RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.52
PDE6A-201ENST00000255266 CFAP44Q96MT7 982 aa11.77□□□□□ -0.53
PDE6A-201ENST00000255266 CCER2I3L3R5 266 aa11.77□□□□□ -0.53
PDE6A-201ENST00000255266 ABTB2Q8N961 1025 aa11.76□□□□□ -0.53
PDE6A-201ENST00000255266 NEO1Q92859 1461 aa11.76□□□□□ -0.53
PDE6A-201ENST00000255266 TAF7LQ5H9L4 462 aa11.76□□□□□ -0.53
PDE6A-201ENST00000255266 NLRP6P59044 892 aa11.76□□□□□ -0.53
PDE6A-201ENST00000255266 NUTM2BA6NNL0 878 aaPredicted RBP11.76□□□□□ -0.53
PDE6A-201ENST00000255266 NUTM2EB1AL46 878 aaPredicted RBP11.76□□□□□ -0.53
PDE6A-201ENST00000255266 NUTM2AQ8IVF1 878 aaPredicted RBP11.76□□□□□ -0.53
PDE6A-201ENST00000255266 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
PDE6A-201ENST00000255266 NUP153P49790 1475 aaKnown RBP11.75□□□□□ -0.53
PDE6A-201ENST00000255266 PRAM1Q96QH2 718 aa11.75□□□□□ -0.53
PDE6A-201ENST00000255266 NLRP2Q9NX02 1062 aa11.75□□□□□ -0.53
PDE6A-201ENST00000255266 MSH6P52701 1360 aa11.75□□□□□ -0.53
PDE6A-201ENST00000255266 UHRF1BP1LA0JNW5 1464 aa11.74□□□□□ -0.53
PDE6A-201ENST00000255266 UHRF1BP1Q6BDS2 1440 aa11.74□□□□□ -0.53
PDE6A-201ENST00000255266 PANK3Q9H999 370 aa11.74□□□□□ -0.53
PDE6A-201ENST00000255266 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
PDE6A-201ENST00000255266 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
PDE6A-201ENST00000255266 SLC26A8Q96RN1 970 aa11.74□□□□□ -0.53
PDE6A-201ENST00000255266 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
PDE6A-201ENST00000255266 ATP10AO60312 1499 aa11.74□□□□□ -0.53
PDE6A-201ENST00000255266 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
PDE6A-201ENST00000255266 CHD1O14646 1710 aa11.73□□□□□ -0.53
PDE6A-201ENST00000255266 ABCC5O15440 1437 aa11.73□□□□□ -0.53
PDE6A-201ENST00000255266 GPATCH8Q9UKJ3 1502 aaKnown RBP11.73□□□□□ -0.53
PDE6A-201ENST00000255266 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
PDE6A-201ENST00000255266 TMEM132EQ6IEE7 984 aa11.72□□□□□ -0.53
PDE6A-201ENST00000255266 FKBP8Q14318 412 aa11.71□□□□□ -0.53
PDE6A-201ENST00000255266 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.53
PDE6A-201ENST00000255266 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.53
PDE6A-201ENST00000255266 CFAP70Q5T0N1 1121 aa11.71□□□□□ -0.54
PDE6A-201ENST00000255266 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.54
PDE6A-201ENST00000255266 NGEFQ8N5V2 710 aa11.71□□□□□ -0.54
PDE6A-201ENST00000255266 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.54
PDE6A-201ENST00000255266 CDK19Q9BWU1 502 aa11.71□□□□□ -0.54
PDE6A-201ENST00000255266 CABP2Q9NPB3 220 aa11.71□□□□□ -0.54
PDE6A-201ENST00000255266 PLEKHO1Q53GL0 409 aaPredicted RBP11.7□□□□□ -0.54
PDE6A-201ENST00000255266 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
PDE6A-201ENST00000255266 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
PDE6A-201ENST00000255266 CEBPAP49715 358 aaPredicted RBP11.7□□□□□ -0.54
PDE6A-201ENST00000255266 ZFYVE16Q7Z3T8 1539 aa11.69□□□□□ -0.54
PDE6A-201ENST00000255266 GPATCH3Q96I76 525 aa11.69□□□□□ -0.54
PDE6A-201ENST00000255266 PDE3BQ13370 1112 aa11.68□□□□□ -0.54
PDE6A-201ENST00000255266 UBAP1LF5GYI3 381 aa11.68□□□□□ -0.54
PDE6A-201ENST00000255266 PRDM11Q9NQV5 511 aa11.68□□□□□ -0.54
PDE6A-201ENST00000255266 DDX58O95786 925 aaKnown RBP11.68□□□□□ -0.54
PDE6A-201ENST00000255266 GORABQ5T7V8 394 aa11.68□□□□□ -0.54
PDE6A-201ENST00000255266 MIER1Q8N108 512 aa11.68□□□□□ -0.54
PDE6A-201ENST00000255266 STRN4Q9NRL3 753 aa11.68□□□□□ -0.54
PDE6A-201ENST00000255266 DISP1Q96F81 1524 aa11.67□□□□□ -0.54
PDE6A-201ENST00000255266 HSP90AB1P08238 724 aaKnown RBP11.67□□□□□ -0.54
PDE6A-201ENST00000255266 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
PDE6A-201ENST00000255266 SPG7Q9UQ90 795 aa11.67□□□□□ -0.54
PDE6A-201ENST00000255266 TOM1L2Q6ZVM7 507 aa11.67□□□□□ -0.54
PDE6A-201ENST00000255266 HMMRO75330 724 aa11.67□□□□□ -0.54
PDE6A-201ENST00000255266 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
PDE6A-201ENST00000255266 AMOTL2Q9Y2J4 779 aa11.66□□□□□ -0.54
PDE6A-201ENST00000255266 GAS2L2Q8NHY3 880 aa11.66□□□□□ -0.54
PDE6A-201ENST00000255266 PMFBP1Q8TBY8 1022 aa11.66□□□□□ -0.54
PDE6A-201ENST00000255266 SHANK2Q9UPX8 1470 aa11.65□□□□□ -0.54
PDE6A-201ENST00000255266 NCOA1Q15788 1441 aa11.65□□□□□ -0.55
PDE6A-201ENST00000255266 KCNJ4P48050 445 aa11.64□□□□□ -0.55
PDE6A-201ENST00000255266 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
PDE6A-201ENST00000255266 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
PDE6A-201ENST00000255266 GTF3C3Q9Y5Q9 886 aa11.62□□□□□ -0.55
PDE6A-201ENST00000255266 MCCP23508 829 aa11.62□□□□□ -0.55
PDE6A-201ENST00000255266 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
PDE6A-201ENST00000255266 PHF8Q9UPP1 1060 aa11.62□□□□□ -0.55
PDE6A-201ENST00000255266 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
PDE6A-201ENST00000255266 FGD1P98174 961 aa11.62□□□□□ -0.55
PDE6A-201ENST00000255266 IDI1Q13907 227 aa11.62□□□□□ -0.55
PDE6A-201ENST00000255266 RIMS2Q9UQ26 1411 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 LMTK3Q96Q04 1460 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 FRAT2O75474 233 aaPredicted RBP11.61□□□□□ -0.55
PDE6A-201ENST00000255266 CFAP43Q8NDM7 1665 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 BECN1Q14457 450 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 NUDT16Q96DE0 195 aaKnown RBP11.61□□□□□ -0.55
PDE6A-201ENST00000255266 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 MAGI2Q86UL8 1455 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 NAIPQ13075 1403 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 PNISRQ8TF01 805 aaKnown RBP11.61□□□□□ -0.55
PDE6A-201ENST00000255266 NGLY1Q96IV0 654 aa11.61□□□□□ -0.55
PDE6A-201ENST00000255266 ANP32BQ92688 251 aaKnown RBP11.6□□□□□ -0.55
PDE6A-201ENST00000255266 NOL10Q9BSC4 688 aaKnown RBP11.6□□□□□ -0.55
PDE6A-201ENST00000255266 TRAPPC8Q9Y2L5 1435 aa11.6□□□□□ -0.55
PDE6A-201ENST00000255266 CDK11BP21127 795 aaKnown RBP11.59□□□□□ -0.55
PDE6A-201ENST00000255266 SAMD9Q5K651 1589 aa11.59□□□□□ -0.55
PDE6A-201ENST00000255266 MAPKBP1O60336 1514 aa11.59□□□□□ -0.55
PDE6A-201ENST00000255266 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
PDE6A-201ENST00000255266 WWC1Q8IX03 1113 aa11.59□□□□□ -0.55
PDE6A-201ENST00000255266 ANO8Q9HCE9 1232 aaPredicted RBP11.59□□□□□ -0.55
PDE6A-201ENST00000255266 KIF6Q6ZMV9 814 aa11.59□□□□□ -0.55
PDE6A-201ENST00000255266 GGNBP2Q9H3C7 697 aa11.58□□□□□ -0.55
PDE6A-201ENST00000255266 CABP1Q9NZU7 370 aa11.58□□□□□ -0.55
PDE6A-201ENST00000255266 MYO5CQ9NQX4 1742 aa11.58□□□□□ -0.56
PDE6A-201ENST00000255266 NINLQ9Y2I6 1382 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms