RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 DEF6Q9H4E7 631 aa10.49□□□□□ -0.73
USP6-201ENST00000250066 TRDNQ13061 729 aa10.48□□□□□ -0.73
USP6-201ENST00000250066 OLFM4Q6UX06 510 aa10.48□□□□□ -0.73
USP6-201ENST00000250066 CCDC97Q96F63 343 aaPredicted RBP10.48□□□□□ -0.73
USP6-201ENST00000250066 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
USP6-201ENST00000250066 WWC2Q6AWC2 1192 aa10.48□□□□□ -0.73
USP6-201ENST00000250066 SEPT11Q9NVA2 429 aaKnown RBP10.48□□□□□ -0.73
USP6-201ENST00000250066 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
USP6-201ENST00000250066 CGNL1Q0VF96 1302 aa10.47□□□□□ -0.73
USP6-201ENST00000250066 RUFY2Q8WXA3 655 aa10.47□□□□□ -0.73
USP6-201ENST00000250066 KANK1Q14678 1352 aa10.47□□□□□ -0.73
USP6-201ENST00000250066 SAFBQ15424 915 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP6-201ENST00000250066 PKNOX2Q96KN3 472 aa10.47□□□□□ -0.73
USP6-201ENST00000250066 BCCIPQ9P287 314 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP6-201ENST00000250066 ERICH2A1L162 156 aa10.47□□□□□ -0.73
USP6-201ENST00000250066 SYCP1Q15431 976 aa10.47□□□□□ -0.73
USP6-201ENST00000250066 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
USP6-201ENST00000250066 CLUAP1Q96AJ1 413 aa10.46□□□□□ -0.73
USP6-201ENST00000250066 GIMAP7Q8NHV1 300 aa10.46□□□□□ -0.73
USP6-201ENST00000250066 BAZ1BQ9UIG0 1483 aaKnown RBP10.46□□□□□ -0.73
USP6-201ENST00000250066 RALBP1Q15311 655 aa10.46□□□□□ -0.74
USP6-201ENST00000250066 CCDC73Q6ZRK6 1079 aa10.46□□□□□ -0.74
USP6-201ENST00000250066 NFXL1Q6ZNB6 911 aa10.45□□□□□ -0.74
USP6-201ENST00000250066 VPS37DQ86XT2 251 aa10.45□□□□□ -0.74
USP6-201ENST00000250066 GBP2P32456 591 aaPredicted RBP10.45□□□□□ -0.74
USP6-201ENST00000250066 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
USP6-201ENST00000250066 CCAR1Q8IX12 1150 aaKnown RBP10.45□□□□□ -0.74
USP6-201ENST00000250066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP6-201ENST00000250066 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
USP6-201ENST00000250066 REC8O95072 547 aa10.45□□□□□ -0.74
USP6-201ENST00000250066 ANKRD45Q5TZF3 282 aa10.45□□□□□ -0.74
USP6-201ENST00000250066 STK26Q9P289 416 aa10.45□□□□□ -0.74
USP6-201ENST00000250066 SMARCE1Q969G3 411 aa10.44□□□□□ -0.74
USP6-201ENST00000250066 CENPHQ9H3R5 247 aa10.44□□□□□ -0.74
USP6-201ENST00000250066 TAX1BP1Q86VP1 789 aa10.44□□□□□ -0.74
USP6-201ENST00000250066 LMOD3Q0VAK6 560 aa10.44□□□□□ -0.74
USP6-201ENST00000250066 CLIP1P30622 1438 aa10.44□□□□□ -0.74
USP6-201ENST00000250066 RNF20Q5VTR2 975 aa10.44□□□□□ -0.74
USP6-201ENST00000250066 CENPJQ9HC77 1338 aaPredicted RBP10.44□□□□□ -0.74
USP6-201ENST00000250066 TMEM132AQ24JP5 1023 aa10.43□□□□□ -0.74
USP6-201ENST00000250066 GOLGA6L10A0A0M3HER8 536 aa10.43□□□□□ -0.74
USP6-201ENST00000250066 CCP110O43303 1012 aa10.43□□□□□ -0.74
USP6-201ENST00000250066 ANO2Q9NQ90 1003 aa10.43□□□□□ -0.74
USP6-201ENST00000250066 CHMP5Q9NZZ3 219 aa10.43□□□□□ -0.74
USP6-201ENST00000250066 CCDC39Q9UFE4 941 aa10.43□□□□□ -0.74
USP6-201ENST00000250066 EIF3AQ14152 1382 aaKnown RBP10.42□□□□□ -0.74
USP6-201ENST00000250066 VPS37CA5D8V6 355 aaPredicted RBP10.42□□□□□ -0.74
USP6-201ENST00000250066 RABEP1Q15276 862 aa10.42□□□□□ -0.74
USP6-201ENST00000250066 BRMS1Q9HCU9 246 aa10.42□□□□□ -0.74
USP6-201ENST00000250066 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
USP6-201ENST00000250066 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
USP6-201ENST00000250066 SDF4Q9BRK5 362 aa10.41□□□□□ -0.74
USP6-201ENST00000250066 LUC7LQ9NQ29 371 aaKnown RBP10.41□□□□□ -0.74
USP6-201ENST00000250066 NASPP49321 788 aaPredicted RBP10.41□□□□□ -0.74
USP6-201ENST00000250066 SMC3Q9UQE7 1217 aa10.41□□□□□ -0.74
USP6-201ENST00000250066 FILIP1LQ4L180 1135 aa10.41□□□□□ -0.74
USP6-201ENST00000250066 EIF3JO75822 258 aaKnown RBP10.4□□□□□ -0.74
USP6-201ENST00000250066 MAGEC2Q9UBF1 373 aaPredicted RBP10.4□□□□□ -0.74
USP6-201ENST00000250066 CEP63Q96MT8 703 aa10.4□□□□□ -0.74
USP6-201ENST00000250066 PPM1EQ8WY54 764 aa10.4□□□□□ -0.74
USP6-201ENST00000250066 XBP1P17861 261 aa10.4□□□□□ -0.75
USP6-201ENST00000250066 NUCB2P80303 420 aa10.39□□□□□ -0.75
USP6-201ENST00000250066 SIN3AQ96ST3 1273 aa10.39□□□□□ -0.75
USP6-201ENST00000250066 ZNHIT6Q9NWK9 470 aaKnown RBP10.39□□□□□ -0.75
USP6-201ENST00000250066 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
USP6-201ENST00000250066 CENPQQ7L2Z9 268 aaPredicted RBP10.39□□□□□ -0.75
USP6-201ENST00000250066 CCDC112Q8NEF3 446 aa10.39□□□□□ -0.75
USP6-201ENST00000250066 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
USP6-201ENST00000250066 FOSBP53539 338 aa10.39□□□□□ -0.75
USP6-201ENST00000250066 CCDC181Q5TID7 509 aa10.39□□□□□ -0.75
USP6-201ENST00000250066 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
USP6-201ENST00000250066 SMC2O95347 1197 aa10.38□□□□□ -0.75
USP6-201ENST00000250066 CCDC91Q7Z6B0 441 aa10.38□□□□□ -0.75
USP6-201ENST00000250066 STAMBPO95630 424 aa10.38□□□□□ -0.75
USP6-201ENST00000250066 AMPHP49418 695 aa10.38□□□□□ -0.75
USP6-201ENST00000250066 BRPF1P55201 1214 aaPredicted RBP10.38□□□□□ -0.75
USP6-201ENST00000250066 MLECQ14165 292 aa10.38□□□□□ -0.75
USP6-201ENST00000250066 SLC26A8Q96RN1 970 aa10.38□□□□□ -0.75
USP6-201ENST00000250066 MSH5O43196 834 aa10.38□□□□□ -0.75
USP6-201ENST00000250066 SPATA24Q86W54 205 aa10.38□□□□□ -0.75
USP6-201ENST00000250066 HSP90AB4PQ58FF6 505 aa10.37□□□□□ -0.75
USP6-201ENST00000250066 MAPK8IP2Q13387 824 aaPredicted RBP10.37□□□□□ -0.75
USP6-201ENST00000250066 RALYLQ86SE5 291 aaKnown RBP10.37□□□□□ -0.75
USP6-201ENST00000250066 CCDC146Q8IYE0 955 aa10.37□□□□□ -0.75
USP6-201ENST00000250066 TXLNBQ8N3L3 684 aa10.36□□□□□ -0.75
USP6-201ENST00000250066 CDK5RAP3Q96JB5 506 aa10.36□□□□□ -0.75
USP6-201ENST00000250066 LRRCC1Q9C099 1032 aa10.36□□□□□ -0.75
USP6-201ENST00000250066 PDCL3Q9H2J4 239 aa10.36□□□□□ -0.75
USP6-201ENST00000250066 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
USP6-201ENST00000250066 IFIT2P09913 472 aaKnown RBP10.36□□□□□ -0.75
USP6-201ENST00000250066 TXLNAP40222 546 aa10.36□□□□□ -0.75
USP6-201ENST00000250066 KINO60870 393 aaKnown RBP10.36□□□□□ -0.75
USP6-201ENST00000250066 DDX23Q9BUQ8 820 aaKnown RBP10.36□□□□□ -0.75
USP6-201ENST00000250066 CFAP57Q96MR6 1250 aa10.36□□□□□ -0.75
USP6-201ENST00000250066 IKQ13123 557 aaPredicted RBP10.36□□□□□ -0.75
USP6-201ENST00000250066 ERLIN1O75477 346 aa10.35□□□□□ -0.75
USP6-201ENST00000250066 RSPH4AQ5TD94 716 aa10.35□□□□□ -0.75
USP6-201ENST00000250066 TERF2IPQ9NYB0 399 aa10.35□□□□□ -0.75
USP6-201ENST00000250066 ROCK2O75116 1388 aaKnown RBP10.35□□□□□ -0.75
USP6-201ENST00000250066 LETM1O95202 739 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms