RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 IPO7O95373 1038 aaKnown RBP16.08■□□□□ 0.16
PCDHGA3-201ENST00000253812 CREBRFQ8IUR6 639 aa16.07■□□□□ 0.16
PCDHGA3-201ENST00000253812 PDE4CQ08493 712 aa16.06■□□□□ 0.16
PCDHGA3-201ENST00000253812 ESPNB1AK53 854 aa16.06■□□□□ 0.16
PCDHGA3-201ENST00000253812 USP8P40818 1118 aa16.06■□□□□ 0.16
PCDHGA3-201ENST00000253812 CHMP4CQ96CF2 233 aa16.06■□□□□ 0.16
PCDHGA3-201ENST00000253812 DEF6Q9H4E7 631 aa16.06■□□□□ 0.16
PCDHGA3-201ENST00000253812 ERCC4Q92889 916 aaPredicted RBP16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 TAF7LQ5H9L4 462 aa16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 GPATCH3Q96I76 525 aa16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 TSPYL1Q9H0U9 437 aa16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 ZMYND15Q9H091 742 aa16.05■□□□□ 0.16
PCDHGA3-201ENST00000253812 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
PCDHGA3-201ENST00000253812 CRBNQ96SW2 442 aa16.04■□□□□ 0.16
PCDHGA3-201ENST00000253812 TPD52L1Q16890 204 aaPredicted RBP16.04■□□□□ 0.16
PCDHGA3-201ENST00000253812 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
PCDHGA3-201ENST00000253812 H3BQV1 296 aa16.03■□□□□ 0.16
PCDHGA3-201ENST00000253812 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA3-201ENST00000253812 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCDHGA3-201ENST00000253812 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
PCDHGA3-201ENST00000253812 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
PCDHGA3-201ENST00000253812 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
PCDHGA3-201ENST00000253812 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
PCDHGA3-201ENST00000253812 RASSF8Q8NHQ8 419 aa16.02■□□□□ 0.16
PCDHGA3-201ENST00000253812 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
PCDHGA3-201ENST00000253812 PES1O00541 588 aaKnown RBP16.02■□□□□ 0.15
PCDHGA3-201ENST00000253812 PDCL3Q9H2J4 239 aa16.02■□□□□ 0.15
PCDHGA3-201ENST00000253812 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.15
PCDHGA3-201ENST00000253812 CUX1P39880 1505 aa16.02■□□□□ 0.15
PCDHGA3-201ENST00000253812 REC8O95072 547 aa16.01■□□□□ 0.15
PCDHGA3-201ENST00000253812 HDAC5Q9UQL6 1122 aa16.01■□□□□ 0.15
PCDHGA3-201ENST00000253812 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
PCDHGA3-201ENST00000253812 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
PCDHGA3-201ENST00000253812 UQCRHLA0A096LP55 91 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 UQCRHP07919 91 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 MCTP1Q6DN14 999 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 MYOM3Q5VTT5 1437 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 TOPBP1Q92547 1522 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
PCDHGA3-201ENST00000253812 CHMP4AQ9BY43 222 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 PLIN1O60240 522 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 FAM184AQ8NB25 1140 aa16■□□□□ 0.15
PCDHGA3-201ENST00000253812 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
PCDHGA3-201ENST00000253812 RTF1Q92541 710 aaKnown RBP15.99■□□□□ 0.15
PCDHGA3-201ENST00000253812 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
PCDHGA3-201ENST00000253812 MBD3O95983 291 aa15.99■□□□□ 0.15
PCDHGA3-201ENST00000253812 PRXQ9BXM0 1461 aa15.99■□□□□ 0.15
PCDHGA3-201ENST00000253812 PDCL2Q8N4E4 241 aa15.98■□□□□ 0.15
PCDHGA3-201ENST00000253812 CASKIN1Q8WXD9 1431 aa15.98■□□□□ 0.15
PCDHGA3-201ENST00000253812 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
PCDHGA3-201ENST00000253812 TRAK1Q9UPV9 953 aa15.98■□□□□ 0.15
PCDHGA3-201ENST00000253812 RNF214Q8ND24 703 aa15.98■□□□□ 0.15
PCDHGA3-201ENST00000253812 C22orf23Q9BZE7 217 aa15.97■□□□□ 0.15
PCDHGA3-201ENST00000253812 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA3-201ENST00000253812 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
PCDHGA3-201ENST00000253812 BICD2Q8TD16 824 aa15.97■□□□□ 0.15
PCDHGA3-201ENST00000253812 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
PCDHGA3-201ENST00000253812 ANKRD20A12PQ8NF67 263 aa15.96■□□□□ 0.15
PCDHGA3-201ENST00000253812 ANKRD45Q5TZF3 282 aa15.96■□□□□ 0.15
PCDHGA3-201ENST00000253812 GRPEL1Q9HAV7 217 aa15.95■□□□□ 0.14
PCDHGA3-201ENST00000253812 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
PCDHGA3-201ENST00000253812 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
PCDHGA3-201ENST00000253812 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
PCDHGA3-201ENST00000253812 EIF3AQ14152 1382 aaKnown RBP15.95■□□□□ 0.14
PCDHGA3-201ENST00000253812 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
PCDHGA3-201ENST00000253812 CCDC112Q8NEF3 446 aa15.94■□□□□ 0.14
PCDHGA3-201ENST00000253812 LETM1O95202 739 aaPredicted RBP15.94■□□□□ 0.14
PCDHGA3-201ENST00000253812 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
PCDHGA3-201ENST00000253812 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
PCDHGA3-201ENST00000253812 KIAA0754O94854 1291 aa15.93■□□□□ 0.14
PCDHGA3-201ENST00000253812 ZKSCAN2Q63HK3 967 aa15.92■□□□□ 0.14
PCDHGA3-201ENST00000253812 COG6Q9Y2V7 657 aa15.92■□□□□ 0.14
PCDHGA3-201ENST00000253812 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
PCDHGA3-201ENST00000253812 E9PSI1 815 aa15.92■□□□□ 0.14
PCDHGA3-201ENST00000253812 CCP110O43303 1012 aa15.92■□□□□ 0.14
PCDHGA3-201ENST00000253812 ZSCAN30Q86W11 494 aa15.92■□□□□ 0.14
PCDHGA3-201ENST00000253812 CALCOCO1Q9P1Z2 691 aa15.92■□□□□ 0.14
PCDHGA3-201ENST00000253812 KIF15Q9NS87 1388 aa15.92■□□□□ 0.14
PCDHGA3-201ENST00000253812 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
PCDHGA3-201ENST00000253812 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
PCDHGA3-201ENST00000253812 PLCD4Q9BRC7 762 aa15.9■□□□□ 0.14
PCDHGA3-201ENST00000253812 TRIM5Q9C035 493 aa15.9■□□□□ 0.14
PCDHGA3-201ENST00000253812 TSPY26PQ9H489 355 aa15.9■□□□□ 0.14
PCDHGA3-201ENST00000253812 HOOK1Q9UJC3 728 aaKnown RBP15.9■□□□□ 0.14
PCDHGA3-201ENST00000253812 IFT140Q96RY7 1462 aa15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 NUTM2FA1L443 756 aa15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 AXDND1Q5T1B0 1012 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 CCDC73Q6ZRK6 1079 aa15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 NAT10Q9H0A0 1025 aaKnown RBP15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 RILPL2Q969X0 211 aa15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 AAMPQ13685 434 aa15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 CCDC146Q8IYE0 955 aa15.89■□□□□ 0.13
PCDHGA3-201ENST00000253812 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms