RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
CLUHP3-201ENST00000254109 WASHC2AQ641Q2 1341 aa15.86■□□□□ 0.13
CLUHP3-201ENST00000254109 NUTM2DQ5VT03 806 aaPredicted RBP15.84■□□□□ 0.13
CLUHP3-201ENST00000254109 NEURL4Q96JN8 1562 aa15.84■□□□□ 0.13
CLUHP3-201ENST00000254109 MYO3AQ8NEV4 1616 aa15.83■□□□□ 0.12
CLUHP3-201ENST00000254109 A2ML1A8K2U0 1454 aa15.82■□□□□ 0.12
CLUHP3-201ENST00000254109 NLRP1Q9C000 1473 aa15.82■□□□□ 0.12
CLUHP3-201ENST00000254109 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
CLUHP3-201ENST00000254109 UBR1Q8IWV7 1749 aa15.81■□□□□ 0.12
CLUHP3-201ENST00000254109 IFT172Q9UG01 1749 aa15.81■□□□□ 0.12
CLUHP3-201ENST00000254109 PPLO60437 1756 aa15.8■□□□□ 0.12
CLUHP3-201ENST00000254109 CCDC7Q96M83 1385 aa15.8■□□□□ 0.12
CLUHP3-201ENST00000254109 NEXMIFQ5QGS0 1516 aa15.79■□□□□ 0.12
CLUHP3-201ENST00000254109 ADGRF5Q8IZF2 1346 aa15.79■□□□□ 0.12
CLUHP3-201ENST00000254109 SENP3Q9H4L4 574 aaPredicted RBP15.79■□□□□ 0.12
CLUHP3-201ENST00000254109 UHRF1BP1Q6BDS2 1440 aa15.78■□□□□ 0.12
CLUHP3-201ENST00000254109 RPGRIP1LQ68CZ1 1315 aa15.78■□□□□ 0.12
CLUHP3-201ENST00000254109 CEP170BQ9Y4F5 1589 aaPredicted RBP15.77■□□□□ 0.12
CLUHP3-201ENST00000254109 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.12
CLUHP3-201ENST00000254109 POLR1AO95602 1720 aaPredicted RBP15.77■□□□□ 0.11
CLUHP3-201ENST00000254109 KDM5AP29375 1690 aaKnown RBP15.76■□□□□ 0.11
CLUHP3-201ENST00000254109 RIMS2Q9UQ26 1411 aa15.76■□□□□ 0.11
CLUHP3-201ENST00000254109 C11orf95C9JLR9 678 aaPredicted RBP15.75■□□□□ 0.11
CLUHP3-201ENST00000254109 MYOM2P54296 1465 aa15.75■□□□□ 0.11
CLUHP3-201ENST00000254109 RALGAPBQ86X10 1494 aa15.74■□□□□ 0.11
CLUHP3-201ENST00000254109 USP47Q96K76 1375 aa15.74■□□□□ 0.11
CLUHP3-201ENST00000254109 TMEM2Q9UHN6 1383 aa15.74■□□□□ 0.11
CLUHP3-201ENST00000254109 ZNF142P52746 1687 aaPredicted RBP15.74■□□□□ 0.11
CLUHP3-201ENST00000254109 ZFYVE9O95405 1425 aa15.73■□□□□ 0.11
CLUHP3-201ENST00000254109 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
CLUHP3-201ENST00000254109 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
CLUHP3-201ENST00000254109 KIF7Q2M1P5 1343 aa15.73■□□□□ 0.11
CLUHP3-201ENST00000254109 STAC3Q96MF2 364 aa15.73■□□□□ 0.11
CLUHP3-201ENST00000254109 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
CLUHP3-201ENST00000254109 NBPF1Q3BBV0 1214 aa15.72■□□□□ 0.11
CLUHP3-201ENST00000254109 LTKP29376 864 aa15.71■□□□□ 0.11
CLUHP3-201ENST00000254109 CFAP70Q5T0N1 1121 aa15.71■□□□□ 0.11
CLUHP3-201ENST00000254109 TRPM1Q7Z4N2 1603 aa15.71■□□□□ 0.11
CLUHP3-201ENST00000254109 TXNDC2Q86VQ3 553 aa15.7■□□□□ 0.1
CLUHP3-201ENST00000254109 CARD11Q9BXL7 1154 aa15.7■□□□□ 0.1
CLUHP3-201ENST00000254109 PIK3C2GO75747 1445 aa15.7■□□□□ 0.1
CLUHP3-201ENST00000254109 SLIT1O75093 1534 aa15.69■□□□□ 0.1
CLUHP3-201ENST00000254109 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.69■□□□□ 0.1
CLUHP3-201ENST00000254109 ARHGAP23Q9P227 1491 aa15.69■□□□□ 0.1
CLUHP3-201ENST00000254109 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
CLUHP3-201ENST00000254109 ROCK2O75116 1388 aaKnown RBP15.68■□□□□ 0.1
CLUHP3-201ENST00000254109 HDGFP51858 240 aaKnown RBP15.68■□□□□ 0.1
CLUHP3-201ENST00000254109 EID1Q9Y6B2 187 aa15.67■□□□□ 0.1
CLUHP3-201ENST00000254109 C14orf93Q9H972 538 aaKnown RBP15.66■□□□□ 0.1
CLUHP3-201ENST00000254109 HSPA2P54652 639 aa15.66■□□□□ 0.1
CLUHP3-201ENST00000254109 BCANQ96GW7 911 aa15.66■□□□□ 0.1
CLUHP3-201ENST00000254109 PRKRIP1Q9H875 184 aaPredicted RBP15.66■□□□□ 0.1
CLUHP3-201ENST00000254109 KIAA1210Q9ULL0 1709 aa15.65■□□□□ 0.1
CLUHP3-201ENST00000254109 TMEM132EQ6IEE7 984 aa15.64■□□□□ 0.09
CLUHP3-201ENST00000254109 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
CLUHP3-201ENST00000254109 SCAF11Q99590 1463 aaKnown RBP15.64■□□□□ 0.09
CLUHP3-201ENST00000254109 IQGAP1P46940 1657 aa15.64■□□□□ 0.09
CLUHP3-201ENST00000254109 NRXN3Q9Y4C0 1643 aa15.64■□□□□ 0.09
CLUHP3-201ENST00000254109 ANKLE2Q86XL3 938 aa15.64■□□□□ 0.09
CLUHP3-201ENST00000254109 LMTK3Q96Q04 1460 aa15.64■□□□□ 0.09
CLUHP3-201ENST00000254109 ALKQ9UM73 1620 aa15.63■□□□□ 0.09
CLUHP3-201ENST00000254109 POLR3GLQ9BT43 218 aa15.63■□□□□ 0.09
CLUHP3-201ENST00000254109 PLEKHG1Q9ULL1 1385 aa15.63■□□□□ 0.09
CLUHP3-201ENST00000254109 NCKAP5LQ9HCH0 1330 aa15.62■□□□□ 0.09
CLUHP3-201ENST00000254109 GPRASP1Q5JY77 1395 aa15.62■□□□□ 0.09
CLUHP3-201ENST00000254109 SETBP1Q9Y6X0 1596 aa15.61■□□□□ 0.09
CLUHP3-201ENST00000254109 SLC26A8Q96RN1 970 aa15.61■□□□□ 0.09
CLUHP3-201ENST00000254109 ADGRB1O14514 1584 aa15.6■□□□□ 0.09
CLUHP3-201ENST00000254109 LAMC1P11047 1609 aa15.6■□□□□ 0.09
CLUHP3-201ENST00000254109 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLUHP3-201ENST00000254109 SETD1AO15047 1707 aaKnown RBP15.6■□□□□ 0.09
CLUHP3-201ENST00000254109 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
CLUHP3-201ENST00000254109 ASXL1Q8IXJ9 1541 aa15.6■□□□□ 0.09
CLUHP3-201ENST00000254109 ST20-MTHFSA0A0A6YYL1 179 aa15.59■□□□□ 0.09
CLUHP3-201ENST00000254109 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
CLUHP3-201ENST00000254109 METP08581 1390 aa15.58■□□□□ 0.08
CLUHP3-201ENST00000254109 STK26Q9P289 416 aa15.57■□□□□ 0.08
CLUHP3-201ENST00000254109 TRAK1Q9UPV9 953 aa15.57■□□□□ 0.08
CLUHP3-201ENST00000254109 NEFLP07196 543 aa15.57■□□□□ 0.08
CLUHP3-201ENST00000254109 MED14O60244 1454 aa15.56■□□□□ 0.08
CLUHP3-201ENST00000254109 NPHP4O75161 1426 aaPredicted RBP15.55■□□□□ 0.08
CLUHP3-201ENST00000254109 CCDC184Q52MB2 194 aa15.54■□□□□ 0.08
CLUHP3-201ENST00000254109 TBX22Q9Y458 520 aa15.54■□□□□ 0.08
CLUHP3-201ENST00000254109 YTHDC2Q9H6S0 1430 aaKnown RBP15.53■□□□□ 0.08
CLUHP3-201ENST00000254109 STRCQ7RTU9 1775 aa15.53■□□□□ 0.08
CLUHP3-201ENST00000254109 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.08
CLUHP3-201ENST00000254109 FKBP8Q14318 412 aa15.52■□□□□ 0.07
CLUHP3-201ENST00000254109 PTPRUQ92729 1446 aa15.51■□□□□ 0.07
CLUHP3-201ENST00000254109 LRPPRCP42704 1394 aaKnown RBP15.5■□□□□ 0.07
CLUHP3-201ENST00000254109 DIP2AQ14689 1571 aa15.5■□□□□ 0.07
CLUHP3-201ENST00000254109 ARHGEF28Q8N1W1 1705 aaKnown RBP15.5■□□□□ 0.07
CLUHP3-201ENST00000254109 SAFB2Q14151 953 aaKnown RBP eCLIP15.49■□□□□ 0.07
CLUHP3-201ENST00000254109 KTN1Q86UP2 1357 aaKnown RBP15.48■□□□□ 0.07
CLUHP3-201ENST00000254109 TESK2Q96S53 571 aa15.48■□□□□ 0.07
CLUHP3-201ENST00000254109 AMOTL2Q9Y2J4 779 aa15.48■□□□□ 0.07
CLUHP3-201ENST00000254109 EIF3AQ14152 1382 aaKnown RBP15.48■□□□□ 0.07
CLUHP3-201ENST00000254109 ABCC11Q96J66 1382 aa15.48■□□□□ 0.07
CLUHP3-201ENST00000254109 WAPLQ7Z5K2 1190 aa15.47■□□□□ 0.07
CLUHP3-201ENST00000254109 PRAM1Q96QH2 718 aa15.47■□□□□ 0.07
CLUHP3-201ENST00000254109 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms