RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 RRBP1Q9P2E9 1410 aaKnown RBP25.79■■□□□ 1.72
CGREF1-201ENST00000260595 RIMS2Q9UQ26 1411 aa25.77■■□□□ 1.72
CGREF1-201ENST00000260595 PLEKHG1Q9ULL1 1385 aa25.76■■□□□ 1.71
CGREF1-201ENST00000260595 XIRP1Q702N8 1843 aaKnown RBP25.76■■□□□ 1.71
CGREF1-201ENST00000260595 TMEM94Q12767 1356 aa25.74■■□□□ 1.71
CGREF1-201ENST00000260595 HDGFP51858 240 aaKnown RBP25.74■■□□□ 1.71
CGREF1-201ENST00000260595 MYO5BQ9ULV0 1848 aa25.73■■□□□ 1.71
CGREF1-201ENST00000260595 CHGAP10645 457 aaKnown RBP25.72■■□□□ 1.71
CGREF1-201ENST00000260595 BCANQ96GW7 911 aa25.72■■□□□ 1.71
CGREF1-201ENST00000260595 PROSER2Q86WR7 435 aaPredicted RBP25.71■■□□□ 1.71
CGREF1-201ENST00000260595 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
CGREF1-201ENST00000260595 NWD1Q149M9 1564 aa25.7■■□□□ 1.71
CGREF1-201ENST00000260595 PPP1R15AO75807 674 aaPredicted RBP25.7■■□□□ 1.7
CGREF1-201ENST00000260595 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.69■■□□□ 1.7
CGREF1-201ENST00000260595 RBM33Q96EV2 1170 aaKnown RBP25.69■■□□□ 1.7
CGREF1-201ENST00000260595 NKTRP30414 1462 aaKnown RBP25.68■■□□□ 1.7
CGREF1-201ENST00000260595 TBX22Q9Y458 520 aa25.68■■□□□ 1.7
CGREF1-201ENST00000260595 SOCS7O14512 581 aa25.67■■□□□ 1.7
CGREF1-201ENST00000260595 MED1Q15648 1581 aaPredicted RBP25.66■■□□□ 1.7
CGREF1-201ENST00000260595 NAIPQ13075 1403 aa25.66■■□□□ 1.7
CGREF1-201ENST00000260595 NUTM2DQ5VT03 806 aaPredicted RBP25.66■■□□□ 1.7
CGREF1-201ENST00000260595 FAM135BQ49AJ0 1406 aa25.64■■□□□ 1.7
CGREF1-201ENST00000260595 ADAMTS13Q76LX8 1427 aa25.64■■□□□ 1.7
CGREF1-201ENST00000260595 CHD2O14647 1828 aaKnown RBP25.6■■□□□ 1.69
CGREF1-201ENST00000260595 SPHKAPQ2M3C7 1700 aa25.57■■□□□ 1.68
CGREF1-201ENST00000260595 HFM1A2PYH4 1435 aa25.56■■□□□ 1.68
CGREF1-201ENST00000260595 DIP2AQ14689 1571 aa25.56■■□□□ 1.68
CGREF1-201ENST00000260595 MSH6P52701 1360 aa25.56■■□□□ 1.68
CGREF1-201ENST00000260595 PIK3R4Q99570 1358 aa25.56■■□□□ 1.68
CGREF1-201ENST00000260595 NCOA3Q9Y6Q9 1424 aa25.54■■□□□ 1.68
CGREF1-201ENST00000260595 SLAIN2Q9P270 581 aa25.52■■□□□ 1.68
CGREF1-201ENST00000260595 PTPRUQ92729 1446 aa25.51■■□□□ 1.67
CGREF1-201ENST00000260595 TRPM2O94759 1503 aa25.5■■□□□ 1.67
CGREF1-201ENST00000260595 ROBO1Q9Y6N7 1651 aa25.5■■□□□ 1.67
CGREF1-201ENST00000260595 CLTCL1P53675 1640 aa25.49■■□□□ 1.67
CGREF1-201ENST00000260595 ZNF326Q5BKZ1 582 aaKnown RBP25.49■■□□□ 1.67
CGREF1-201ENST00000260595 AMOTL2Q9Y2J4 779 aa25.49■■□□□ 1.67
CGREF1-201ENST00000260595 TRIM52Q96A61 297 aa25.48■■□□□ 1.67
CGREF1-201ENST00000260595 SETBP1Q9Y6X0 1596 aa25.48■■□□□ 1.67
CGREF1-201ENST00000260595 NRXN3Q9Y4C0 1643 aa25.47■■□□□ 1.67
CGREF1-201ENST00000260595 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
CGREF1-201ENST00000260595 C19orf44Q9H6X5 657 aa25.44■■□□□ 1.66
CGREF1-201ENST00000260595 NEXMIFQ5QGS0 1516 aa25.43■■□□□ 1.66
CGREF1-201ENST00000260595 METP08581 1390 aa25.43■■□□□ 1.66
CGREF1-201ENST00000260595 C14orf37Q86TY3 774 aa25.42■■□□□ 1.66
CGREF1-201ENST00000260595 SLC4A1APQ9BWU0 796 aaKnown RBP25.42■■□□□ 1.66
CGREF1-201ENST00000260595 CADPS2Q86UW7 1296 aa25.4■■□□□ 1.66
CGREF1-201ENST00000260595 RGS17Q9UGC6 210 aaPredicted RBP25.4■■□□□ 1.66
CGREF1-201ENST00000260595 XRN1Q8IZH2 1706 aaKnown RBP25.38■■□□□ 1.65
CGREF1-201ENST00000260595 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.38■■□□□ 1.65
CGREF1-201ENST00000260595 ATF3P18847 181 aa25.36■■□□□ 1.65
CGREF1-201ENST00000260595 KIF1BO60333 1816 aa25.35■■□□□ 1.65
CGREF1-201ENST00000260595 VGFO15240 615 aaPredicted RBP25.33■■□□□ 1.65
CGREF1-201ENST00000260595 PHLPP1O60346 1717 aa25.33■■□□□ 1.65
CGREF1-201ENST00000260595 FOXD1Q16676 465 aa25.33■■□□□ 1.65
CGREF1-201ENST00000260595 RPGRIP1LQ68CZ1 1315 aa25.33■■□□□ 1.64
CGREF1-201ENST00000260595 DCCP43146 1447 aa25.31■■□□□ 1.64
CGREF1-201ENST00000260595 JCADQ9P266 1359 aa25.31■■□□□ 1.64
CGREF1-201ENST00000260595 COL16A1Q07092 1604 aaPredicted RBP25.3■■□□□ 1.64
CGREF1-201ENST00000260595 BRINP3Q76B58 766 aa25.28■■□□□ 1.64
CGREF1-201ENST00000260595 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
CGREF1-201ENST00000260595 AHDC1Q5TGY3 1603 aaPredicted RBP25.26■■□□□ 1.63
CGREF1-201ENST00000260595 MST1RQ04912 1400 aa25.25■■□□□ 1.63
CGREF1-201ENST00000260595 ADGRL3Q9HAR2 1447 aa25.24■■□□□ 1.63
CGREF1-201ENST00000260595 SETD1AO15047 1707 aaKnown RBP25.23■■□□□ 1.63
CGREF1-201ENST00000260595 POTEAQ6S8J7 498 aa25.23■■□□□ 1.63
CGREF1-201ENST00000260595 CCDC144AA2RUR9 1427 aa25.21■■□□□ 1.63
CGREF1-201ENST00000260595 PPLO60437 1756 aa25.21■■□□□ 1.63
CGREF1-201ENST00000260595 PTCH1Q13635 1447 aa25.2■■□□□ 1.63
CGREF1-201ENST00000260595 SPATA31E1Q6ZUB1 1445 aa25.2■■□□□ 1.63
CGREF1-201ENST00000260595 PRAG1Q86YV5 1406 aa25.2■■□□□ 1.63
CGREF1-201ENST00000260595 ROBO2Q9HCK4 1378 aa25.2■■□□□ 1.63
CGREF1-201ENST00000260595 SPATA31A6Q5VVP1 1343 aa25.19■■□□□ 1.62
CGREF1-201ENST00000260595 ASXL1Q8IXJ9 1541 aa25.19■■□□□ 1.62
CGREF1-201ENST00000260595 ADGRF5Q8IZF2 1346 aa25.18■■□□□ 1.62
CGREF1-201ENST00000260595 LRP6O75581 1613 aa25.17■■□□□ 1.62
CGREF1-201ENST00000260595 RGL3Q3MIN7 710 aa25.17■■□□□ 1.62
CGREF1-201ENST00000260595 SETD5Q9C0A6 1442 aa25.17■■□□□ 1.62
CGREF1-201ENST00000260595 NALCNQ8IZF0 1738 aa25.17■■□□□ 1.62
CGREF1-201ENST00000260595 ACIN1Q9UKV3 1341 aaKnown RBP25.15■■□□□ 1.62
CGREF1-201ENST00000260595 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
CGREF1-201ENST00000260595 ANKRD30BQ9BXX2 1392 aa25.12■■□□□ 1.61
CGREF1-201ENST00000260595 C1orf167Q5SNV9 1468 aa25.12■■□□□ 1.61
CGREF1-201ENST00000260595 DDX17Q92841 729 aaKnown RBP25.11■■□□□ 1.61
CGREF1-201ENST00000260595 NHSL1Q5SYE7 1610 aa25.11■■□□□ 1.61
CGREF1-201ENST00000260595 LRRC59Q96AG4 307 aaKnown RBP25.08■■□□□ 1.61
CGREF1-201ENST00000260595 RAB3GAP2Q9H2M9 1393 aa25.07■■□□□ 1.6
CGREF1-201ENST00000260595 IFT172Q9UG01 1749 aa25.07■■□□□ 1.6
CGREF1-201ENST00000260595 MEX3CQ5U5Q3 659 aaKnown RBP25.06■■□□□ 1.6
CGREF1-201ENST00000260595 ORAI2Q96SN7 254 aa25.06■■□□□ 1.6
CGREF1-201ENST00000260595 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
CGREF1-201ENST00000260595 TECPR2O15040 1411 aa25.04■■□□□ 1.6
CGREF1-201ENST00000260595 LRPPRCP42704 1394 aaKnown RBP25.04■■□□□ 1.6
CGREF1-201ENST00000260595 NUTM2BA6NNL0 878 aaPredicted RBP25.03■■□□□ 1.6
CGREF1-201ENST00000260595 NUTM2EB1AL46 878 aaPredicted RBP25.03■■□□□ 1.6
CGREF1-201ENST00000260595 TMEM132EQ6IEE7 984 aa25.03■■□□□ 1.6
CGREF1-201ENST00000260595 NUTM2AQ8IVF1 878 aaPredicted RBP25.03■■□□□ 1.6
CGREF1-201ENST00000260595 ABCC11Q96J66 1382 aa25.03■■□□□ 1.6
CGREF1-201ENST00000260595 STK26Q9P289 416 aa25.02■■□□□ 1.6
CGREF1-201ENST00000260595 PNPLA6Q8IY17 1366 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms