RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 EVC2Q86UK5 1308 aa5.85□□□□□ -1.47
RC3H1-201ENST00000258349 ANKRD45Q5TZF3 282 aa5.85□□□□□ -1.47
RC3H1-201ENST00000258349 RUFY1Q96T51 708 aa5.85□□□□□ -1.47
RC3H1-201ENST00000258349 RRBP1Q9P2E9 1410 aaKnown RBP5.85□□□□□ -1.47
RC3H1-201ENST00000258349 NUCB2P80303 420 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 MCTP1Q6DN14 999 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 KIF7Q2M1P5 1343 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 LETM1O95202 739 aaPredicted RBP5.84□□□□□ -1.47
RC3H1-201ENST00000258349 TRIM29Q14134 588 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 FAM43AQ8N2R8 423 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 CSB-PGBD3P0DP91 1061 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 PTPN23Q9H3S7 1636 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 VPS53Q5VIR6 699 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 RNF20Q5VTR2 975 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 CCP110O43303 1012 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 ZKSCAN1P17029 563 aaPredicted RBP5.84□□□□□ -1.47
RC3H1-201ENST00000258349 CDR1P51861 262 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 SYNE3Q6ZMZ3 975 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 ZNF592Q92610 1267 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 RILPL2Q969X0 211 aa5.84□□□□□ -1.47
RC3H1-201ENST00000258349 MARCH6O60337 910 aa5.84□□□□□ -1.48
RC3H1-201ENST00000258349 TCEAL9Q9UHQ7 104 aa5.84□□□□□ -1.48
RC3H1-201ENST00000258349 NASPP49321 788 aaPredicted RBP5.83□□□□□ -1.48
RC3H1-201ENST00000258349 CC2D2AQ9P2K1 1620 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 RRP12Q5JTH9 1297 aaKnown RBP5.83□□□□□ -1.48
RC3H1-201ENST00000258349 EFCAB2Q5VUJ9 269 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 HOMER1Q86YM7 354 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 AMOTL1Q8IY63 956 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 L3MBTL2Q969R5 705 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 CRBNQ96SW2 442 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 TIAM1Q13009 1591 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 MYOM3Q5VTT5 1437 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 CCDC47Q96A33 483 aaKnown RBP5.83□□□□□ -1.48
RC3H1-201ENST00000258349 MYO6Q9UM54 1294 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 EID1Q9Y6B2 187 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 ARHGAP5Q13017 1502 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 INTS3Q68E01 1043 aaKnown RBP5.83□□□□□ -1.48
RC3H1-201ENST00000258349 VSIG10Q8N0Z9 540 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 CHMP5Q9NZZ3 219 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 AMPHP49418 695 aa5.83□□□□□ -1.48
RC3H1-201ENST00000258349 CPLX2Q6PUV4 134 aaKnown RBP5.82□□□□□ -1.48
RC3H1-201ENST00000258349 ANO2Q9NQ90 1003 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 LRRC9Q6ZRR7 1453 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 ADGBQ8N7X0 1667 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 ZNF330Q9Y3S2 320 aaPredicted RBP5.82□□□□□ -1.48
RC3H1-201ENST00000258349 SASS6Q6UVJ0 657 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 DHX8Q14562 1220 aaKnown RBP5.82□□□□□ -1.48
RC3H1-201ENST00000258349 BRD4O60885 1362 aaPredicted RBP5.82□□□□□ -1.48
RC3H1-201ENST00000258349 HSP90B2PQ58FF3 399 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 CLUAP1Q96AJ1 413 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 PANK3Q9H999 370 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 FAM13BQ9NYF5 915 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 DCTN1Q14203 1278 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 G3V3G9 751 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 DCAF8Q5TAQ9 597 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 PLEKHH2Q8IVE3 1493 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 C1orf141Q5JVX7 400 aa5.82□□□□□ -1.48
RC3H1-201ENST00000258349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.82□□□□□ -1.484e-6■■□□□ 11.7
RC3H1-201ENST00000258349 NOL10Q9BSC4 688 aaKnown RBP5.82□□□□□ -1.48
RC3H1-201ENST00000258349 KIF14Q15058 1648 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 FGD6Q6ZV73 1430 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 CCDC66A2RUB6 948 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 PCMTD1Q96MG8 357 aaPredicted RBP5.81□□□□□ -1.48
RC3H1-201ENST00000258349 PDE4CQ08493 712 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 TOMM22Q9NS69 142 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 NEXNQ0ZGT2 675 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 IFT57Q9NWB7 429 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.81□□□□□ -1.48
RC3H1-201ENST00000258349 COG3Q96JB2 828 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 ERC2O15083 957 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 RDXP35241 583 aaKnown RBP5.81□□□□□ -1.48
RC3H1-201ENST00000258349 OLFM4Q6UX06 510 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 KIF1BO60333 1816 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 GGT6Q6P531 493 aa5.81□□□□□ -1.48
RC3H1-201ENST00000258349 ERCC4Q92889 916 aaPredicted RBP5.81□□□□□ -1.48
RC3H1-201ENST00000258349 BICD2Q8TD16 824 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 C9orf78Q9NZ63 289 aaPredicted RBP5.8□□□□□ -1.48
RC3H1-201ENST00000258349 SYNJ1O43426 1573 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 FANCD2Q9BXW9 1451 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 CPLX1O14810 134 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 MRE11P49959 708 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 MNS1Q8NEH6 495 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 PRKRIP1Q9H875 184 aaPredicted RBP5.8□□□□□ -1.48
RC3H1-201ENST00000258349 DZIP1LQ8IYY4 767 aaKnown RBP5.8□□□□□ -1.48
RC3H1-201ENST00000258349 WASHC2CQ9Y4E1 1318 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 CCDC73Q6ZRK6 1079 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 GAPVD1Q14C86 1478 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 MLECQ14165 292 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 FRAT2O75474 233 aaPredicted RBP5.8□□□□□ -1.48
RC3H1-201ENST00000258349 NGDNQ8NEJ9 315 aaKnown RBP5.8□□□□□ -1.48
RC3H1-201ENST00000258349 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 C22orf23Q9BZE7 217 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 CFAP43Q8NDM7 1665 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 WDR97A6NE52 1622 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 IFIT2P09913 472 aaKnown RBP5.8□□□□□ -1.48
RC3H1-201ENST00000258349 SMC3Q9UQE7 1217 aa5.8□□□□□ -1.48
RC3H1-201ENST00000258349 EPS15P42566 896 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 TRDNQ13061 729 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 SAFBQ15424 915 aaKnown RBP eCLIP5.79□□□□□ -1.48
RC3H1-201ENST00000258349 RRP7AQ9Y3A4 280 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms