAB2Q5VUJ9 269 aa30.27■■■□□ 2.44
PREB-201ENST00000260643 SPINK5Q9NQ38 1064 aaPredicted RBP30.27■■■□□ 2.44
PREB-201ENST00000260643 DEPDC5O75140 1603 aa30.26■■■□□ 2.43
PREB-201ENST00000260643 APAF1O14727 1248 aa30.25■■■□□ 2.43
PREB-201ENST00000260643 PDE3AQ14432 1141 aa30.25■■■□□ 2.43
PREB-201ENST00000260643 TRAPPC8Q9Y2L5 1435 aa30.25■■■□□ 2.43
PREB-201ENST00000260643 VIRMAQ69YN4 1812 aaKnown RBP30.24■■■□□ 2.43
PREB-201ENST00000260643 CGNL1Q0VF96 1302 aa30.24■■■□□ 2.43
PREB-201ENST00000260643 RGS3P49796 1198 aa30.22■■■□□ 2.43
PREB-201ENST00000260643 CCDC146Q8IYE0 955 aa30.22■■■□□ 2.43
PREB-201ENST00000260643 FRAT1Q92837 279 aaPredicted RBP30.22■■■□□ 2.43
PREB-201ENST00000260643 TET3O43151 1660 aa30.21■■■□□ 2.43
PREB-201ENST00000260643 BCAR3O75815 825 aa30.21■■■□□ 2.43
PREB-201ENST00000260643 ANO8Q9HCE9 1232 aaPredicted RBP30.21■■■□□ 2.43
PREB-201ENST00000260643 ERVK-7P63135 1459 aa30.19■■■□□ 2.42
PREB-201ENST00000260643 VWDEQ8N2E2 1590 aa30.18■■■□□ 2.42
PREB-201ENST00000260643 ZFYVE16Q7Z3T8 1539 aa30.18■■■□□ 2.42
PREB-201ENST00000260643 USP19O94966 1318 aa30.17■■■□□ 2.42
PREB-201ENST00000260643 RTN4Q9NQC3 1192 aaKnown RBP30.17■■■□□ 2.42
PREB-201ENST00000260643 ARAP3Q8WWN8 1544 aa30.17■■■□□ 2.42
PREB-201ENST00000260643 MYOM2P54296 1465 aa30.17■■■□□ 2.42
PREB-201ENST00000260643 POLR3AO14802 1390 aaPredicted RBP30.16■■■□□ 2.42
PREB-201ENST00000260643 MAPK8IP3Q9UPT6 1336 aa30.16■■■□□ 2.42
PREB-201ENST00000260643 IGHDP01880 384 aa30.16■■■□□ 2.42
PREB-201ENST00000260643 BRPF3Q9ULD4 1205 aa30.16■■■□□ 2.42
PREB-201ENST00000260643 CHD1O14646 1710 aa30.16■■■□□ 2.42
PREB-201ENST00000260643 SPAG9O60271 1321 aaKnown RBP30.14■■■□□ 2.42
PREB-201ENST00000260643 FRAT2O75474 233 aaPredicted RBP30.13■■■□□ 2.41
PREB-201ENST00000260643 AAMPQ13685 434 aa30.13■■■□□ 2.41
PREB-201ENST00000260643 MAP3K4Q9Y6R4 1608 aa30.12■■■□□ 2.41
PREB-201ENST00000260643 UHRF1BP1LA0JNW5 1464 aa30.12■■■□□ 2.41
PREB-201ENST00000260643 ZMYM3Q14202 1370 aa30.12■■■□□ 2.41
PREB-201ENST00000260643 CLUAP1Q96AJ1 413 aa30.12■■■□□ 2.41
PREB-201ENST00000260643 CARD14Q9BXL6 1004 aa30.11■■■□□ 2.41
PREB-201ENST00000260643 DMRT2Q9Y5R5 561 aa30.11■■■□□ 2.41
PREB-201ENST00000260643 ZCCHC11Q5TAX3 1644 aaKnown RBP30.11■■■□□ 2.41
PREB-201ENST00000260643 SBNO2Q9Y2G9 1366 aa30.11■■■□□ 2.41
PREB-201ENST00000260643 CENPJQ9HC77 1338 aaPredicted RBP30.11■■■□□ 2.41
PREB-201ENST00000260643 ERCC6L2Q5T890 1561 aa30.1■■■□□ 2.41
PREB-201ENST00000260643 MYO3AQ8NEV4 1616 aa30.09■■■□□ 2.41
PREB-201ENST00000260643 WWC1Q8IX03 1113 aa30.08■■■□□ 2.41
PREB-201ENST00000260643 ABCA6Q8N139 1617 aa30.08■■■□□ 2.41
PREB-201ENST00000260643 KANK1Q14678 1352 aa30.07■■■□□ 2.4
PREB-201ENST00000260643 NLRP1Q9C000 1473 aa30.05■■■□□ 2.4
PREB-201ENST00000260643 NRXN1Q9ULB1 1477 aa30.04■■■□□ 2.4
PREB-201ENST00000260643 CFAP70Q5T0N1 1121 aa30.02■■■□□ 2.4
PREB-201ENST00000260643 PHF23Q9BUL5 403 aaPredicted RBP30.02■■■□□ 2.4
PREB-201ENST00000260643 SHPRHQ149N8 1683 aa30.01■■■□□ 2.4
PREB-201ENST00000260643 INO80Q9ULG1 1556 aaPredicted RBP30.01■■■□□ 2.39
PREB-201ENST00000260643 IFT172Q9UG01 1749 aa30.01■■■□□ 2.39
PREB-201ENST00000260643 BECN1Q14457 450 aa30.01■■■□□ 2.39
PREB-201ENST00000260643 IQSEC2Q5JU85 1478 aa30■■■□□ 2.39
PREB-201ENST00000260643 AFAP1Q8N556 730 aa30■■■□□ 2.39
PREB-201ENST00000260643 COG6Q9Y2V7 657 aa30■■■□□ 2.39
PREB-201ENST00000260643 PMFBP1Q8TBY8 1022 aa29.99■■■□□ 2.39
PREB-201ENST00000260643 PANK1Q8TE04 598 aa29.99■■■□□ 2.39
PREB-201ENST00000260643 ATP7AQ04656 1500 aa29.98■■■□□ 2.39
PREB-201ENST00000260643 SEC24BO95487 1268 aa29.97■■■□□ 2.39
PREB-201ENST00000260643 ADGRF5Q8IZF2 1346 aa29.97■■■□□ 2.39
PREB-201ENST00000260643 RARSP54136 660 aaKnown RBP29.97■■■□□ 2.39
PREB-201ENST00000260643 CANXP27824 592 aaKnown RBP29.96■■■□□ 2.39
PREB-201ENST00000260643 MROH1Q8NDA8 1641 aa29.96■■■□□ 2.39
PREB-201ENST00000260643 NCBP3Q53F19 620 aaKnown RBP29.96■■■□□ 2.39
PREB-201ENST00000260643 SETBP1Q9Y6X0 1596 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms